RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 TMEM182Q6ZP80 229 aaPredicted RBP9.89□□□□□ -0.83
SLIRP-210ENST00000557431 OR11H7Q8NGC8 314 aa9.89□□□□□ -0.83
SLIRP-210ENST00000557431 OR1S1Q8NH92 325 aa9.89□□□□□ -0.83
SLIRP-210ENST00000557431 IGF2BP2-AS1Q96M15 143 aa9.89□□□□□ -0.83
SLIRP-210ENST00000557431 CLUHP3Q96NS8 147 aa9.89□□□□□ -0.83
SLIRP-210ENST00000557431 RSG1Q9BU20 258 aa9.89□□□□□ -0.83
SLIRP-210ENST00000557431 RPRMQ9NS64 109 aa9.89□□□□□ -0.83
SLIRP-210ENST00000557431 A0A0B4J2A0 478 aa9.88□□□□□ -0.83
SLIRP-210ENST00000557431 NBDYA0A0U1RRE5 68 aa9.88□□□□□ -0.83
SLIRP-210ENST00000557431 NAP1L6A6NFF2 107 aa9.88□□□□□ -0.83
SLIRP-210ENST00000557431 SNRPGP15A8MWD9 76 aa9.88□□□□□ -0.83
SLIRP-210ENST00000557431 F5H768 121 aa9.88□□□□□ -0.83
SLIRP-210ENST00000557431 ANXA3P12429 323 aa9.88□□□□□ -0.83
SLIRP-210ENST00000557431 CNN1P51911 297 aaKnown RBP9.88□□□□□ -0.83
SLIRP-210ENST00000557431 TMEM128Q5BJH2 165 aa9.88□□□□□ -0.83
SLIRP-210ENST00000557431 TMED4Q7Z7H5 227 aa9.88□□□□□ -0.83
SLIRP-210ENST00000557431 C6orf223Q8N319 242 aa9.88□□□□□ -0.83
SLIRP-210ENST00000557431 C15orf53Q8NAA6 179 aa9.88□□□□□ -0.83
SLIRP-210ENST00000557431 ZNRF2Q8NHG8 242 aa9.88□□□□□ -0.83
SLIRP-210ENST00000557431 SLC25A39Q9BZJ4 359 aaPredicted RBP9.88□□□□□ -0.83
SLIRP-210ENST00000557431 SHPKQ9UHJ6 478 aa9.88□□□□□ -0.83
SLIRP-210ENST00000557431 TRAV8-2A0A0B4J237 113 aa9.87□□□□□ -0.83
SLIRP-210ENST00000557431 PLAC8L1A1L4L8 177 aa9.87□□□□□ -0.83
SLIRP-210ENST00000557431 A6NHS1 94 aa9.87□□□□□ -0.83
SLIRP-210ENST00000557431 A8MTW9 85 aa9.87□□□□□ -0.83
SLIRP-210ENST00000557431 IL7P13232 177 aa9.87□□□□□ -0.83
SLIRP-210ENST00000557431 GPX4P36969 197 aaPredicted RBP9.87□□□□□ -0.83
SLIRP-210ENST00000557431 SRPXP78539 464 aa9.87□□□□□ -0.83
SLIRP-210ENST00000557431 FGL1Q08830 312 aa9.87□□□□□ -0.83
SLIRP-210ENST00000557431 C1orf194Q5T5A4 169 aa9.87□□□□□ -0.83
SLIRP-210ENST00000557431 TRGV9Q99603 122 aa9.87□□□□□ -0.83
SLIRP-210ENST00000557431 PFDN2Q9UHV9 154 aa9.87□□□□□ -0.83
SLIRP-210ENST00000557431 DNAH5Q8TE73 4624 aa9.87□□□□□ -0.83
SLIRP-210ENST00000557431 ZNF98A6NK75 572 aa9.86□□□□□ -0.83
SLIRP-210ENST00000557431 ORM2P19652 201 aa9.86□□□□□ -0.83
SLIRP-210ENST00000557431 GALR1P47211 349 aa9.86□□□□□ -0.83
SLIRP-210ENST00000557431 SPATA31B1PQ5VZV4 182 aa9.86□□□□□ -0.83
SLIRP-210ENST00000557431 THAP8Q8NA92 274 aa9.86□□□□□ -0.83
SLIRP-210ENST00000557431 LINC00588Q9Y4M8 146 aa9.86□□□□□ -0.83
SLIRP-210ENST00000557431 PIGBOS1A0A0B4J2F0 54 aa9.85□□□□□ -0.83
SLIRP-210ENST00000557431 LINC00854A0A1B0GVQ3 168 aa9.85□□□□□ -0.83
SLIRP-210ENST00000557431 CENPXA8MT69 81 aa9.85□□□□□ -0.83
SLIRP-210ENST00000557431 NDUFB6O95139 128 aa9.85□□□□□ -0.83
SLIRP-210ENST00000557431 INSP01308 110 aa9.85□□□□□ -0.83
SLIRP-210ENST00000557431 HTN1P15515 57 aa9.85□□□□□ -0.83
SLIRP-210ENST00000557431 VAMP1P23763 118 aa9.85□□□□□ -0.83
SLIRP-210ENST00000557431 LINC00299Q6ZSB3 139 aa9.85□□□□□ -0.83
SLIRP-210ENST00000557431 LRTM2Q8N967 370 aa9.85□□□□□ -0.83
SLIRP-210ENST00000557431 OR1B1Q8NGR6 318 aa9.85□□□□□ -0.83
SLIRP-210ENST00000557431 RNF141Q8WVD5 230 aa9.85□□□□□ -0.83
SLIRP-210ENST00000557431 CACFD1Q9UGQ2 172 aa9.85□□□□□ -0.83
SLIRP-210ENST00000557431 DUXBA0A1W2PPF3 345 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 LYRM9A8MSI8 78 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 H3BP45 60 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 WRBO00258 174 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 PITX3O75364 302 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 CDK2AP2O75956 126 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 SFT2D2O95562 160 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 BTCP35070 178 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 MEOX2P50222 304 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 UBE2MP61081 183 aaKnown RBP9.84□□□□□ -0.83
SLIRP-210ENST00000557431 RAB11AP62491 216 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 PPP1R1AQ13522 171 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 SPATA12Q7Z6I5 190 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 UHRF2Q96PU4 802 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 KRTAP1-5Q9BYS1 174 aa9.84□□□□□ -0.83
SLIRP-210ENST00000557431 PRSS46E5RG02 174 aa9.83□□□□□ -0.84
SLIRP-210ENST00000557431 PLA2G10O15496 165 aa9.83□□□□□ -0.84
SLIRP-210ENST00000557431 FABP1P07148 127 aa9.83□□□□□ -0.84
SLIRP-210ENST00000557431 HIST1H1AQ02539 215 aaPredicted RBP9.83□□□□□ -0.84
SLIRP-210ENST00000557431 CNPY1Q3B7I2 92 aa9.83□□□□□ -0.84
SLIRP-210ENST00000557431 ZNF738Q8NE65 137 aa9.83□□□□□ -0.84
SLIRP-210ENST00000557431 PARD6GQ9BYG4 376 aaPredicted RBP9.83□□□□□ -0.84
SLIRP-210ENST00000557431 FLVCR2Q9UPI3 526 aa9.83□□□□□ -0.84
SLIRP-210ENST00000557431 BOLA2-SMG1P6H3BVE0 249 aa9.82□□□□□ -0.84
SLIRP-210ENST00000557431 ATP5G1P05496 136 aa9.82□□□□□ -0.84
SLIRP-210ENST00000557431 SNRPCP09234 159 aaKnown RBP9.82□□□□□ -0.84
SLIRP-210ENST00000557431 ATP5G3P48201 142 aa9.82□□□□□ -0.84
SLIRP-210ENST00000557431 FAM3BP58499 235 aaPredicted RBP9.82□□□□□ -0.84
SLIRP-210ENST00000557431 RHOBP62745 196 aa9.82□□□□□ -0.84
SLIRP-210ENST00000557431 AKR1C1Q04828 323 aa9.82□□□□□ -0.84
SLIRP-210ENST00000557431 KIR3DS1Q14943 382 aa9.82□□□□□ -0.84
SLIRP-210ENST00000557431 SSX7Q7RTT5 188 aa9.82□□□□□ -0.84
SLIRP-210ENST00000557431 LINC01587Q99440 93 aa9.82□□□□□ -0.84
SLIRP-210ENST00000557431 TMEM147Q9BVK8 224 aa9.82□□□□□ -0.84
SLIRP-210ENST00000557431 C9orf170A2RU37 121 aa9.81□□□□□ -0.84
SLIRP-210ENST00000557431 H3BRN7 92 aa9.81□□□□□ -0.84
SLIRP-210ENST00000557431 CCNKO75909 580 aa9.81□□□□□ -0.84
SLIRP-210ENST00000557431 DUSP14O95147 198 aaKnown RBP9.81□□□□□ -0.84
SLIRP-210ENST00000557431 SLC25A6P12236 298 aa9.81□□□□□ -0.84
SLIRP-210ENST00000557431 FUSP35637 526 aaKnown RBP eCLIP9.81□□□□□ -0.84
SLIRP-210ENST00000557431 CCL18P55774 89 aa9.81□□□□□ -0.84
SLIRP-210ENST00000557431 KRTAP10-2P60368 255 aa9.81□□□□□ -0.84
SLIRP-210ENST00000557431 DLK1P80370 383 aa9.81□□□□□ -0.84
SLIRP-210ENST00000557431 SPANXN5Q5MJ07 72 aa9.81□□□□□ -0.84
SLIRP-210ENST00000557431 GGNBP1Q5YKI7 109 aa9.81□□□□□ -0.84
SLIRP-210ENST00000557431 ACOT7LQ6ZUV0 252 aa9.81□□□□□ -0.84
SLIRP-210ENST00000557431 BPIFCQ8NFQ6 507 aa9.81□□□□□ -0.84
SLIRP-210ENST00000557431 CCDC32Q9BV29 185 aa9.81□□□□□ -0.84
SLIRP-210ENST00000557431 SCRT2Q9NQ03 307 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms