RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 LGALS9BQ3B8N2 356 aa11.3□□□□□ -0.6
TUBB3-213ENST00000557262 AMTNQ6UX39 209 aa11.3□□□□□ -0.6
TUBB3-213ENST00000557262 IGF2BP2-AS1Q96M15 143 aa11.3□□□□□ -0.6
TUBB3-213ENST00000557262 PKHD1P08F94 4074 aa11.29□□□□□ -0.6
TUBB3-213ENST00000557262 PCLOQ9Y6V0 5065 aa11.29□□□□□ -0.6
TUBB3-213ENST00000557262 A0A1B0GVY2 172 aa11.29□□□□□ -0.6
TUBB3-213ENST00000557262 C9orf170A2RU37 121 aa11.29□□□□□ -0.6
TUBB3-213ENST00000557262 CCDC160A6NGH7 325 aa11.29□□□□□ -0.6
TUBB3-213ENST00000557262 H3BP45 60 aa11.29□□□□□ -0.6
TUBB3-213ENST00000557262 IL5P05113 134 aa11.29□□□□□ -0.6
TUBB3-213ENST00000557262 ACOT7LQ6ZUV0 252 aa11.29□□□□□ -0.6
TUBB3-213ENST00000557262 UBE2DNLQ8IWF7 75 aa11.29□□□□□ -0.6
TUBB3-213ENST00000557262 TMEM208Q9BTX3 173 aa11.29□□□□□ -0.6
TUBB3-213ENST00000557262 PSENENQ9NZ42 101 aa11.29□□□□□ -0.6
TUBB3-213ENST00000557262 DNAH17Q9UFH2 4485 aa11.28□□□□□ -0.6
TUBB3-213ENST00000557262 PRSS29PA6NIE9 313 aa11.28□□□□□ -0.6
TUBB3-213ENST00000557262 ADAP1O75689 374 aa11.28□□□□□ -0.6
TUBB3-213ENST00000557262 HTN3P15516 51 aa11.28□□□□□ -0.6
TUBB3-213ENST00000557262 CNN1P51911 297 aaKnown RBP11.28□□□□□ -0.6
TUBB3-213ENST00000557262 RAP2BP61225 183 aa11.28□□□□□ -0.6
TUBB3-213ENST00000557262 DAD1P61803 113 aa11.28□□□□□ -0.6
TUBB3-213ENST00000557262 POLR2GP62487 172 aaKnown RBP eCLIP11.28□□□□□ -0.6
TUBB3-213ENST00000557262 IGFL4Q6B9Z1 124 aa11.28□□□□□ -0.6
TUBB3-213ENST00000557262 CYP2G1PQ6ZSU1 146 aa11.28□□□□□ -0.6
TUBB3-213ENST00000557262 SLC25A39Q9BZJ4 359 aaPredicted RBP11.28□□□□□ -0.6
TUBB3-213ENST00000557262 TRAV8-2A0A0B4J237 113 aa11.27□□□□□ -0.61
TUBB3-213ENST00000557262 SMCO3A2RU48 225 aa11.27□□□□□ -0.61
TUBB3-213ENST00000557262 H3BRN7 92 aa11.27□□□□□ -0.61
TUBB3-213ENST00000557262 RTL8CO15255 209 aa11.27□□□□□ -0.61
TUBB3-213ENST00000557262 B2MP61769 119 aa11.27□□□□□ -0.61
TUBB3-213ENST00000557262 FGL1Q08830 312 aa11.27□□□□□ -0.61
TUBB3-213ENST00000557262 RNF212Q495C1 297 aa11.27□□□□□ -0.61
TUBB3-213ENST00000557262 OR11H7Q8NGC8 314 aa11.27□□□□□ -0.61
TUBB3-213ENST00000557262 SMIM8Q96KF7 97 aa11.27□□□□□ -0.61
TUBB3-213ENST00000557262 SHANK2-AS3Q9BTD1 123 aa11.27□□□□□ -0.61
TUBB3-213ENST00000557262 HIGD1AQ9Y241 93 aa11.27□□□□□ -0.61
TUBB3-213ENST00000557262 NAP1L6A6NFF2 107 aa11.26□□□□□ -0.61
TUBB3-213ENST00000557262 PMS2P5A8MQ11 134 aa11.26□□□□□ -0.61
TUBB3-213ENST00000557262 CRXO43186 299 aaPredicted RBP11.26□□□□□ -0.61
TUBB3-213ENST00000557262 HYPMO75409 117 aa11.26□□□□□ -0.61
TUBB3-213ENST00000557262 NDUFB6O95139 128 aa11.26□□□□□ -0.61
TUBB3-213ENST00000557262 RPL7P18124 248 aaKnown RBP11.26□□□□□ -0.61
TUBB3-213ENST00000557262 INPP1P49441 399 aa11.26□□□□□ -0.61
TUBB3-213ENST00000557262 PLP1P60201 277 aa11.26□□□□□ -0.61
TUBB3-213ENST00000557262 SELENOTP62341 195 aa11.26□□□□□ -0.61
TUBB3-213ENST00000557262 SPINK13Q1W4C9 94 aa11.26□□□□□ -0.61
TUBB3-213ENST00000557262 SPANXN2Q5MJ10 180 aa11.26□□□□□ -0.61
TUBB3-213ENST00000557262 RNF182Q8N6D2 247 aa11.26□□□□□ -0.61
TUBB3-213ENST00000557262 SRRQ9GZT4 340 aa11.26□□□□□ -0.61
TUBB3-213ENST00000557262 NPVFQ9HCQ7 196 aa11.26□□□□□ -0.61
TUBB3-213ENST00000557262 ZNF705GA8MUZ8 300 aaPredicted RBP11.25□□□□□ -0.61
TUBB3-213ENST00000557262 M0R2Z0 102 aa11.25□□□□□ -0.61
TUBB3-213ENST00000557262 INSP01308 110 aa11.25□□□□□ -0.61
TUBB3-213ENST00000557262 OR5G3P0C626 314 aa11.25□□□□□ -0.61
TUBB3-213ENST00000557262 Q6ZR54 194 aa11.25□□□□□ -0.61
TUBB3-213ENST00000557262 S100A7AQ86SG5 101 aa11.25□□□□□ -0.61
TUBB3-213ENST00000557262 FLVCR2Q9UPI3 526 aa11.25□□□□□ -0.61
TUBB3-213ENST00000557262 IGLV2-18A0A075B6J9 118 aa11.24□□□□□ -0.61
TUBB3-213ENST00000557262 SSSCA1O60232 199 aa11.24□□□□□ -0.61
TUBB3-213ENST00000557262 PRM2P04554 102 aa11.24□□□□□ -0.61
TUBB3-213ENST00000557262 OR4E1P0C645 316 aa11.24□□□□□ -0.61
TUBB3-213ENST00000557262 LINC00869P0C866 280 aa11.24□□□□□ -0.61
TUBB3-213ENST00000557262 DLK1P80370 383 aa11.24□□□□□ -0.61
TUBB3-213ENST00000557262 BAK1Q16611 211 aa11.24□□□□□ -0.61
TUBB3-213ENST00000557262 TMEM88Q6PEY1 159 aa11.24□□□□□ -0.61
TUBB3-213ENST00000557262 ZNF738Q8NE65 137 aa11.24□□□□□ -0.61
TUBB3-213ENST00000557262 LYRM9A8MSI8 78 aa11.23□□□□□ -0.61
TUBB3-213ENST00000557262 FNDC10F2Z333 226 aa11.23□□□□□ -0.61
TUBB3-213ENST00000557262 CCNKO75909 580 aa11.23□□□□□ -0.61
TUBB3-213ENST00000557262 TSPOP30536 169 aa11.23□□□□□ -0.61
TUBB3-213ENST00000557262 RRAS2P62070 204 aaPredicted RBP11.23□□□□□ -0.61
TUBB3-213ENST00000557262 TRIQKQ629K1 86 aa11.23□□□□□ -0.61
TUBB3-213ENST00000557262 TMEM14EPQ6UXP3 125 aa11.23□□□□□ -0.61
TUBB3-213ENST00000557262 OR10P1Q8NGE3 313 aa11.23□□□□□ -0.61
TUBB3-213ENST00000557262 LRRC20Q8TCA0 184 aa11.23□□□□□ -0.61
TUBB3-213ENST00000557262 UHRF2Q96PU4 802 aa11.23□□□□□ -0.61
TUBB3-213ENST00000557262 RNF24Q9Y225 148 aa11.23□□□□□ -0.61
TUBB3-213ENST00000557262 A0A087X0K7 114 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 K7EPK0 472 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 METTL15P1P0C7V9 234 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 CXCL3P19876 107 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 TAS2R30P59541 319 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 RHOBP62745 196 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 PSG3Q16557 428 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 C4orf46Q504U0 113 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 TEPPQ6URK8 271 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 PATE2Q6UY27 113 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 BAP18Q8IXM2 172 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 C15orf53Q8NAA6 179 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 OR8A1Q8NGG7 326 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 ARL6Q9H0F7 186 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 RBM38Q9H0Z9 239 aaKnown RBP11.22□□□□□ -0.61
TUBB3-213ENST00000557262 PPP1R14DQ9NXH3 145 aa11.22□□□□□ -0.61
TUBB3-213ENST00000557262 TRAV12-2A0A075B6T6 113 aa11.21□□□□□ -0.61
TUBB3-213ENST00000557262 LINC00854A0A1B0GVQ3 168 aa11.21□□□□□ -0.61
TUBB3-213ENST00000557262 CENPXA8MT69 81 aa11.21□□□□□ -0.61
TUBB3-213ENST00000557262 BOLA2-SMG1P6H3BVE0 249 aa11.21□□□□□ -0.61
TUBB3-213ENST00000557262 ZNF701M0R085 212 aaPredicted RBP11.21□□□□□ -0.61
TUBB3-213ENST00000557262 DEFB130BP0DP73 79 aa11.21□□□□□ -0.61
TUBB3-213ENST00000557262 DEFB130AP0DP74 79 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms