RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 FGL1Q08830 312 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 RAB31Q13636 194 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 TMEM182Q6ZP80 229 aaPredicted RBP8.71□□□□□ -1.02
SYNE2-226ENST00000557084 ZNF546Q86UE3 836 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 C11orf45Q8TAV5 145 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 ARL6Q9H0F7 186 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 SLC25A32Q9H2D1 315 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 C11orf68Q9H3H3 251 aaKnown RBP8.71□□□□□ -1.02
SYNE2-226ENST00000557084 RPRMQ9NS64 109 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 XCL2Q9UBD3 114 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 RNF24Q9Y225 148 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 HLA-DRB4X5D2U9 266 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 SACSQ9NZJ4 4579 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 PMS2P5A8MQ11 134 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 CST7O76096 145 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 C4BPBP20851 252 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 DEFA1P59665 94 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 DEFA3P59666 94 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 SLC38A11Q08AI6 406 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 PXDC1Q5TGL8 231 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 SPATA31B1PQ5VZV4 182 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 CEMP1Q6PRD7 247 aaPredicted RBP8.7□□□□□ -1.02
SYNE2-226ENST00000557084 FOXI2Q6ZQN5 318 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 STX12Q86Y82 276 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 OR4B1Q8NGF8 309 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 LRRC20Q8TCA0 184 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 SCRT1Q9BWW7 348 aa8.7□□□□□ -1.02
SYNE2-226ENST00000557084 SLC25A39Q9BZJ4 359 aaPredicted RBP8.7□□□□□ -1.02
SYNE2-226ENST00000557084 COX7A2P2O60397 106 aa8.69□□□□□ -1.02
SYNE2-226ENST00000557084 PRAF2O60831 178 aa8.69□□□□□ -1.02
SYNE2-226ENST00000557084 RLN2P04090 185 aa8.69□□□□□ -1.02
SYNE2-226ENST00000557084 GIG44P09565 113 aaPredicted RBP8.69□□□□□ -1.02
SYNE2-226ENST00000557084 MIFP14174 115 aa8.69□□□□□ -1.02
SYNE2-226ENST00000557084 RPL7P18124 248 aaKnown RBP8.69□□□□□ -1.02
SYNE2-226ENST00000557084 HBG1P69891 147 aa8.69□□□□□ -1.02
SYNE2-226ENST00000557084 HBG2P69892 147 aa8.69□□□□□ -1.02
SYNE2-226ENST00000557084 UHRF2Q96PU4 802 aa8.69□□□□□ -1.02
SYNE2-226ENST00000557084 LYSTQ99698 3801 aa8.69□□□□□ -1.02
SYNE2-226ENST00000557084 SHANK2-AS3Q9BTD1 123 aa8.69□□□□□ -1.02
SYNE2-226ENST00000557084 SAV1Q9H4B6 383 aaPredicted RBP8.69□□□□□ -1.02
SYNE2-226ENST00000557084 PLECQ15149 4684 aaKnown RBP8.69□□□□□ -1.02
SYNE2-226ENST00000557084 IGHV4-28A0A0C4DH34 117 aa8.68□□□□□ -1.02
SYNE2-226ENST00000557084 FAM24AA6NFZ4 105 aa8.68□□□□□ -1.02
SYNE2-226ENST00000557084 INMT-MINDY4F8WBC2 141 aa8.68□□□□□ -1.02
SYNE2-226ENST00000557084 H3BRN7 92 aa8.68□□□□□ -1.02
SYNE2-226ENST00000557084 SOCS3O14543 225 aa8.68□□□□□ -1.02
SYNE2-226ENST00000557084 AGPAT2O15120 278 aa8.68□□□□□ -1.02
SYNE2-226ENST00000557084 SULT1A1P50225 295 aa8.68□□□□□ -1.02
SYNE2-226ENST00000557084 DEFB1P60022 68 aa8.68□□□□□ -1.02
SYNE2-226ENST00000557084 NANOS2P60321 138 aaKnown RBP8.68□□□□□ -1.02
SYNE2-226ENST00000557084 IFITM3Q01628 133 aa8.68□□□□□ -1.02
SYNE2-226ENST00000557084 ARL16Q0P5N6 197 aa8.68□□□□□ -1.02
SYNE2-226ENST00000557084 RAB32Q13637 225 aa8.68□□□□□ -1.02
SYNE2-226ENST00000557084 NRARPQ7Z6K4 114 aa8.68□□□□□ -1.02
SYNE2-226ENST00000557084 PHLDA1Q8WV24 401 aaPredicted RBP8.68□□□□□ -1.02
SYNE2-226ENST00000557084 UQCC1Q9NVA1 299 aa8.68□□□□□ -1.02
SYNE2-226ENST00000557084 SSNA1O43805 119 aa8.67□□□□□ -1.02
SYNE2-226ENST00000557084 S100A11P31949 105 aa8.67□□□□□ -1.02
SYNE2-226ENST00000557084 CAMLGP49069 296 aa8.67□□□□□ -1.02
SYNE2-226ENST00000557084 FXYD7P58549 80 aa8.67□□□□□ -1.02
SYNE2-226ENST00000557084 PLP1P60201 277 aa8.67□□□□□ -1.02
SYNE2-226ENST00000557084 PSG9Q00887 426 aa8.67□□□□□ -1.02
SYNE2-226ENST00000557084 GDF5OSQ5U4N7 250 aa8.67□□□□□ -1.02
SYNE2-226ENST00000557084 FAM78BQ5VT40 261 aa8.67□□□□□ -1.02
SYNE2-226ENST00000557084 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.67□□□□□ -1.02
SYNE2-226ENST00000557084 Q6ZRG5 221 aa8.67□□□□□ -1.02
SYNE2-226ENST00000557084 Q8NAQ8 132 aa8.67□□□□□ -1.02
SYNE2-226ENST00000557084 ARV1Q9H2C2 271 aa8.67□□□□□ -1.02
SYNE2-226ENST00000557084 LYRM2Q9NU23 88 aaPredicted RBP8.67□□□□□ -1.02
SYNE2-226ENST00000557084 IGHV3OR16-12A0A075B7B8 117 aa8.66□□□□□ -1.02
SYNE2-226ENST00000557084 ELOA3CA0A087WX78 387 aaPredicted RBP8.66□□□□□ -1.02
SYNE2-226ENST00000557084 UBE2L5PA0A1B0GUS4 154 aa8.66□□□□□ -1.02
SYNE2-226ENST00000557084 ZNF705EA8MWA4 302 aaPredicted RBP8.66□□□□□ -1.02
SYNE2-226ENST00000557084 F6UB75 175 aa8.66□□□□□ -1.02
SYNE2-226ENST00000557084 SIX6O95475 246 aa8.66□□□□□ -1.02
SYNE2-226ENST00000557084 CYCSP99999 105 aaKnown RBP8.66□□□□□ -1.02
SYNE2-226ENST00000557084 TNP2Q05952 138 aa8.66□□□□□ -1.02
SYNE2-226ENST00000557084 BAXQ07812 192 aa8.66□□□□□ -1.02
SYNE2-226ENST00000557084 C10orf113Q5VZT2 155 aa8.66□□□□□ -1.02
SYNE2-226ENST00000557084 LINC00305Q7Z4B0 112 aa8.66□□□□□ -1.02
SYNE2-226ENST00000557084 CSNK1G2-AS1Q8NCQ2 148 aa8.66□□□□□ -1.02
SYNE2-226ENST00000557084 ZNF738Q8NE65 137 aa8.66□□□□□ -1.02
SYNE2-226ENST00000557084 MGST2Q99735 147 aa8.66□□□□□ -1.02
SYNE2-226ENST00000557084 A0A0J9YX75 114 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 DUSP14O95147 198 aaKnown RBP8.65□□□□□ -1.02
SYNE2-226ENST00000557084 LY6G6CO95867 125 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 ATP6V1FQ16864 119 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 LRRC37A5PQ49AS3 106 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 IGFL4Q6B9Z1 124 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 PATE2Q6UY27 113 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 RNF182Q8N6D2 247 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 TMEM252Q8N6L7 170 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 C20orf173Q96LM9 149 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 CLUHP3Q96NS8 147 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 SLC25A31Q9H0C2 315 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 PPP1R14DQ9NXH3 145 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 GOLT1BQ9Y3E0 138 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 X6R8D5 127 aa8.65□□□□□ -1.02
SYNE2-226ENST00000557084 IGSF23A1L1A6 192 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 E5RGE8 158 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 424 ms