RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 MC5RP33032 325 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 DLX6P56179 175 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 LINC00311Q8N616 119 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 SLC25A39Q9BZJ4 359 aaPredicted RBP9.06□□□□□ -0.96
SRP54-213ENST00000556994 GFRA4Q9GZZ7 299 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 SOX21Q9Y651 276 aaPredicted RBP9.06□□□□□ -0.96
SRP54-213ENST00000556994 LRBAP50851 2863 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 NPIPB6E9PJ23 425 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 LIPFP07098 398 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 LGALS7P47929 136 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 TEX45Q8NA69 505 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 ZC2HC1AQ96GY0 325 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 SCRT2Q9NQ03 307 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 K7EP13 123 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 OVOL3O00110 214 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 HAX1O00165 279 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 KLK10O43240 276 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 NEU4Q8WWR8 484 aaPredicted RBP9.05□□□□□ -0.96
SRP54-213ENST00000556994 FBXL15Q9H469 300 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 C1RLQ9NZP8 487 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 SIGLEC9Q9Y336 463 aa9.05□□□□□ -0.96
SRP54-213ENST00000556994 TNFRSF13BO14836 293 aaPredicted RBP9.04□□□□□ -0.96
SRP54-213ENST00000556994 CEACAM4O75871 244 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 NCR2O95944 276 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 OR5AL1P0C617 328 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 IGLC1P0CG04 106 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 FAM106CPP0CH98 169 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 TCTAP57738 103 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 FAM106AQ4KMX7 169 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 TMEM155Q4W5P6 130 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 AMMECR1LQ6DCA0 310 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 FAM71F2Q6NXP2 309 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 OTORQ9NRC9 128 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 ZNF318Q5VUA4 2279 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 CUL9Q8IWT3 2517 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 SVEP1Q4LDE5 3571 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 TRAV30A0A087WSZ9 112 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 A0A1B0GUT8 65 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 TEX22C9J3V5 150 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 THBDP07204 575 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 PVRIGQ6DKI7 326 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 PET117Q6UWS5 81 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 TMEM133Q9H2Q1 129 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 INSIG2Q9Y5U4 225 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 F11RQ9Y624 299 aaKnown RBP9.04□□□□□ -0.96
SRP54-213ENST00000556994 S4R3C0 116 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 OTOGLQ3ZCN5 2332 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 DCHS2Q6V1P9 2916 aa9.04□□□□□ -0.96
SRP54-213ENST00000556994 A0A0G2JNJ9 132 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 LOC389332A0A1B0GUA5 103 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 A0A1W2PRD5 423 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 A0A1W2PRF3 423 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 A0A1W2PRM7 423 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 C16orf97H3BN30 126 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 CRYGBP07316 175 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 FXYD7P58549 80 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 PIP4P1Q86T03 277 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 PPP1R27Q86WC6 154 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 IGFBPL1Q8WX77 278 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 RASL11BQ9BPW5 248 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 Q9UFV3 132 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 FAM231BA6NCW3 169 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 HLA-DRB1P01911 266 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 CRIP1P50238 77 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 PLP1P60201 277 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 Q6ZS92 163 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 DEFB125Q8N687 156 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 C8orf31Q8N9H6 132 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 HSPB8Q9UJY1 196 aa9.03□□□□□ -0.96
SRP54-213ENST00000556994 TMSB15BA0A087X1C1 80 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 IGHV1-3A0A0C4DH29 117 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 LYNX1G3V0Z9 82 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 M0R3E3 92 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 LYNX1P0DP58 116 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 COX7A1P24310 79 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 ARF6P62330 175 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 LOXL1Q08397 574 aaPredicted RBP9.02□□□□□ -0.97
SRP54-213ENST00000556994 PRSS3P2Q8NHM4 247 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 AP5S1Q9NUS5 200 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 SELENOKQ9Y6D0 94 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 RELNP78509 3460 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 ANKRD11Q6UB99 2663 aaPredicted RBP9.02□□□□□ -0.97
SRP54-213ENST00000556994 SERTM2A0A1B0GWG4 89 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 IGKV1-17P01599 117 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 IFI27P40305 119 aaPredicted RBP9.02□□□□□ -0.97
SRP54-213ENST00000556994 CDKN1BP46527 198 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 PLGLAQ15195 96 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 LDLRAD2Q5SZI1 272 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 LINC01545Q5VT33 79 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 C12orf54Q6X4T0 127 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 BCL6BQ8N143 479 aaPredicted RBP9.02□□□□□ -0.97
SRP54-213ENST00000556994 FAM57AQ8TBR7 257 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 C8orf49Q96NF6 230 aa9.02□□□□□ -0.97
SRP54-213ENST00000556994 APC2O95996 2303 aa9.01□□□□□ -0.97
SRP54-213ENST00000556994 I3L2K1 104 aa9.01□□□□□ -0.97
SRP54-213ENST00000556994 RHOGP84095 191 aa9.01□□□□□ -0.97
SRP54-213ENST00000556994 C16orf54Q6UWD8 224 aa9.01□□□□□ -0.97
SRP54-213ENST00000556994 OR8A1Q8NGG7 326 aa9.01□□□□□ -0.97
SRP54-213ENST00000556994 RNASE6Q93091 150 aaKnown RBP9.01□□□□□ -0.97
SRP54-213ENST00000556994 ZNF747Q9BV97 191 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 289.1 ms