RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 MIC13Q5XKP0 118 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 IGFL4Q6B9Z1 124 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 PATE2Q6UY27 113 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 ZNF546Q86UE3 836 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 TMEM252Q8N6L7 170 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 GATAD1Q8WUU5 269 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 C16orf92Q96LL3 132 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 RSG1Q9BU20 258 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 GGACTQ9BVM4 153 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 ARV1Q9H2C2 271 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 SEPSECSQ9HD40 501 aaKnown RBP7.56□□□□□ -1.2
SNX6-208ENST00000556712 HLA-DRB4X5D2U9 266 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 RYR3Q15413 4870 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 ALMS1Q8TCU4 4167 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 CXorf65A6NEN9 183 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 H0YIZ8 118 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 H3BMM0 161 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 ISLRO14498 428 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 SSNA1O43805 119 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 SNRPCP09234 159 aaKnown RBP7.55□□□□□ -1.2
SNX6-208ENST00000556712 ID1P41134 155 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 CAMLGP49069 296 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 H2BFSP57053 126 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 FXYD7P58549 80 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 BAXQ07812 192 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 FGL1Q08830 312 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 MORN5Q5VZ52 161 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 MORN3Q6PF18 240 aaPredicted RBP7.55□□□□□ -1.2
SNX6-208ENST00000556712 STX12Q86Y82 276 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 RNF182Q8N6D2 247 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 NMES1Q9C002 83 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 SAV1Q9H4B6 383 aaPredicted RBP7.55□□□□□ -1.2
SNX6-208ENST00000556712 UQCC1Q9NVA1 299 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 WDR83OSQ9Y284 106 aa7.55□□□□□ -1.2
SNX6-208ENST00000556712 TRAV8-2A0A0B4J237 113 aa7.54□□□□□ -1.2
SNX6-208ENST00000556712 ATF4P18848 351 aaPredicted RBP7.54□□□□□ -1.2
SNX6-208ENST00000556712 FGF7P21781 194 aa7.54□□□□□ -1.2
SNX6-208ENST00000556712 HLA-DMBP28068 263 aa7.54□□□□□ -1.2
SNX6-208ENST00000556712 MEOX2P50222 304 aa7.54□□□□□ -1.2
SNX6-208ENST00000556712 NHLH2Q02577 135 aa7.54□□□□□ -1.2
SNX6-208ENST00000556712 VWC2Q2TAL6 325 aa7.54□□□□□ -1.2
SNX6-208ENST00000556712 FOXI2Q6ZQN5 318 aa7.54□□□□□ -1.2
SNX6-208ENST00000556712 LINC00305Q7Z4B0 112 aa7.54□□□□□ -1.2
SNX6-208ENST00000556712 Q8NAQ8 132 aa7.54□□□□□ -1.2
SNX6-208ENST00000556712 OR4B1Q8NGF8 309 aa7.54□□□□□ -1.2
SNX6-208ENST00000556712 GPR82Q96P67 336 aa7.54□□□□□ -1.2
SNX6-208ENST00000556712 XCL2Q9UBD3 114 aa7.54□□□□□ -1.2
SNX6-208ENST00000556712 SACSQ9NZJ4 4579 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 IGHV4-28A0A0C4DH34 117 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 A0A0J9YX75 114 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 H3BTX0 84 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 MRPS12O15235 138 aaKnown RBP7.53□□□□□ -1.2
SNX6-208ENST00000556712 COX7A2P2O60397 106 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 RPL7P18124 248 aaKnown RBP7.53□□□□□ -1.2
SNX6-208ENST00000556712 HBG1P69891 147 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 HBG2P69892 147 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 C10orf113Q5VZT2 155 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 CSNK1G2-AS1Q8NCQ2 148 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 PPP1R1CQ8WVI7 109 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 TMEM37Q8WXS4 190 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 SLC35B3Q9H1N7 401 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 C11orf68Q9H3H3 251 aaKnown RBP7.53□□□□□ -1.2
SNX6-208ENST00000556712 ALG5Q9Y673 324 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 X6R8D5 127 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 TENM2Q9NT68 2774 aa7.53□□□□□ -1.2
SNX6-208ENST00000556712 LCE6AA0A183 80 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 ZNF705EA8MWA4 302 aaPredicted RBP7.52□□□□□ -1.21
SNX6-208ENST00000556712 E5RGE8 158 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 ZNF705DP0CH99 300 aaPredicted RBP7.52□□□□□ -1.21
SNX6-208ENST00000556712 ZNF705BP0CI00 300 aaPredicted RBP7.52□□□□□ -1.21
SNX6-208ENST00000556712 RBMY1A1P0DJD3 496 aaKnown RBP7.52□□□□□ -1.21
SNX6-208ENST00000556712 RBMY1CP0DJD4 496 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 S100A7P31151 101 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 S100A11P31949 105 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 NANOS2P60321 138 aaKnown RBP7.52□□□□□ -1.21
SNX6-208ENST00000556712 B2MP61769 119 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 PRR20EP86478 221 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 PRR20CP86479 221 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 PRR20DP86480 221 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 PRR20BP86481 221 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 PRR20AP86496 221 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 CLINT1Q14677 625 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 OPCMLQ14982 345 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 RBMY1FQ15415 496 aaKnown RBP7.52□□□□□ -1.21
SNX6-208ENST00000556712 TMEM41BQ5BJD5 291 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 PXDC1Q5TGL8 231 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 FAM78BQ5VT40 261 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 SAMD13Q5VXD3 122 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 ZNF709Q8N972 641 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 OR5C1Q8NGR4 320 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 THAP6Q8TBB0 222 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 RPRMQ9NS64 109 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 RYR2Q92736 4967 aa7.52□□□□□ -1.21
SNX6-208ENST00000556712 A0A087X0K7 114 aa7.51□□□□□ -1.21
SNX6-208ENST00000556712 TRAV5A0A0B4J249 113 aa7.51□□□□□ -1.21
SNX6-208ENST00000556712 SLC17A3O00476 420 aa7.51□□□□□ -1.21
SNX6-208ENST00000556712 PTTG1O95997 202 aa7.51□□□□□ -1.21
SNX6-208ENST00000556712 RLN2P04090 185 aa7.51□□□□□ -1.21
SNX6-208ENST00000556712 NUTF2P61970 127 aaKnown RBP7.51□□□□□ -1.21
SNX6-208ENST00000556712 CYCSP99999 105 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms