RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 LINC01006Q8NI28 216 aa8.32□□□□□ -1.08
LINC01550-206ENST00000556462 OR4F4Q96R69 305 aa8.32□□□□□ -1.08
LINC01550-206ENST00000556462 JMJD8Q96S16 334 aa8.32□□□□□ -1.08
LINC01550-206ENST00000556462 TXNDC17Q9BRA2 123 aa8.32□□□□□ -1.08
LINC01550-206ENST00000556462 A0A1W2PRE2 83 aa8.31□□□□□ -1.08
LINC01550-206ENST00000556462 TMEM250H0YL14 139 aa8.31□□□□□ -1.08
LINC01550-206ENST00000556462 H3BQ15 152 aa8.31□□□□□ -1.08
LINC01550-206ENST00000556462 NDUFA4O00483 81 aa8.31□□□□□ -1.08
LINC01550-206ENST00000556462 GGCTO75223 188 aaKnown RBP8.31□□□□□ -1.08
LINC01550-206ENST00000556462 CEBPGP53567 150 aa8.31□□□□□ -1.08
LINC01550-206ENST00000556462 GUCA2BQ16661 112 aa8.31□□□□□ -1.08
LINC01550-206ENST00000556462 S100A7AQ86SG5 101 aa8.31□□□□□ -1.08
LINC01550-206ENST00000556462 BPIFA4PQ86YQ2 179 aa8.31□□□□□ -1.08
LINC01550-206ENST00000556462 GGTLC3B5MD39 225 aa8.31□□□□□ -1.08
LINC01550-206ENST00000556462 BUB3O43684 328 aa8.31□□□□□ -1.08
LINC01550-206ENST00000556462 HIST1H1EP10412 219 aaKnown RBP8.31□□□□□ -1.08
LINC01550-206ENST00000556462 CRYBB3P26998 211 aa8.31□□□□□ -1.08
LINC01550-206ENST00000556462 ZNF586Q9NXT0 402 aa8.31□□□□□ -1.08
LINC01550-206ENST00000556462 U3KQE9 123 aa8.31□□□□□ -1.08
LINC01550-206ENST00000556462 SETD2Q9BYW2 2564 aaPredicted RBP8.31□□□□□ -1.08
LINC01550-206ENST00000556462 PDE6DO43924 150 aa8.3□□□□□ -1.08
LINC01550-206ENST00000556462 SCO1O75880 301 aa8.3□□□□□ -1.08
LINC01550-206ENST00000556462 APOHP02749 345 aaPredicted RBP8.3□□□□□ -1.08
LINC01550-206ENST00000556462 LGALS1P09382 135 aaKnown RBP8.3□□□□□ -1.08
LINC01550-206ENST00000556462 IGLC2P0DOY2 106 aa8.3□□□□□ -1.08
LINC01550-206ENST00000556462 SUMO1P63165 101 aaKnown RBP8.3□□□□□ -1.08
LINC01550-206ENST00000556462 BLNKQ8WV28 456 aa8.3□□□□□ -1.08
LINC01550-206ENST00000556462 C20orf24Q9BUV8 137 aa8.3□□□□□ -1.08
LINC01550-206ENST00000556462 H3BTX0 84 aa8.3□□□□□ -1.08
LINC01550-206ENST00000556462 ZNF207O43670 478 aaKnown RBP8.3□□□□□ -1.08
LINC01550-206ENST00000556462 MYCNOSP40205 109 aa8.3□□□□□ -1.08
LINC01550-206ENST00000556462 CDX1P47902 265 aaPredicted RBP8.3□□□□□ -1.08
LINC01550-206ENST00000556462 RANP62826 216 aaKnown RBP8.3□□□□□ -1.08
LINC01550-206ENST00000556462 ATRAIDQ6UW56 229 aa8.3□□□□□ -1.08
LINC01550-206ENST00000556462 C18orf65Q6ZTR6 163 aa8.3□□□□□ -1.08
LINC01550-206ENST00000556462 C17orf77Q96MU5 243 aa8.3□□□□□ -1.08
LINC01550-206ENST00000556462 SMAD5-AS1Q9Y6J3 95 aa8.3□□□□□ -1.08
LINC01550-206ENST00000556462 TCF21O43680 179 aa8.29□□□□□ -1.08
LINC01550-206ENST00000556462 NDUFB4O95168 129 aa8.29□□□□□ -1.08
LINC01550-206ENST00000556462 NDUFA7O95182 113 aa8.29□□□□□ -1.08
LINC01550-206ENST00000556462 GPHB5Q86YW7 130 aa8.29□□□□□ -1.08
LINC01550-206ENST00000556462 OR8I2Q8N0Y5 310 aa8.29□□□□□ -1.08
LINC01550-206ENST00000556462 SVBPQ8N300 66 aa8.29□□□□□ -1.08
LINC01550-206ENST00000556462 TMEM190Q8WZ59 177 aa8.29□□□□□ -1.08
LINC01550-206ENST00000556462 METTL26Q96S19 204 aa8.29□□□□□ -1.08
LINC01550-206ENST00000556462 ELOVL1Q9BW60 279 aa8.29□□□□□ -1.08
LINC01550-206ENST00000556462 NKX6-2Q9C056 277 aaPredicted RBP8.29□□□□□ -1.08
LINC01550-206ENST00000556462 PARLQ9H300 379 aa8.29□□□□□ -1.08
LINC01550-206ENST00000556462 TRBV19A0A075B6N1 114 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 IGHV3OR16-13A0A075B7E8 117 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 IGHV3-74A0A0B4J1X5 117 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 SCO2A0A1W2PP80 73 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 F6UZH7 168 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 ATF4P18848 351 aaPredicted RBP8.28□□□□□ -1.08
LINC01550-206ENST00000556462 S100A7P31151 101 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 SRSF2Q01130 221 aaKnown RBP8.28□□□□□ -1.08
LINC01550-206ENST00000556462 HIST2H2BDQ6DRA6 164 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 OR4F17Q8NGA8 305 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 RPUSD4Q96CM3 377 aaKnown RBP8.28□□□□□ -1.08
LINC01550-206ENST00000556462 RNF24Q9Y225 148 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 IGHV4OR15-8A0A075B7B6 117 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 A0A087WW49 117 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 IGHV3-49A0A0A0MS15 119 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 IGHV3-66A0A0C4DH42 116 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 ZNF320A2RRD8 509 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 RPL7P18124 248 aaKnown RBP8.28□□□□□ -1.08
LINC01550-206ENST00000556462 C1orf194Q5T5A4 169 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 C11orf52Q96A22 123 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 DERL1Q9BUN8 251 aa8.28□□□□□ -1.08
LINC01550-206ENST00000556462 NIPBLQ6KC79 2804 aaeCLIP8.27□□□□□ -1.09
LINC01550-206ENST00000556462 PGPA6NDG6 321 aa8.27□□□□□ -1.09
LINC01550-206ENST00000556462 FAM106AQ4KMX7 169 aa8.27□□□□□ -1.09
LINC01550-206ENST00000556462 TM4SF20Q53R12 229 aa8.27□□□□□ -1.09
LINC01550-206ENST00000556462 C2CD3Q4AC94 2353 aa8.27□□□□□ -1.09
LINC01550-206ENST00000556462 ZNF727A8MUV8 499 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 K7EMT4 169 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 SLC17A3O00476 420 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 ZNF674Q2M3X9 581 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 RPEL1Q2QD12 228 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 SIGLEC15Q6ZMC9 328 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 CLRN3Q8NCR9 226 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 C4orf3Q8WVX3 66 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 WFDC12Q8WWY7 111 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 SMIM7Q9BQ49 75 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 NIPSNAP3BQ9BS92 247 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 Q9H3A6 140 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 SNAPINO95295 136 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 CD28P10747 220 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 PROK1P58294 105 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 PDE6HQ13956 83 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 DEFB136Q30KP8 78 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 FAM74A3Q4VXF1 159 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 C16orf54Q6UWD8 224 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 EXOC3-AS1Q8N2X6 119 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 C11orf44Q8N8P7 122 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 C2CD4CQ8TF44 421 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 GPR82Q96P67 336 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 SDF2L1Q9HCN8 221 aa8.26□□□□□ -1.09
LINC01550-206ENST00000556462 DAZ1Q9NQZ3 744 aaKnown RBP8.26□□□□□ -1.09
LINC01550-206ENST00000556462 RNF114Q9Y508 228 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms