RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 CD5P06127 495 aa10.56□□□□□ -0.72
VIPAS39-208ENST00000556412 PAFAH1B2P68402 229 aa10.56□□□□□ -0.72
VIPAS39-208ENST00000556412 EGFEM1PQ0D2K5 195 aa10.56□□□□□ -0.72
VIPAS39-208ENST00000556412 ACOT6Q3I5F7 207 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-208ENST00000556412 FAM90A2PQ658T7 463 aa10.56□□□□□ -0.72
VIPAS39-208ENST00000556412 PSMG3Q9BT73 122 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-208ENST00000556412 SEPSECSQ9HD40 501 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-208ENST00000556412 ZNF785A8K8V0 405 aa10.55□□□□□ -0.72
VIPAS39-208ENST00000556412 GALR1P47211 349 aa10.55□□□□□ -0.72
VIPAS39-208ENST00000556412 RAB2AP61019 212 aa10.55□□□□□ -0.72
VIPAS39-208ENST00000556412 SPATA31B1PQ5VZV4 182 aa10.55□□□□□ -0.72
VIPAS39-208ENST00000556412 SPAG8Q99932 426 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-208ENST00000556412 MS4A6AQ9H2W1 248 aa10.55□□□□□ -0.72
VIPAS39-208ENST00000556412 OR4C46A6NHA9 309 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 EIF3GO75821 320 aaKnown RBP eCLIP10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 SNRPCP09234 159 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 RPL7P18124 248 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 M6PRP20645 277 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 C4BPBP20851 252 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 EIF5AP63241 154 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 FAM122CQ6P4D5 195 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 MIR17HGQ75NE6 70 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 GTSCR1Q86UQ5 136 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 OR10G4Q8NGN3 311 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 OR10G9Q8NGN4 311 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 OR10G7Q8NGN6 311 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 RNF24Q9Y225 148 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 MGAM2Q2M2H8 2515 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 A0A1W2PPV4 95 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 BOLA2-SMG1P6H3BVE0 249 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 TPT1P13693 172 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 ATF4P18848 351 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 SERF2P84101 59 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 KPRPQ5T749 579 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 GPR82Q96P67 336 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 FUT9Q9Y231 359 aa10.54□□□□□ -0.72
VIPAS39-208ENST00000556412 CD81P60033 236 aa10.53□□□□□ -0.72
VIPAS39-208ENST00000556412 RHOBP62745 196 aa10.53□□□□□ -0.72
VIPAS39-208ENST00000556412 AKR1C8PQ5T2L2 129 aa10.53□□□□□ -0.72
VIPAS39-208ENST00000556412 BPIFA4PQ86YQ2 179 aa10.53□□□□□ -0.72
VIPAS39-208ENST00000556412 BAP18Q8IXM2 172 aa10.53□□□□□ -0.72
VIPAS39-208ENST00000556412 MRPL32Q9BYC8 188 aaKnown RBP10.53□□□□□ -0.72
VIPAS39-208ENST00000556412 NRN1Q9NPD7 142 aa10.53□□□□□ -0.72
VIPAS39-208ENST00000556412 MBP02144 154 aa10.52□□□□□ -0.73
VIPAS39-208ENST00000556412 CD7P09564 240 aa10.52□□□□□ -0.73
VIPAS39-208ENST00000556412 SPP1P10451 314 aa10.52□□□□□ -0.73
VIPAS39-208ENST00000556412 UBQLN2Q9UHD9 624 aa10.52□□□□□ -0.73
VIPAS39-208ENST00000556412 BOLA1Q9Y3E2 137 aa10.52□□□□□ -0.73
VIPAS39-208ENST00000556412 SMAD5-AS1Q9Y6J3 95 aa10.52□□□□□ -0.73
VIPAS39-208ENST00000556412 H3BTX0 84 aa10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 HMGB3O15347 200 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 TMEM41BQ5BJD5 291 aa10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 SLC51BQ86UW2 128 aa10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 TMED6Q8WW62 240 aa10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 SLC25A2Q9BXI2 301 aa10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 AURKAIP1Q9NWT8 199 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 OR7C2O60412 319 aa10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 PYYP10082 97 aa10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 CDC34P49427 236 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 FAM24BQ8N5W8 94 aa10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 STOML3Q8TAV4 291 aa10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 LRRC20Q8TCA0 184 aa10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 RPRMQ9NS64 109 aa10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 NOTCH3Q9UM47 2321 aa10.51□□□□□ -0.73
VIPAS39-208ENST00000556412 SEC11BP0C7V7 166 aa10.5□□□□□ -0.73
VIPAS39-208ENST00000556412 ZNF688P0C7X2 276 aa10.5□□□□□ -0.73
VIPAS39-208ENST00000556412 TAS2R45P59539 299 aa10.5□□□□□ -0.73
VIPAS39-208ENST00000556412 RPP25LQ8N5L8 163 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-208ENST00000556412 DCANP1Q8TF63 244 aa10.5□□□□□ -0.73
VIPAS39-208ENST00000556412 K7EQG2 157 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 OR10J4P0C629 311 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 KHDC3LQ587J8 217 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 C16orf92Q96LL3 132 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 ACTR3CQ9C0K3 210 aaPredicted RBP10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 WFDC10AQ9H1F0 79 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 MRPS12O15235 138 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 MEOX2P50222 304 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 DEFA6Q01524 100 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 PSMG4Q5JS54 123 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 EIF5AL1Q6IS14 154 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 BLNKQ8WV28 456 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 RAB24Q969Q5 203 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 FAM167A-AS1Q96KT0 104 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 C17orf77Q96MU5 243 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 LINC00052Q96N35 136 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 PAXXQ9BUH6 204 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 OR51M1Q9H341 326 aa10.49□□□□□ -0.73
VIPAS39-208ENST00000556412 TRAV2A0A0B4J234 112 aa10.48□□□□□ -0.73
VIPAS39-208ENST00000556412 OR11H12B2RN74 326 aa10.48□□□□□ -0.73
VIPAS39-208ENST00000556412 H3BQ15 152 aa10.48□□□□□ -0.73
VIPAS39-208ENST00000556412 SNRPD3P62318 126 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-208ENST00000556412 UBE2L3P68036 154 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-208ENST00000556412 ODF3L2Q3SX64 289 aa10.48□□□□□ -0.73
VIPAS39-208ENST00000556412 IGFL4Q6B9Z1 124 aa10.48□□□□□ -0.73
VIPAS39-208ENST00000556412 IQCF2Q8IXL9 164 aa10.48□□□□□ -0.73
VIPAS39-208ENST00000556412 TMEM14CQ9P0S9 112 aa10.48□□□□□ -0.73
VIPAS39-208ENST00000556412 IGLC2P0DOY2 106 aa10.47□□□□□ -0.73
VIPAS39-208ENST00000556412 ID1P41134 155 aa10.47□□□□□ -0.73
VIPAS39-208ENST00000556412 DEFB131AP59861 70 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms