RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SFT2D2O95562 160 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 TMEM50AO95807 157 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 HPRT1P00492 218 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 IGKV1-5P01602 117 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 CTXN2P0C2S0 81 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 OR5AC1P0C628 307 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 NQO2P16083 231 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 CXCL2P19875 107 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 TBPP20226 339 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 FUSP35637 526 aaKnown RBP eCLIP4.75□□□□□ -1.65
ATXN3-236ENST00000556220 CBX5P45973 191 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 UCP3P55916 312 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 FXYD4P59646 89 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 KRTAP10-1P60331 282 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 DAD1P61803 113 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 MEF2DQ14814 521 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 USF2Q15853 346 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-236ENST00000556220 TTC32Q5I0X7 151 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 PSMG4Q5JS54 123 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 MZT2BQ6NZ67 158 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 TMED4Q7Z7H5 227 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 TMEM17Q86X19 198 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 SPAG16Q8N0X2 631 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 C9orf62Q8N4C0 152 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 ARRDC1Q8N5I2 433 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 OR1P1Q8NH06 330 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 MITD1Q8WV92 249 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 LSM10Q969L4 123 aaKnown RBP4.75□□□□□ -1.65
ATXN3-236ENST00000556220 PKHD1L1Q86WI1 4243 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 IGHV3OR16-12A0A075B7B8 117 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 A0A1W2PPQ1 181 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 SNRPGP15A8MWD9 76 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 TNFSF12O43508 249 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 GNG7O60262 68 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 PGLYRP1O75594 196 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-236ENST00000556220 MPC2O95563 127 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 IFNA5P01569 189 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 RLN1P04808 185 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 IGKV2-30P06310 120 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 NPPCP23582 126 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 LGALSLQ3ZCW2 172 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-236ENST00000556220 ZNF600Q6ZNG1 722 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 SSX7Q7RTT5 188 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 LYZL2Q7Z4W2 148 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 TCTE3Q8IZS6 198 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 C15orf40Q8WUR7 153 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 DEDD2Q8WXF8 326 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 ZNF486Q96H40 463 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-236ENST00000556220 HINT2Q9BX68 163 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 Q9H3A6 140 aa4.74□□□□□ -1.65
ATXN3-236ENST00000556220 YTHDF2Q9Y5A9 579 aaKnown RBP4.74□□□□□ -1.65
ATXN3-236ENST00000556220 LOC102723971A0A1B0GUV8 181 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 RNF222A6NCQ9 220 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 HELTA6NFD8 242 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 DISC1C4P0D8 188 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 TNFRSF6BO95407 300 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 MT-CO2P00403 227 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 CFDP00746 253 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-236ENST00000556220 IGHV3-48P01763 117 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 AKR1C4P17516 323 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 CRYBB3P26998 211 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 P2RY1P47900 373 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 NPBWR1P48145 328 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 HOXA1P49639 335 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-236ENST00000556220 PIGPP57054 158 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 TAS2R46P59540 309 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 AP3S2P59780 193 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 RND3P61587 244 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 CLINT1Q14677 625 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 MSMO1Q15800 293 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 NMSQ5H8A3 153 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 TBC1D26Q86UD7 250 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 SELENOHQ8IZQ5 122 aaKnown RBP4.73□□□□□ -1.65
ATXN3-236ENST00000556220 DMBX1Q8NFW5 382 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 SECTM1Q8WVN6 248 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 METTL26Q96S19 204 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 PRRT1Q99946 306 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 SLC25A21Q9BQT8 299 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-236ENST00000556220 NAA60Q9H7X0 242 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 PLEKHA2Q9HB19 425 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 OR5AC2Q9NZP5 309 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 OR51B2Q9Y5P1 312 aa4.73□□□□□ -1.65
ATXN3-236ENST00000556220 A0A087WWL8 130 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 A0A1B0GU03 582 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 F5H768 121 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 GOSR2O14653 212 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 PITX3O75364 302 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 CCNKO75909 580 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 HBE1P02100 147 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 HLA-DRB4P13762 266 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 UCP1P25874 307 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 RANBP1P43487 201 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 PAX9P55771 341 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 SNRPD3P62318 126 aaKnown RBP4.72□□□□□ -1.65
ATXN3-236ENST00000556220 SURF2Q15527 256 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-236ENST00000556220 GGNBP1Q5YKI7 109 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 Q6ZRN7 208 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-236ENST00000556220 AKAP14Q86UN6 197 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 C12orf45Q8N5I9 185 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-236ENST00000556220 LRTM2Q8N967 370 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms