RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 ZNF705AQ6ZN79 300 aaPredicted RBP6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 ZNF767PQ75MW2 155 aa6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 SLC25A32Q9H2D1 315 aa6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 SAV1Q9H4B6 383 aaPredicted RBP6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 GPN1Q9HCN4 374 aaPredicted RBP6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 XCL2Q9UBD3 114 aa6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 ALG5Q9Y673 324 aa6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 LINC00854A0A1B0GVQ3 168 aa6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 ZNF705FA8MVS1 300 aaPredicted RBP6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 SNRPGP15A8MWD9 76 aa6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 H2AFB2P0C5Z0 115 aa6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 ZNF705DP0CH99 300 aaPredicted RBP6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 ZNF705BP0CI00 300 aaPredicted RBP6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 ANXA7P20073 488 aaKnown RBP6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 NUP62P37198 522 aaPredicted RBP6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 PSMB3P49720 205 aa6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 PAX9P55771 341 aa6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 FXYD7P58549 80 aa6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 RAB11AP62491 216 aa6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 ID3Q02535 119 aa6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 SPANXN5Q5MJ07 72 aa6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 C1orf194Q5T5A4 169 aa6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 FOXI2Q6ZQN5 318 aa6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 C2CD4CQ8TF44 421 aa6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 CIB3Q96Q77 187 aaPredicted RBP6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 RCL1Q9Y2P8 373 aaKnown RBP6.68□□□□□ -1.34
VIPAS39-207ENST00000555854 TRAV8-2A0A0B4J237 113 aa6.67□□□□□ -1.34
VIPAS39-207ENST00000555854 PIGBOS1A0A0B4J2F0 54 aa6.67□□□□□ -1.34
VIPAS39-207ENST00000555854 A8MTW9 85 aa6.67□□□□□ -1.34
VIPAS39-207ENST00000555854 H3BRN7 92 aa6.67□□□□□ -1.34
VIPAS39-207ENST00000555854 SSSCA1O60232 199 aa6.67□□□□□ -1.34
VIPAS39-207ENST00000555854 MED6O75586 246 aa6.67□□□□□ -1.34
VIPAS39-207ENST00000555854 IGKV3-20P01619 116 aa6.67□□□□□ -1.34
VIPAS39-207ENST00000555854 OR4E1P0C645 316 aa6.67□□□□□ -1.34
VIPAS39-207ENST00000555854 CD300CQ08708 224 aa6.67□□□□□ -1.34
VIPAS39-207ENST00000555854 C12orf74Q32Q52 190 aa6.67□□□□□ -1.34
VIPAS39-207ENST00000555854 TMEM14EPQ6UXP3 125 aa6.67□□□□□ -1.34
VIPAS39-207ENST00000555854 LINC00052Q96N35 136 aa6.67□□□□□ -1.34
VIPAS39-207ENST00000555854 SLC35B3Q9H1N7 401 aa6.67□□□□□ -1.34
VIPAS39-207ENST00000555854 IGHV4-4A0A075B6R2 117 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 A0A0J9YX75 114 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 ZNF98A6NK75 572 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 IGLL5B9A064 214 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 C11orf94C9JXX5 98 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 ISLRO14498 428 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 AKR1C1Q04828 323 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 ARL16Q0P5N6 197 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 AMTNQ6UX39 209 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 TMEM144Q7Z5S9 345 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 C1orf158Q8N1D5 194 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 CLUHP3Q96NS8 147 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 SLC45A2Q9UMX9 530 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 STRAPQ9Y3F4 350 aaKnown RBP6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 HSPG2P98160 4391 aa6.66□□□□□ -1.34
VIPAS39-207ENST00000555854 TRAV10A0A0B4J240 114 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 AMBPP02760 352 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 FABP1P07148 127 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 IFITM2Q01629 132 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 FAM78BQ5VT40 261 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 IGFL4Q6B9Z1 124 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 CYP2G1PQ6ZSU1 146 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 OR8I2Q8N0Y5 310 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 COQ8AQ8NI60 647 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 MITD1Q8WV92 249 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 NEU1Q99519 415 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 C1QTNF4Q9BXJ3 329 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 C20orf85Q9H1P6 137 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 SLC25A22Q9H936 323 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 NUDT15Q9NV35 164 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 PSENENQ9NZ42 101 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 DOK5Q9P104 306 aa6.65□□□□□ -1.34
VIPAS39-207ENST00000555854 APOBP04114 4563 aaKnown RBP6.65□□□□□ -1.35
VIPAS39-207ENST00000555854 CCSO14618 274 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 MRPS12O15235 138 aaKnown RBP6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 CFDP00746 253 aaPredicted RBP6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 METTL15P1P0C7V9 234 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 LINC00869P0C866 280 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 PRB4P10163 310 aaPredicted RBP6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 ORM2P19652 201 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 TCTAP57738 103 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 PLP1P60201 277 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 RAP2BP61225 183 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 NUTF2P61970 127 aaKnown RBP6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 RPP30P78346 268 aaKnown RBP6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 DLK1P80370 383 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 SLC38A11Q08AI6 406 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 IAH1Q2TAA2 248 aaPredicted RBP6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 C4orf46Q504U0 113 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 PATE2Q6UY27 113 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 RNF182Q8N6D2 247 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 BPIFCQ8NFQ6 507 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 OR4B1Q8NGF8 309 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 OR1B1Q8NGR6 318 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 SMIM8Q96KF7 97 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 UHRF2Q96PU4 802 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 SHANK2-AS3Q9BTD1 123 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 RSG1Q9BU20 258 aa6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 SLC25A39Q9BZJ4 359 aaPredicted RBP6.64□□□□□ -1.35
VIPAS39-207ENST00000555854 C11orf1Q9H5F2 150 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms