RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 CELA1Q9UNI1 258 aa17.64■□□□□ 0.41
PRKCH-216ENST00000555542 RCL1Q9Y2P8 373 aaKnown RBP17.64■□□□□ 0.41
PRKCH-216ENST00000555542 EPPK1P58107 5090 aaKnown RBP17.64■□□□□ 0.41
PRKCH-216ENST00000555542 H3BRN7 92 aa17.63■□□□□ 0.41
PRKCH-216ENST00000555542 DEDDO75618 318 aa17.63■□□□□ 0.41
PRKCH-216ENST00000555542 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.63■□□□□ 0.41
PRKCH-216ENST00000555542 ZNF767PQ75MW2 155 aa17.63■□□□□ 0.41
PRKCH-216ENST00000555542 S100A7AQ86SG5 101 aa17.63■□□□□ 0.41
PRKCH-216ENST00000555542 RPP25LQ8N5L8 163 aaKnown RBP17.63■□□□□ 0.41
PRKCH-216ENST00000555542 C20orf173Q96LM9 149 aa17.63■□□□□ 0.41
PRKCH-216ENST00000555542 CLUHP3Q96NS8 147 aa17.63■□□□□ 0.41
PRKCH-216ENST00000555542 SLC35B3Q9H1N7 401 aa17.63■□□□□ 0.41
PRKCH-216ENST00000555542 A0A0J9YX75 114 aa17.62■□□□□ 0.41
PRKCH-216ENST00000555542 C5orf51A6NDU8 294 aa17.62■□□□□ 0.41
PRKCH-216ENST00000555542 MBPP02686 304 aaPredicted RBP17.62■□□□□ 0.41
PRKCH-216ENST00000555542 EMP1P54849 157 aa17.62■□□□□ 0.41
PRKCH-216ENST00000555542 TEPPQ6URK8 271 aa17.62■□□□□ 0.41
PRKCH-216ENST00000555542 ZNF705AQ6ZN79 300 aaPredicted RBP17.62■□□□□ 0.41
PRKCH-216ENST00000555542 ZNF709Q8N972 641 aa17.62■□□□□ 0.41
PRKCH-216ENST00000555542 SHANK2-AS3Q9BTD1 123 aa17.62■□□□□ 0.41
PRKCH-216ENST00000555542 CCDC32Q9BV29 185 aa17.62■□□□□ 0.41
PRKCH-216ENST00000555542 LSM5Q9Y4Y9 91 aaKnown RBP17.62■□□□□ 0.41
PRKCH-216ENST00000555542 FNDC10F2Z333 226 aa17.61■□□□□ 0.41
PRKCH-216ENST00000555542 RPL7P18124 248 aaKnown RBP17.61■□□□□ 0.41
PRKCH-216ENST00000555542 SLC38A11Q08AI6 406 aa17.61■□□□□ 0.41
PRKCH-216ENST00000555542 ARL6Q9H0F7 186 aa17.61■□□□□ 0.41
PRKCH-216ENST00000555542 GOLT1BQ9Y3E0 138 aa17.61■□□□□ 0.41
PRKCH-216ENST00000555542 C7orf66A4D0T2 115 aa17.6■□□□□ 0.41
PRKCH-216ENST00000555542 SMIM9A6NGZ8 99 aa17.6■□□□□ 0.41
PRKCH-216ENST00000555542 BCAP31P51572 246 aa17.6■□□□□ 0.41
PRKCH-216ENST00000555542 IGFL4Q6B9Z1 124 aa17.6■□□□□ 0.41
PRKCH-216ENST00000555542 ZNF431Q8TF32 576 aaPredicted RBP17.6■□□□□ 0.41
PRKCH-216ENST00000555542 UHRF2Q96PU4 802 aa17.6■□□□□ 0.41
PRKCH-216ENST00000555542 NEU1Q99519 415 aa17.6■□□□□ 0.41
PRKCH-216ENST00000555542 SEC22CQ9BRL7 303 aa17.6■□□□□ 0.41
PRKCH-216ENST00000555542 TMEM189A5PLL7 270 aa17.59■□□□□ 0.41
PRKCH-216ENST00000555542 ZNF705FA8MVS1 300 aaPredicted RBP17.59■□□□□ 0.41
PRKCH-216ENST00000555542 GOSR2O14653 212 aa17.59■□□□□ 0.41
PRKCH-216ENST00000555542 ZNF705DP0CH99 300 aaPredicted RBP17.59■□□□□ 0.41
PRKCH-216ENST00000555542 ZNF705BP0CI00 300 aaPredicted RBP17.59■□□□□ 0.41
PRKCH-216ENST00000555542 PLP1P60201 277 aa17.59■□□□□ 0.41
PRKCH-216ENST00000555542 C12orf74Q32Q52 190 aa17.59■□□□□ 0.41
PRKCH-216ENST00000555542 APLNQ9ULZ1 77 aa17.59■□□□□ 0.41
PRKCH-216ENST00000555542 RFNGQ9Y644 331 aa17.59■□□□□ 0.41
PRKCH-216ENST00000555542 IGHV4-4A0A075B6R2 117 aa17.58■□□□□ 0.4
PRKCH-216ENST00000555542 DEFB131BA0A096LNP1 70 aa17.58■□□□□ 0.4
PRKCH-216ENST00000555542 H2AFB2P0C5Z0 115 aa17.58■□□□□ 0.4
PRKCH-216ENST00000555542 ZNF546Q86UE3 836 aa17.58■□□□□ 0.4
PRKCH-216ENST00000555542 C12orf45Q8N5I9 185 aaPredicted RBP17.58■□□□□ 0.4
PRKCH-216ENST00000555542 RNF182Q8N6D2 247 aa17.58■□□□□ 0.4
PRKCH-216ENST00000555542 ZNF738Q8NE65 137 aa17.58■□□□□ 0.4
PRKCH-216ENST00000555542 LRRC20Q8TCA0 184 aa17.58■□□□□ 0.4
PRKCH-216ENST00000555542 C17orf77Q96MU5 243 aa17.58■□□□□ 0.4
PRKCH-216ENST00000555542 GGACTQ9BVM4 153 aa17.58■□□□□ 0.4
PRKCH-216ENST00000555542 RNF24Q9Y225 148 aa17.58■□□□□ 0.4
PRKCH-216ENST00000555542 FAM240BA0A1B0GVZ2 78 aa17.57■□□□□ 0.4
PRKCH-216ENST00000555542 DUSP14O95147 198 aaKnown RBP17.57■□□□□ 0.4
PRKCH-216ENST00000555542 SPART-AS1P0CW21 52 aa17.57■□□□□ 0.4
PRKCH-216ENST00000555542 CAV2P51636 162 aa17.57■□□□□ 0.4
PRKCH-216ENST00000555542 TMEM208Q9BTX3 173 aa17.57■□□□□ 0.4
PRKCH-216ENST00000555542 ARV1Q9H2C2 271 aa17.57■□□□□ 0.4
PRKCH-216ENST00000555542 K7EPK0 472 aa17.56■□□□□ 0.4
PRKCH-216ENST00000555542 HBE1P02100 147 aa17.56■□□□□ 0.4
PRKCH-216ENST00000555542 ARL16Q0P5N6 197 aa17.56■□□□□ 0.4
PRKCH-216ENST00000555542 MZT2BQ6NZ67 158 aa17.56■□□□□ 0.4
PRKCH-216ENST00000555542 TRAV8-2A0A0B4J237 113 aa17.55■□□□□ 0.4
PRKCH-216ENST00000555542 AGPAT2O15120 278 aa17.55■□□□□ 0.4
PRKCH-216ENST00000555542 PVALBP20472 110 aaPredicted RBP17.55■□□□□ 0.4
PRKCH-216ENST00000555542 CNN1P51911 297 aaKnown RBP17.55■□□□□ 0.4
PRKCH-216ENST00000555542 S100A10P60903 97 aa17.55■□□□□ 0.4
PRKCH-216ENST00000555542 PXDC1Q5TGL8 231 aa17.55■□□□□ 0.4
PRKCH-216ENST00000555542 S100ZQ8WXG8 99 aa17.55■□□□□ 0.4
PRKCH-216ENST00000555542 COX7A2P2O60397 106 aa17.54■□□□□ 0.4
PRKCH-216ENST00000555542 C2orf50Q96LR7 162 aa17.54■□□□□ 0.4
PRKCH-216ENST00000555542 RNF126Q9BV68 326 aa17.54■□□□□ 0.4
PRKCH-216ENST00000555542 TEX48A0A1B0GUV7 120 aa17.53■□□□□ 0.4
PRKCH-216ENST00000555542 RAB31Q13636 194 aa17.53■□□□□ 0.4
PRKCH-216ENST00000555542 SPINK13Q1W4C9 94 aa17.53■□□□□ 0.4
PRKCH-216ENST00000555542 RRN3P1Q2M238 152 aa17.53■□□□□ 0.4
PRKCH-216ENST00000555542 PATE2Q6UY27 113 aa17.53■□□□□ 0.4
PRKCH-216ENST00000555542 LINC00305Q7Z4B0 112 aa17.53■□□□□ 0.4
PRKCH-216ENST00000555542 C1orf158Q8N1D5 194 aa17.53■□□□□ 0.4
PRKCH-216ENST00000555542 IGF2BP2-AS1Q96M15 143 aa17.53■□□□□ 0.4
PRKCH-216ENST00000555542 PPP1R14DQ9NXH3 145 aa17.53■□□□□ 0.4
PRKCH-216ENST00000555542 A0A087X0K7 114 aa17.52■□□□□ 0.4
PRKCH-216ENST00000555542 LOC102723971A0A1B0GUV8 181 aa17.52■□□□□ 0.4
PRKCH-216ENST00000555542 CST7O76096 145 aa17.52■□□□□ 0.4
PRKCH-216ENST00000555542 AMBPP02760 352 aa17.52■□□□□ 0.4
PRKCH-216ENST00000555542 PRR20EP86478 221 aa17.52■□□□□ 0.4
PRKCH-216ENST00000555542 PRR20CP86479 221 aa17.52■□□□□ 0.4
PRKCH-216ENST00000555542 PRR20DP86480 221 aa17.52■□□□□ 0.4
PRKCH-216ENST00000555542 PRR20BP86481 221 aa17.52■□□□□ 0.4
PRKCH-216ENST00000555542 PRR20AP86496 221 aa17.52■□□□□ 0.4
PRKCH-216ENST00000555542 LINC00299Q6ZSB3 139 aa17.52■□□□□ 0.4
PRKCH-216ENST00000555542 OR11H7Q8NGC8 314 aa17.52■□□□□ 0.4
PRKCH-216ENST00000555542 MGST2Q99735 147 aa17.52■□□□□ 0.4
PRKCH-216ENST00000555542 FAM24AA6NFZ4 105 aa17.51■□□□□ 0.39
PRKCH-216ENST00000555542 M0R2Z0 102 aa17.51■□□□□ 0.39
PRKCH-216ENST00000555542 INSP01308 110 aa17.51■□□□□ 0.39
PRKCH-216ENST00000555542 RHOBP62745 196 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms