RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 TRAV8-2A0A0B4J237 113 aa9.94□□□□□ -0.82
SNX6-203ENST00000555416 IGKV3-20P01619 116 aa9.94□□□□□ -0.82
SNX6-203ENST00000555416 PRB4P10163 310 aaPredicted RBP9.94□□□□□ -0.82
SNX6-203ENST00000555416 HLA-DRB4P13762 266 aa9.94□□□□□ -0.82
SNX6-203ENST00000555416 GALR1P47211 349 aa9.94□□□□□ -0.82
SNX6-203ENST00000555416 PSMB3P49720 205 aa9.94□□□□□ -0.82
SNX6-203ENST00000555416 SULT1A1P50225 295 aa9.94□□□□□ -0.82
SNX6-203ENST00000555416 VWC2Q2TAL6 325 aa9.94□□□□□ -0.82
SNX6-203ENST00000555416 LRRC37A5PQ49AS3 106 aa9.94□□□□□ -0.82
SNX6-203ENST00000555416 WDR83OSQ9Y284 106 aa9.94□□□□□ -0.82
SNX6-203ENST00000555416 HLA-DRB4X5D2U9 266 aa9.94□□□□□ -0.82
SNX6-203ENST00000555416 DYNC2H1Q8NCM8 4307 aaKnown RBP9.93□□□□□ -0.82
SNX6-203ENST00000555416 ISLRO14498 428 aa9.93□□□□□ -0.82
SNX6-203ENST00000555416 MRPS12O15235 138 aaKnown RBP9.93□□□□□ -0.82
SNX6-203ENST00000555416 SPP1P10451 314 aa9.93□□□□□ -0.82
SNX6-203ENST00000555416 PVALBP20472 110 aaPredicted RBP9.93□□□□□ -0.82
SNX6-203ENST00000555416 FXYD7P58549 80 aa9.93□□□□□ -0.82
SNX6-203ENST00000555416 RAP2BP61225 183 aa9.93□□□□□ -0.82
SNX6-203ENST00000555416 NHLH2Q02577 135 aa9.93□□□□□ -0.82
SNX6-203ENST00000555416 MIC13Q5XKP0 118 aa9.93□□□□□ -0.82
SNX6-203ENST00000555416 MORN3Q6PF18 240 aaPredicted RBP9.93□□□□□ -0.82
SNX6-203ENST00000555416 ZNF546Q86UE3 836 aa9.93□□□□□ -0.82
SNX6-203ENST00000555416 RNF182Q8N6D2 247 aa9.93□□□□□ -0.82
SNX6-203ENST00000555416 TMEM37Q8WXS4 190 aa9.93□□□□□ -0.82
SNX6-203ENST00000555416 RNF126Q9BV68 326 aa9.93□□□□□ -0.82
SNX6-203ENST00000555416 NMES1Q9C002 83 aa9.93□□□□□ -0.82
SNX6-203ENST00000555416 ARV1Q9H2C2 271 aa9.93□□□□□ -0.82
SNX6-203ENST00000555416 SAV1Q9H4B6 383 aaPredicted RBP9.93□□□□□ -0.82
SNX6-203ENST00000555416 UQCC1Q9NVA1 299 aa9.93□□□□□ -0.82
SNX6-203ENST00000555416 UBE2L5PA0A1B0GUS4 154 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 SNRPCP09234 159 aaKnown RBP9.92□□□□□ -0.82
SNX6-203ENST00000555416 HLA-DMBP28068 263 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 ID1P41134 155 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 CAMLGP49069 296 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 PRR20EP86478 221 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 PRR20CP86479 221 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 PRR20DP86480 221 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 PRR20BP86481 221 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 PRR20AP86496 221 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 PMS2P11Q13670 270 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 Q8NAQ8 132 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 C16orf92Q96LL3 132 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 XCL2Q9UBD3 114 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 X6R8D5 127 aa9.92□□□□□ -0.82
SNX6-203ENST00000555416 RYR2Q92736 4967 aa9.91□□□□□ -0.82
SNX6-203ENST00000555416 A0A0J9YX75 114 aa9.91□□□□□ -0.82
SNX6-203ENST00000555416 SSNA1O43805 119 aa9.91□□□□□ -0.82
SNX6-203ENST00000555416 RBMY1A1P0DJD3 496 aaKnown RBP9.91□□□□□ -0.82
SNX6-203ENST00000555416 RBMY1CP0DJD4 496 aa9.91□□□□□ -0.82
SNX6-203ENST00000555416 S100A11P31949 105 aa9.91□□□□□ -0.82
SNX6-203ENST00000555416 FGL1Q08830 312 aa9.91□□□□□ -0.82
SNX6-203ENST00000555416 RBMY1FQ15415 496 aaKnown RBP9.91□□□□□ -0.82
SNX6-203ENST00000555416 FAM78BQ5VT40 261 aa9.91□□□□□ -0.82
SNX6-203ENST00000555416 FOXI2Q6ZQN5 318 aa9.91□□□□□ -0.82
SNX6-203ENST00000555416 LINC00305Q7Z4B0 112 aa9.91□□□□□ -0.82
SNX6-203ENST00000555416 ZNF709Q8N972 641 aa9.91□□□□□ -0.82
SNX6-203ENST00000555416 PPP1R1CQ8WVI7 109 aa9.91□□□□□ -0.82
SNX6-203ENST00000555416 GPR82Q96P67 336 aa9.91□□□□□ -0.82
SNX6-203ENST00000555416 ALG5Q9Y673 324 aa9.91□□□□□ -0.82
SNX6-203ENST00000555416 LYSTQ99698 3801 aa9.9□□□□□ -0.82
SNX6-203ENST00000555416 TRAV5A0A0B4J249 113 aa9.9□□□□□ -0.82
SNX6-203ENST00000555416 IGHV4-28A0A0C4DH34 117 aa9.9□□□□□ -0.82
SNX6-203ENST00000555416 LCE6AA0A183 80 aa9.9□□□□□ -0.82
SNX6-203ENST00000555416 ZNF705EA8MWA4 302 aaPredicted RBP9.9□□□□□ -0.82
SNX6-203ENST00000555416 ZNF705DP0CH99 300 aaPredicted RBP9.9□□□□□ -0.82
SNX6-203ENST00000555416 ZNF705BP0CI00 300 aaPredicted RBP9.9□□□□□ -0.82
SNX6-203ENST00000555416 RPL7P18124 248 aaKnown RBP9.9□□□□□ -0.82
SNX6-203ENST00000555416 MEOX2P50222 304 aa9.9□□□□□ -0.82
SNX6-203ENST00000555416 OPCMLQ14982 345 aa9.9□□□□□ -0.82
SNX6-203ENST00000555416 STX12Q86Y82 276 aa9.9□□□□□ -0.82
SNX6-203ENST00000555416 OR4B1Q8NGF8 309 aa9.9□□□□□ -0.82
SNX6-203ENST00000555416 SLC35B3Q9H1N7 401 aa9.9□□□□□ -0.82
SNX6-203ENST00000555416 C11orf68Q9H3H3 251 aaKnown RBP9.9□□□□□ -0.82
SNX6-203ENST00000555416 A0A087X0K7 114 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 CXorf65A6NEN9 183 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 E5RGE8 158 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 H3BTX0 84 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 COX7A2P2O60397 106 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 ATF4P18848 351 aaPredicted RBP9.89□□□□□ -0.83
SNX6-203ENST00000555416 CXCL3P19876 107 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 FGF7P21781 194 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 NANOS2P60321 138 aaKnown RBP9.89□□□□□ -0.83
SNX6-203ENST00000555416 HBG1P69891 147 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 HBG2P69892 147 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 BAXQ07812 192 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 PXDC1Q5TGL8 231 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 C10orf113Q5VZT2 155 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 AMTNQ6UX39 209 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 OR5C1Q8NGR4 320 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 THAP6Q8TBB0 222 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 SACSQ9NZJ4 4579 aa9.89□□□□□ -0.83
SNX6-203ENST00000555416 ELOA3CA0A087WX78 387 aaPredicted RBP9.88□□□□□ -0.83
SNX6-203ENST00000555416 A8MTW9 85 aa9.88□□□□□ -0.83
SNX6-203ENST00000555416 SLC17A3O00476 420 aa9.88□□□□□ -0.83
SNX6-203ENST00000555416 MPC2O95563 127 aa9.88□□□□□ -0.83
SNX6-203ENST00000555416 RLN2P04090 185 aa9.88□□□□□ -0.83
SNX6-203ENST00000555416 RPL29P47914 159 aaKnown RBP9.88□□□□□ -0.83
SNX6-203ENST00000555416 CYCSP99999 105 aaKnown RBP9.88□□□□□ -0.83
SNX6-203ENST00000555416 CLINT1Q14677 625 aa9.88□□□□□ -0.83
SNX6-203ENST00000555416 TMEM41BQ5BJD5 291 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms