RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ACOT6Q3I5F7 207 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-219ENST00000555323 FAM78BQ5VT40 261 aa9.5□□□□□ -0.89
SYNE2-219ENST00000555323 MORN5Q5VZ52 161 aa9.5□□□□□ -0.89
SYNE2-219ENST00000555323 STOML3Q8TAV4 291 aa9.5□□□□□ -0.89
SYNE2-219ENST00000555323 DCANP1Q8TF63 244 aa9.5□□□□□ -0.89
SYNE2-219ENST00000555323 MRPL32Q9BYC8 188 aaKnown RBP9.5□□□□□ -0.89
SYNE2-219ENST00000555323 SLC25A32Q9H2D1 315 aa9.5□□□□□ -0.89
SYNE2-219ENST00000555323 MS4A6AQ9H2W1 248 aa9.5□□□□□ -0.89
SYNE2-219ENST00000555323 SEPSECSQ9HD40 501 aaKnown RBP9.5□□□□□ -0.89
SYNE2-219ENST00000555323 SELENOKQ9Y6D0 94 aa9.5□□□□□ -0.89
SYNE2-219ENST00000555323 SMAD5-AS1Q9Y6J3 95 aa9.5□□□□□ -0.89
SYNE2-219ENST00000555323 SORL1Q92673 2214 aa9.5□□□□□ -0.89
SYNE2-219ENST00000555323 PFDN1O60925 122 aa9.49□□□□□ -0.89
SYNE2-219ENST00000555323 MBP02144 154 aa9.49□□□□□ -0.89
SYNE2-219ENST00000555323 SEC11BP0C7V7 166 aa9.49□□□□□ -0.89
SYNE2-219ENST00000555323 LEMD1Q68G75 181 aa9.49□□□□□ -0.89
SYNE2-219ENST00000555323 Q8N1Y9 231 aa9.49□□□□□ -0.89
SYNE2-219ENST00000555323 C17orf77Q96MU5 243 aa9.49□□□□□ -0.89
SYNE2-219ENST00000555323 FAM110AQ9BQ89 295 aa9.49□□□□□ -0.89
SYNE2-219ENST00000555323 ZNF471Q9BX82 626 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-219ENST00000555323 SH3BGRL3Q9H299 93 aa9.49□□□□□ -0.89
SYNE2-219ENST00000555323 SLC25A22Q9H936 323 aa9.49□□□□□ -0.89
SYNE2-219ENST00000555323 OR4C46A6NHA9 309 aa9.48□□□□□ -0.89
SYNE2-219ENST00000555323 K7EQG2 157 aa9.48□□□□□ -0.89
SYNE2-219ENST00000555323 GALR1P47211 349 aa9.48□□□□□ -0.89
SYNE2-219ENST00000555323 CMC4P56277 68 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-219ENST00000555323 RPL11P62913 178 aaKnown RBP9.48□□□□□ -0.89
SYNE2-219ENST00000555323 GUCA2BQ16661 112 aa9.48□□□□□ -0.89
SYNE2-219ENST00000555323 BPIFA4PQ86YQ2 179 aa9.48□□□□□ -0.89
SYNE2-219ENST00000555323 BAP18Q8IXM2 172 aa9.48□□□□□ -0.89
SYNE2-219ENST00000555323 RPP25LQ8N5L8 163 aaKnown RBP9.48□□□□□ -0.89
SYNE2-219ENST00000555323 FAM167A-AS1Q96KT0 104 aa9.48□□□□□ -0.89
SYNE2-219ENST00000555323 NRN1Q9NPD7 142 aa9.48□□□□□ -0.89
SYNE2-219ENST00000555323 C19orf73Q9NVV2 129 aa9.48□□□□□ -0.89
SYNE2-219ENST00000555323 TMEM14CQ9P0S9 112 aa9.48□□□□□ -0.89
SYNE2-219ENST00000555323 FUT9Q9Y231 359 aa9.48□□□□□ -0.89
SYNE2-219ENST00000555323 IGKV3-7A0A075B6H7 116 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 A0A087X0K7 114 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 TRAV5A0A0B4J249 113 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 DNASE2O00115 360 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-219ENST00000555323 TPT1P13693 172 aaKnown RBP9.47□□□□□ -0.89
SYNE2-219ENST00000555323 C4BPBP20851 252 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 MEOX2P50222 304 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 RHOBP62745 196 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 MIR17HGQ75NE6 70 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 SLC51BQ86UW2 128 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 GBGT1Q8N5D6 347 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 OR10G4Q8NGN3 311 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 OR10G9Q8NGN4 311 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 OR10G7Q8NGN6 311 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 HRH4Q9H3N8 390 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 RPRMQ9NS64 109 aa9.47□□□□□ -0.89
SYNE2-219ENST00000555323 AURKAIP1Q9NWT8 199 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-219ENST00000555323 DNAH3Q8TD57 4116 aa9.46□□□□□ -0.89
SYNE2-219ENST00000555323 SOCS3O14543 225 aa9.46□□□□□ -0.9
SYNE2-219ENST00000555323 CD7P09564 240 aa9.46□□□□□ -0.9
SYNE2-219ENST00000555323 IGLC2P0DOY2 106 aa9.46□□□□□ -0.9
SYNE2-219ENST00000555323 RAB2AP61019 212 aa9.46□□□□□ -0.9
SYNE2-219ENST00000555323 TMEM41BQ5BJD5 291 aa9.46□□□□□ -0.9
SYNE2-219ENST00000555323 SAMD13Q5VXD3 122 aa9.46□□□□□ -0.9
SYNE2-219ENST00000555323 SPATA31B1PQ5VZV4 182 aa9.46□□□□□ -0.9
SYNE2-219ENST00000555323 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.46□□□□□ -0.9
SYNE2-219ENST00000555323 GTSCR1Q86UQ5 136 aa9.46□□□□□ -0.9
SYNE2-219ENST00000555323 STXBP6Q8NFX7 210 aa9.46□□□□□ -0.9
SYNE2-219ENST00000555323 PRR25Q96S07 402 aa9.46□□□□□ -0.9
SYNE2-219ENST00000555323 SLC25A2Q9BXI2 301 aa9.46□□□□□ -0.9
SYNE2-219ENST00000555323 PLA2G2EQ9NZK7 142 aa9.46□□□□□ -0.9
SYNE2-219ENST00000555323 A0A1W2PPV4 95 aa9.45□□□□□ -0.9
SYNE2-219ENST00000555323 A8MZ25 164 aa9.45□□□□□ -0.9
SYNE2-219ENST00000555323 UMAD1C9J7I0 102 aa9.45□□□□□ -0.9
SYNE2-219ENST00000555323 NKX2-5P52952 324 aaPredicted RBP9.45□□□□□ -0.9
SYNE2-219ENST00000555323 TAS2R45P59539 299 aa9.45□□□□□ -0.9
SYNE2-219ENST00000555323 WFDC3Q8IUB2 231 aa9.45□□□□□ -0.9
SYNE2-219ENST00000555323 SAT2Q96F10 170 aaPredicted RBP9.45□□□□□ -0.9
SYNE2-219ENST00000555323 H3BQ15 152 aa9.44□□□□□ -0.9
SYNE2-219ENST00000555323 K7EIL1 84 aa9.44□□□□□ -0.9
SYNE2-219ENST00000555323 ISLRO14498 428 aa9.44□□□□□ -0.9
SYNE2-219ENST00000555323 HIST1H1EP10412 219 aaKnown RBP9.44□□□□□ -0.9
SYNE2-219ENST00000555323 ATF4P18848 351 aaPredicted RBP9.44□□□□□ -0.9
SYNE2-219ENST00000555323 TFPI2P48307 235 aa9.44□□□□□ -0.9
SYNE2-219ENST00000555323 CD81P60033 236 aa9.44□□□□□ -0.9
SYNE2-219ENST00000555323 GUK1Q16774 197 aa9.44□□□□□ -0.9
SYNE2-219ENST00000555323 ODF3L2Q3SX64 289 aa9.44□□□□□ -0.9
SYNE2-219ENST00000555323 AKR1C8PQ5T2L2 129 aa9.44□□□□□ -0.9
SYNE2-219ENST00000555323 EIF5AL1Q6IS14 154 aaKnown RBP9.44□□□□□ -0.9
SYNE2-219ENST00000555323 FAM24BQ8N5W8 94 aa9.44□□□□□ -0.9
SYNE2-219ENST00000555323 RAB24Q969Q5 203 aa9.44□□□□□ -0.9
SYNE2-219ENST00000555323 ZNF503Q96F45 646 aa9.44□□□□□ -0.9
SYNE2-219ENST00000555323 ACTR3CQ9C0K3 210 aaPredicted RBP9.44□□□□□ -0.9
SYNE2-219ENST00000555323 OR51M1Q9H341 326 aa9.44□□□□□ -0.9
SYNE2-219ENST00000555323 ZNF586Q9NXT0 402 aa9.44□□□□□ -0.9
SYNE2-219ENST00000555323 ZNF253O75346 499 aa9.43□□□□□ -0.9
SYNE2-219ENST00000555323 STAG3L2P0CL84 134 aa9.43□□□□□ -0.9
SYNE2-219ENST00000555323 STAG3L3P0CL85 134 aa9.43□□□□□ -0.9
SYNE2-219ENST00000555323 ID1P41134 155 aa9.43□□□□□ -0.9
SYNE2-219ENST00000555323 CDC34P49427 236 aaPredicted RBP9.43□□□□□ -0.9
SYNE2-219ENST00000555323 PSMB3P49720 205 aa9.43□□□□□ -0.9
SYNE2-219ENST00000555323 PDE6HQ13956 83 aa9.43□□□□□ -0.9
SYNE2-219ENST00000555323 KHDC3LQ587J8 217 aa9.43□□□□□ -0.9
SYNE2-219ENST00000555323 FAM122CQ6P4D5 195 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms