RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 HIST1H1EP10412 219 aaKnown RBP5.85□□□□□ -1.47
TDP1-209ENST00000554180 MEOX2P50222 304 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 CCL20P78556 96 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 SRSF2Q01130 221 aaKnown RBP5.85□□□□□ -1.47
TDP1-209ENST00000554180 KLF5Q13887 457 aaPredicted RBP5.85□□□□□ -1.47
TDP1-209ENST00000554180 PDE6HQ13956 83 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 GUK1Q16774 197 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 AWAT1Q58HT5 328 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 ZNF506Q5JVG8 444 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 C18orf65Q6ZTR6 163 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 C8orf86Q6ZUL3 223 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 OR11H1Q8NG94 326 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 OR4F17Q8NGA8 305 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 DPF1Q92782 380 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 GRAMD2BQ96HH9 432 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 OR4F4Q96R69 305 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 ELOVL1Q9BW60 279 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 NKX6-2Q9C056 277 aaPredicted RBP5.85□□□□□ -1.47
TDP1-209ENST00000554180 GNG13Q9P2W3 67 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 IGHV3OR16-8A0A075B7F1 116 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 IGHV7-4-1A0A0J9YVY3 117 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 LOC102723971A0A1B0GUV8 181 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 A0A1W2PRE2 83 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 ZNF320A2RRD8 509 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 TMEM213A2RRL7 107 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 RBFOX3A6NFN3 312 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 ADARB2-AS1A8MUL3 147 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 CCL24O00175 119 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 MRPS12O15235 138 aaKnown RBP5.84□□□□□ -1.47
TDP1-209ENST00000554180 EIF3GO75821 320 aaKnown RBP eCLIP5.84□□□□□ -1.47
TDP1-209ENST00000554180 CD5P06127 495 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 OR10J4P0C629 311 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 IGLC2P0DOY2 106 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 GALR1P47211 349 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 SYNJ2BPP57105 145 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 PEA15Q15121 130 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 DEFB136Q30KP8 78 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 TOR2AQ5JU69 321 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 LEMD1Q68G75 181 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 IQCF2Q8IXL9 164 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 OR8I2Q8N0Y5 310 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 C11orf44Q8N8P7 122 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 FXYD5Q96DB9 178 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 RAX2Q96IS3 184 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 TCEAL7Q9BRU2 100 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 EIF5A2Q9GZV4 153 aaKnown RBP5.84□□□□□ -1.47
TDP1-209ENST00000554180 TMPRSS5Q9H3S3 457 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 PEMTQ9UBM1 199 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 VAX2Q9UIW0 290 aa5.84□□□□□ -1.47
TDP1-209ENST00000554180 WNK1Q9H4A3 2382 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 A0A087X0K7 114 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 A0A1W2PRX2 142 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 HELTA6NFD8 242 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 FAM74A7A6NL05 159 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 TMEM250H0YL14 139 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 M0QZ24 198 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 PDE6DO43924 150 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 ZNF253O75346 499 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 NBEAP1P0C6P0 100 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 PYYP10082 97 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 MYCNOSP40205 109 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 MEF2BQ02080 365 aaPredicted RBP5.83□□□□□ -1.48
TDP1-209ENST00000554180 ICAM4Q14773 271 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 HAGHQ16775 308 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 KRTAP24-1Q3LI83 254 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 SAMD13Q5VXD3 122 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 C16orf54Q6UWD8 224 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 SIGLEC15Q6ZMC9 328 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 PRIMA1Q86XR5 153 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 LYPD1Q8N2G4 141 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 OR9G4Q8NGQ1 327 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 GLMPQ8WWB7 406 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 CITED1Q99966 193 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 RHPN1-AS1Q9BWJ2 59 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 SMPXQ9UHP9 88 aa5.83□□□□□ -1.48
TDP1-209ENST00000554180 TRBV19A0A075B6N1 114 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 C2orf70A6NJV1 201 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 C11orf94C9JXX5 98 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 H3BQ15 152 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 CHEK1O14757 476 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 ZNF207O43670 478 aaKnown RBP5.82□□□□□ -1.48
TDP1-209ENST00000554180 PAGE4O60829 102 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 APOHP02749 345 aaPredicted RBP5.82□□□□□ -1.48
TDP1-209ENST00000554180 ATF4P18848 351 aaPredicted RBP5.82□□□□□ -1.48
TDP1-209ENST00000554180 SLURP1P55000 103 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 KRTAP10-3P60369 221 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 TM4SF20Q53R12 229 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 SLC7A5P1Q8MH63 180 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 TMEM158Q8WZ71 300 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 SLC35B3Q9H1N7 401 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 ZNF586Q9NXT0 402 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 CLEC5AQ9NY25 188 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 SIGLEC8Q9NYZ4 499 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 YTHDF2Q9Y5A9 579 aaKnown RBP5.82□□□□□ -1.48
TDP1-209ENST00000554180 TENM1Q9UKZ4 2725 aa5.82□□□□□ -1.48
TDP1-209ENST00000554180 COL6A5A8TX70 2615 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 IGHV3OR16-13A0A075B7E8 117 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 IGHV3-74A0A0B4J1X5 117 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 GGTLC3B5MD39 225 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 KRBOX1C9JBD0 128 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms