RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 OBP2AQ9NY56 170 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 IGHV5-51A0A0C4DH38 117 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 C15orf61A6NNL5 157 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 A8MWV9 139 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 D6R8Y8 96 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 ZNHIT1O43257 154 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 HOXA3O43365 443 aaPredicted RBP7.61□□□□□ -1.19
SIX4-202ENST00000554079 PROP1O75360 226 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 IGHG3P01860 377 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 PCBD1P61457 104 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 ZFP2Q6ZN57 461 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 ZNF493Q6ZR52 646 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 WFDC3Q8IUB2 231 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 C3orf56Q8N813 242 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 NFAM1Q8NET5 270 aaPredicted RBP7.61□□□□□ -1.19
SIX4-202ENST00000554079 OR10J6PQ8NGY7 276 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 FMC1Q96HJ9 113 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 FOXB1Q99853 325 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 SIGLEC9Q9Y336 463 aa7.61□□□□□ -1.19
SIX4-202ENST00000554079 A0A1W2PPI3 338 aa7.6□□□□□ -1.19
SIX4-202ENST00000554079 J3QT63 122 aa7.6□□□□□ -1.19
SIX4-202ENST00000554079 NGFP01138 241 aa7.6□□□□□ -1.19
SIX4-202ENST00000554079 KIR2DS2P43631 304 aa7.6□□□□□ -1.19
SIX4-202ENST00000554079 LY6DQ14210 128 aa7.6□□□□□ -1.19
SIX4-202ENST00000554079 ZC2HC1BQ5TFG8 222 aa7.6□□□□□ -1.19
SIX4-202ENST00000554079 ASCC3Q8N3C0 2202 aaKnown RBP7.6□□□□□ -1.19
SIX4-202ENST00000554079 TMEM30CPA0ZSE6 113 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 TMEM213A2RRL7 107 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 C5orf67F2Z3F1 127 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 RPL7P18124 248 aaKnown RBP7.59□□□□□ -1.19
SIX4-202ENST00000554079 GLRXP35754 106 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 GFERP55789 205 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 ERVK-16P61578 105 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 RFESDQ8TAC1 157 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 NGBQ9NPG2 151 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 FOXA2Q9Y261 457 aaPredicted RBP7.59□□□□□ -1.19
SIX4-202ENST00000554079 TMSB15BA0A087X1C1 80 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 LOC107984640A0A0U1RRK4 108 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 MYMXA0A1B0GTQ4 84 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 OOEPA6NGQ2 149 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 TCL1BO95988 128 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 FCER1GP30273 86 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 UBE2D1P51668 147 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 TBC1D28Q2M2D7 210 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 PATE2Q6UY27 113 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 Q71RC1 249 aaPredicted RBP7.59□□□□□ -1.19
SIX4-202ENST00000554079 MAFAQ8NHW3 353 aaPredicted RBP7.59□□□□□ -1.19
SIX4-202ENST00000554079 ODF3Q96PU9 254 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 SRXN1Q9BYN0 137 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 TMEM14BQ9NUH8 114 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 C21orf62Q9NYP8 219 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 FZR1Q9UM11 496 aa7.59□□□□□ -1.19
SIX4-202ENST00000554079 CHD9Q3L8U1 2897 aa7.58□□□□□ -1.2
SIX4-202ENST00000554079 LINC01546A6NGU7 62 aa7.58□□□□□ -1.2
SIX4-202ENST00000554079 LINC01549A6NIU2 74 aa7.58□□□□□ -1.2
SIX4-202ENST00000554079 ZNF785A8K8V0 405 aa7.58□□□□□ -1.2
SIX4-202ENST00000554079 C15orf65H3BRN8 121 aa7.58□□□□□ -1.2
SIX4-202ENST00000554079 DPM2O94777 84 aa7.58□□□□□ -1.2
SIX4-202ENST00000554079 TGFAP01135 160 aa7.58□□□□□ -1.2
SIX4-202ENST00000554079 ATP5IP56385 69 aaPredicted RBP7.58□□□□□ -1.2
SIX4-202ENST00000554079 HSPE1P61604 102 aaKnown RBP7.58□□□□□ -1.2
SIX4-202ENST00000554079 Q86TA4 180 aa7.58□□□□□ -1.2
SIX4-202ENST00000554079 C11orf53Q8IXP5 236 aa7.58□□□□□ -1.2
SIX4-202ENST00000554079 LRRC75A-AS1Q8N1F1 130 aa7.58□□□□□ -1.2
SIX4-202ENST00000554079 PRNDQ9UKY0 176 aa7.58□□□□□ -1.2
SIX4-202ENST00000554079 IGHV3-43A0A0B4J1X8 118 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 PGPA6NDG6 321 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 IGHV3-43DP0DP04 118 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 ZNF542PQ5EBM4 170 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 FAM19A5Q7Z5A7 132 aaPredicted RBP7.57□□□□□ -1.2
SIX4-202ENST00000554079 PDPNQ86YL7 162 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 ORMDL3Q8N138 153 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 SLC22A18ASQ8N1D0 253 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 OR1L8Q8NGR8 309 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 BAALCQ8WXS3 180 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 PRRG4Q9BZD6 226 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 PROK2Q9HC23 129 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 ENY2Q9NPA8 101 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 CHD7Q9P2D1 2997 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 COL6A3P12111 3177 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 TRAV8-2A0A0B4J237 113 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 LOC107984156A0A0G2JMH3 177 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 A0A0J9YW62 118 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 EPOPA6NHQ4 379 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 PSPNO60542 156 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 DKK1O94907 266 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 CFIP05156 583 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 YPEL5P62699 121 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 PLGLB1Q02325 96 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 TWIST1Q15672 202 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.57□□□□□ -1.2
SIX4-202ENST00000554079 LYRM7Q5U5X0 104 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 FAM104BQ5XKR9 115 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 WDR86Q86TI4 376 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 ARL17AQ8IVW1 177 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 OR13H1Q8NG92 308 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 RAXQ9Y2V3 346 aa7.57□□□□□ -1.2
SIX4-202ENST00000554079 COX7A2P2O60397 106 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 NPYP01303 97 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 TCRAP04437 139 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms