RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 FGF8P55075 233 aaPredicted RBP8.35□□□□□ -1.07
PABPN1-203ENST00000553960 PROK1P58294 105 aa8.35□□□□□ -1.07
PABPN1-203ENST00000553960 PNRC1Q12796 327 aaPredicted RBP8.35□□□□□ -1.07
PABPN1-203ENST00000553960 TMEM95Q3KNT9 176 aa8.35□□□□□ -1.07
PABPN1-203ENST00000553960 SOHLH1Q5JUK2 328 aa8.35□□□□□ -1.07
PABPN1-203ENST00000553960 FAM90A2PQ658T7 463 aa8.35□□□□□ -1.07
PABPN1-203ENST00000553960 SVBPQ8N300 66 aa8.35□□□□□ -1.07
PABPN1-203ENST00000553960 HIST1H2BAQ96A08 127 aa8.35□□□□□ -1.07
PABPN1-203ENST00000553960 UHRF2Q96PU4 802 aa8.35□□□□□ -1.07
PABPN1-203ENST00000553960 METTL26Q96S19 204 aa8.35□□□□□ -1.07
PABPN1-203ENST00000553960 RARRES2Q99969 163 aa8.35□□□□□ -1.07
PABPN1-203ENST00000553960 ELOVL1Q9BW60 279 aa8.35□□□□□ -1.07
PABPN1-203ENST00000553960 TMPRSS5Q9H3S3 457 aa8.35□□□□□ -1.07
PABPN1-203ENST00000553960 DAZ1Q9NQZ3 744 aaKnown RBP8.35□□□□□ -1.07
PABPN1-203ENST00000553960 TRBV19A0A075B6N1 114 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 ZNF785A8K8V0 405 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 B4DEV8 164 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 C9JCJ5 164 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 INAFM1C9JVW0 142 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 C11orf94C9JXX5 98 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 RPLP1P05386 114 aaKnown RBP8.34□□□□□ -1.07
PABPN1-203ENST00000553960 ADCYAP1P18509 176 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 BMI1P35226 326 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 UBE2L3P68036 154 aaKnown RBP8.34□□□□□ -1.07
PABPN1-203ENST00000553960 FHL3Q13643 280 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 KLF5Q13887 457 aaPredicted RBP8.34□□□□□ -1.07
PABPN1-203ENST00000553960 HAGHQ16775 308 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 TCTEX1D4Q5JR98 221 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 C16orf54Q6UWD8 224 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 ZNF329Q86UD4 541 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 OR4F17Q8NGA8 305 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 MRPL53Q96EL3 112 aaKnown RBP8.34□□□□□ -1.07
PABPN1-203ENST00000553960 LINC00052Q96N35 136 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 OR4F4Q96R69 305 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 TMEM231Q9H6L2 316 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 TREM1Q9NP99 234 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 SIGLEC8Q9NYZ4 499 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 UFC1Q9Y3C8 167 aa8.34□□□□□ -1.07
PABPN1-203ENST00000553960 FOXL1Q12952 345 aa8.33□□□□□ -1.08
PABPN1-203ENST00000553960 C5orf17Q8NAS9 161 aa8.33□□□□□ -1.08
PABPN1-203ENST00000553960 C2CD4CQ8TF44 421 aa8.33□□□□□ -1.08
PABPN1-203ENST00000553960 GLMPQ8WWB7 406 aa8.33□□□□□ -1.08
PABPN1-203ENST00000553960 TMEM242Q9NWH2 141 aa8.33□□□□□ -1.08
PABPN1-203ENST00000553960 PPP1R14DQ9NXH3 145 aa8.33□□□□□ -1.08
PABPN1-203ENST00000553960 PRELID1Q9Y255 219 aa8.33□□□□□ -1.08
PABPN1-203ENST00000553960 YTHDF2Q9Y5A9 579 aaKnown RBP8.33□□□□□ -1.08
PABPN1-203ENST00000553960 ZFHX3Q15911 3703 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 A0A087WWC5 75 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 TRAV5A0A0B4J249 113 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 GGTLC3B5MD39 225 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 NDUFB4O95168 129 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 SNAPINO95295 136 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 TAS2R60P59551 318 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 PSG9Q00887 426 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 COX8CQ7Z4L0 72 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 C1QL4Q86Z23 238 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 CYB561D1Q8N8Q1 229 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 RXFP4Q8TDU9 374 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 GRAMD2BQ96HH9 432 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 NARS2Q96I59 477 aaKnown RBP8.32□□□□□ -1.08
PABPN1-203ENST00000553960 SLC50A1Q9BRV3 221 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 GNB4Q9HAV0 340 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 ZNF586Q9NXT0 402 aa8.32□□□□□ -1.08
PABPN1-203ENST00000553960 TRAV2A0A0B4J234 112 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 IGHV7-4-1A0A0J9YVY3 117 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 HELTA6NFD8 242 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 F8W036 122 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 H3BQ15 152 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 HMGB3O15347 200 aaKnown RBP8.31□□□□□ -1.08
PABPN1-203ENST00000553960 TRBV12-3P01733 135 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 GALR1P47211 349 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 RHEBQ15382 184 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 C10orf99Q6UWK7 81 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 SIGLEC15Q6ZMC9 328 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 C17orf77Q96MU5 243 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 NIPSNAP3BQ9BS92 247 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 TUBA4BQ9H853 241 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 SDF2L1Q9HCN8 221 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 SMPXQ9UHP9 88 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 TSSC4Q9Y5U2 329 aaPredicted RBP8.31□□□□□ -1.08
PABPN1-203ENST00000553960 S4R3C0 116 aa8.31□□□□□ -1.08
PABPN1-203ENST00000553960 RBAKDNA6NC62 111 aa8.3□□□□□ -1.08
PABPN1-203ENST00000553960 PPP5D1E7EU14 171 aa8.3□□□□□ -1.08
PABPN1-203ENST00000553960 IGHV3-23P01764 117 aa8.3□□□□□ -1.08
PABPN1-203ENST00000553960 SLC25A5P05141 298 aaKnown RBP8.3□□□□□ -1.08
PABPN1-203ENST00000553960 PYYP10082 97 aa8.3□□□□□ -1.08
PABPN1-203ENST00000553960 SUMO1P63165 101 aaKnown RBP8.3□□□□□ -1.08
PABPN1-203ENST00000553960 UNQ9165/PRO28630Q6UXU0 137 aa8.3□□□□□ -1.08
PABPN1-203ENST00000553960 OR8I2Q8N0Y5 310 aa8.3□□□□□ -1.08
PABPN1-203ENST00000553960 DUX5Q96PT3 197 aa8.3□□□□□ -1.08
PABPN1-203ENST00000553960 ATG101Q9BSB4 218 aa8.3□□□□□ -1.08
PABPN1-203ENST00000553960 ZNF331Q9NQX6 463 aaPredicted RBP8.3□□□□□ -1.08
PABPN1-203ENST00000553960 NAT8Q9UHE5 227 aa8.3□□□□□ -1.08
PABPN1-203ENST00000553960 EPDR1Q9UM22 224 aa8.3□□□□□ -1.08
PABPN1-203ENST00000553960 RNF114Q9Y508 228 aa8.3□□□□□ -1.08
PABPN1-203ENST00000553960 SMAD5-AS1Q9Y6J3 95 aa8.3□□□□□ -1.08
PABPN1-203ENST00000553960 MAST4O15021 2626 aa8.29□□□□□ -1.08
PABPN1-203ENST00000553960 TMEM213A2RRL7 107 aa8.29□□□□□ -1.08
PABPN1-203ENST00000553960 LINC01619G3V211 115 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms