RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 SIGLEC15Q6ZMC9 328 aa9.2□□□□□ -0.94
SHMT2-209ENST00000553949 SPAG8Q99932 426 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-209ENST00000553949 SEPSECSQ9HD40 501 aaKnown RBP9.2□□□□□ -0.94
SHMT2-209ENST00000553949 RNF24Q9Y225 148 aa9.2□□□□□ -0.94
SHMT2-209ENST00000553949 ZNF256Q9Y2P7 627 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-209ENST00000553949 IGKV3-7A0A075B6H7 116 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 TRAV5A0A0B4J249 113 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 SPP1P10451 314 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 TPT1P13693 172 aaKnown RBP9.19□□□□□ -0.94
SHMT2-209ENST00000553949 GP9P14770 177 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 M6PRP20645 277 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 C4BPBP20851 252 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 RAB2AP61019 212 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 SPATA31B1PQ5VZV4 182 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 MIR17HGQ75NE6 70 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 GBGT1Q8N5D6 347 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 STOML3Q8TAV4 291 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 GPR82Q96P67 336 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 MRPL32Q9BYC8 188 aaKnown RBP9.19□□□□□ -0.94
SHMT2-209ENST00000553949 MS4A6AQ9H2W1 248 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 FUT9Q9Y231 359 aa9.19□□□□□ -0.94
SHMT2-209ENST00000553949 DNAH3Q8TD57 4116 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 BOLA2-SMG1P6H3BVE0 249 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 MBP02144 154 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 RPL7P18124 248 aaKnown RBP9.18□□□□□ -0.94
SHMT2-209ENST00000553949 GALR1P47211 349 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 TFPI2P48307 235 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 RHOBP62745 196 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 PAFAH1B2P68402 229 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 SLC51BQ86UW2 128 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 BAP18Q8IXM2 172 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 STXBP6Q8NFX7 210 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 OR10G4Q8NGN3 311 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 OR10G9Q8NGN4 311 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 OR10G7Q8NGN6 311 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 SMAD5-AS1Q9Y6J3 95 aa9.18□□□□□ -0.94
SHMT2-209ENST00000553949 TRAV2A0A0B4J234 112 aa9.17□□□□□ -0.94
SHMT2-209ENST00000553949 OR4C46A6NHA9 309 aa9.17□□□□□ -0.94
SHMT2-209ENST00000553949 DNASE2O00115 360 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-209ENST00000553949 MRPS12O15235 138 aaKnown RBP9.17□□□□□ -0.94
SHMT2-209ENST00000553949 SEC11BP0C7V7 166 aa9.17□□□□□ -0.94
SHMT2-209ENST00000553949 TMEM41BQ5BJD5 291 aa9.17□□□□□ -0.94
SHMT2-209ENST00000553949 FAM122CQ6P4D5 195 aa9.17□□□□□ -0.94
SHMT2-209ENST00000553949 BPIFA4PQ86YQ2 179 aa9.17□□□□□ -0.94
SHMT2-209ENST00000553949 WFDC3Q8IUB2 231 aa9.17□□□□□ -0.94
SHMT2-209ENST00000553949 PRR25Q96S07 402 aa9.17□□□□□ -0.94
SHMT2-209ENST00000553949 SLC25A2Q9BXI2 301 aa9.17□□□□□ -0.94
SHMT2-209ENST00000553949 NRN1Q9NPD7 142 aa9.17□□□□□ -0.94
SHMT2-209ENST00000553949 RPRMQ9NS64 109 aa9.17□□□□□ -0.94
SHMT2-209ENST00000553949 BOLA1Q9Y3E2 137 aa9.17□□□□□ -0.94
SHMT2-209ENST00000553949 A0A1W2PPV4 95 aa9.16□□□□□ -0.94
SHMT2-209ENST00000553949 ATF4P18848 351 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-209ENST00000553949 AKR1C8PQ5T2L2 129 aa9.16□□□□□ -0.94
SHMT2-209ENST00000553949 RPP25LQ8N5L8 163 aaKnown RBP9.16□□□□□ -0.94
SHMT2-209ENST00000553949 DCANP1Q8TF63 244 aa9.16□□□□□ -0.94
SHMT2-209ENST00000553949 TMED6Q8WW62 240 aa9.16□□□□□ -0.94
SHMT2-209ENST00000553949 FAM167A-AS1Q96KT0 104 aa9.16□□□□□ -0.94
SHMT2-209ENST00000553949 C17orf77Q96MU5 243 aa9.16□□□□□ -0.94
SHMT2-209ENST00000553949 FBN3Q75N90 2809 aa9.15□□□□□ -0.94
SHMT2-209ENST00000553949 A0A087X0K7 114 aa9.15□□□□□ -0.94
SHMT2-209ENST00000553949 K7EQG2 157 aa9.15□□□□□ -0.94
SHMT2-209ENST00000553949 EIF3GO75821 320 aaKnown RBP eCLIP9.15□□□□□ -0.94
SHMT2-209ENST00000553949 IGLC2P0DOY2 106 aa9.15□□□□□ -0.94
SHMT2-209ENST00000553949 CDC34P49427 236 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-209ENST00000553949 TAS2R45P59539 299 aa9.15□□□□□ -0.94
SHMT2-209ENST00000553949 CD81P60033 236 aa9.15□□□□□ -0.94
SHMT2-209ENST00000553949 EIF5AL1Q6IS14 154 aaKnown RBP9.15□□□□□ -0.94
SHMT2-209ENST00000553949 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.15□□□□□ -0.94
SHMT2-209ENST00000553949 GTSCR1Q86UQ5 136 aa9.15□□□□□ -0.94
SHMT2-209ENST00000553949 ACTR3CQ9C0K3 210 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-209ENST00000553949 PLA2G2EQ9NZK7 142 aa9.15□□□□□ -0.94
SHMT2-209ENST00000553949 TMEM14CQ9P0S9 112 aa9.15□□□□□ -0.94
SHMT2-209ENST00000553949 UMAD1C9J7I0 102 aa9.14□□□□□ -0.95
SHMT2-209ENST00000553949 SOCS3O14543 225 aa9.14□□□□□ -0.95
SHMT2-209ENST00000553949 PRB2P02812 416 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-209ENST00000553949 SNRPCP09234 159 aaKnown RBP9.14□□□□□ -0.95
SHMT2-209ENST00000553949 CD7P09564 240 aa9.14□□□□□ -0.95
SHMT2-209ENST00000553949 PYYP10082 97 aa9.14□□□□□ -0.95
SHMT2-209ENST00000553949 MEOX2P50222 304 aa9.14□□□□□ -0.95
SHMT2-209ENST00000553949 KHDC3LQ587J8 217 aa9.14□□□□□ -0.95
SHMT2-209ENST00000553949 FAM24BQ8N5W8 94 aa9.14□□□□□ -0.95
SHMT2-209ENST00000553949 RAB24Q969Q5 203 aa9.14□□□□□ -0.95
SHMT2-209ENST00000553949 OR51M1Q9H341 326 aa9.14□□□□□ -0.95
SHMT2-209ENST00000553949 HRH4Q9H3N8 390 aa9.14□□□□□ -0.95
SHMT2-209ENST00000553949 AURKAIP1Q9NWT8 199 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-209ENST00000553949 NOTCH1P46531 2555 aa9.13□□□□□ -0.95
SHMT2-209ENST00000553949 H3BQ15 152 aa9.13□□□□□ -0.95
SHMT2-209ENST00000553949 HMGB3O15347 200 aaKnown RBP9.13□□□□□ -0.95
SHMT2-209ENST00000553949 OR7C2O60412 319 aa9.13□□□□□ -0.95
SHMT2-209ENST00000553949 HIST1H1EP10412 219 aaKnown RBP9.13□□□□□ -0.95
SHMT2-209ENST00000553949 ZNF726P1Q15940 193 aa9.13□□□□□ -0.95
SHMT2-209ENST00000553949 SAMD13Q5VXD3 122 aa9.13□□□□□ -0.95
SHMT2-209ENST00000553949 Q8N1Y9 231 aa9.13□□□□□ -0.95
SHMT2-209ENST00000553949 FXYD5Q96DB9 178 aa9.13□□□□□ -0.95
SHMT2-209ENST00000553949 ZNF503Q96F45 646 aa9.13□□□□□ -0.95
SHMT2-209ENST00000553949 PAXXQ9BUH6 204 aa9.13□□□□□ -0.95
SHMT2-209ENST00000553949 ZNF586Q9NXT0 402 aa9.13□□□□□ -0.95
SHMT2-209ENST00000553949 NBEAL1Q6ZS30 2694 aa9.13□□□□□ -0.95
SHMT2-209ENST00000553949 CTXND1A0A1B0GTU2 59 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 H3BTX0 84 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms