RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 TTC32Q5I0X7 151 aa9.82□□□□□ -0.84
NEDD1-205ENST00000553609 MZT2AQ6P582 158 aa9.82□□□□□ -0.84
NEDD1-205ENST00000553609 TMEM182Q6ZP80 229 aaPredicted RBP9.82□□□□□ -0.84
NEDD1-205ENST00000553609 GPR141Q7Z602 305 aa9.82□□□□□ -0.84
NEDD1-205ENST00000553609 OR4D5Q8NGN0 318 aa9.82□□□□□ -0.84
NEDD1-205ENST00000553609 UPK3BQ9BT76 320 aa9.82□□□□□ -0.84
NEDD1-205ENST00000553609 SLC25A39Q9BZJ4 359 aaPredicted RBP9.82□□□□□ -0.84
NEDD1-205ENST00000553609 MIXL1Q9H2W2 232 aa9.82□□□□□ -0.84
NEDD1-205ENST00000553609 SHPKQ9UHJ6 478 aa9.82□□□□□ -0.84
NEDD1-205ENST00000553609 SRRM2Q9UQ35 2752 aaKnown RBP9.82□□□□□ -0.84
NEDD1-205ENST00000553609 EPM2AB3EWF7 344 aa9.81□□□□□ -0.84
NEDD1-205ENST00000553609 TAS2R60P59551 318 aa9.81□□□□□ -0.84
NEDD1-205ENST00000553609 CLINT1Q14677 625 aa9.81□□□□□ -0.84
NEDD1-205ENST00000553609 Q6ZRN7 208 aaPredicted RBP9.81□□□□□ -0.84
NEDD1-205ENST00000553609 LINC00612Q8N6U2 182 aa9.81□□□□□ -0.84
NEDD1-205ENST00000553609 RNASE8Q8TDE3 154 aaKnown RBP9.81□□□□□ -0.84
NEDD1-205ENST00000553609 UHRF2Q96PU4 802 aa9.81□□□□□ -0.84
NEDD1-205ENST00000553609 NAA50Q9GZZ1 169 aaKnown RBP9.81□□□□□ -0.84
NEDD1-205ENST00000553609 VCX3AQ9NNX9 186 aa9.81□□□□□ -0.84
NEDD1-205ENST00000553609 A0A1W2PPQ1 181 aa9.8□□□□□ -0.84
NEDD1-205ENST00000553609 DISC1C4P0D8 188 aa9.8□□□□□ -0.84
NEDD1-205ENST00000553609 J3QL48 77 aa9.8□□□□□ -0.84
NEDD1-205ENST00000553609 PITX3O75364 302 aa9.8□□□□□ -0.84
NEDD1-205ENST00000553609 CFDP00746 253 aaPredicted RBP9.8□□□□□ -0.84
NEDD1-205ENST00000553609 ZNF182P17025 639 aaPredicted RBP9.8□□□□□ -0.84
NEDD1-205ENST00000553609 GATA2P23769 480 aaPredicted RBP9.8□□□□□ -0.84
NEDD1-205ENST00000553609 CTF1Q16619 201 aa9.8□□□□□ -0.84
NEDD1-205ENST00000553609 OR1B1Q8NGR6 318 aa9.8□□□□□ -0.84
NEDD1-205ENST00000553609 C15orf40Q8WUR7 153 aa9.8□□□□□ -0.84
NEDD1-205ENST00000553609 SMIM4Q8WVI0 70 aa9.8□□□□□ -0.84
NEDD1-205ENST00000553609 ZNF503Q96F45 646 aa9.8□□□□□ -0.84
NEDD1-205ENST00000553609 C16orf74Q96GX8 76 aa9.8□□□□□ -0.84
NEDD1-205ENST00000553609 TIMM8BQ9Y5J9 83 aaPredicted RBP9.8□□□□□ -0.84
NEDD1-205ENST00000553609 FLG2Q5D862 2391 aaPredicted RBP9.8□□□□□ -0.84
NEDD1-205ENST00000553609 TRAV26-1A0A087WT03 109 aa9.79□□□□□ -0.84
NEDD1-205ENST00000553609 XGP55808 180 aa9.79□□□□□ -0.84
NEDD1-205ENST00000553609 ESRGQ1W209 222 aa9.79□□□□□ -0.84
NEDD1-205ENST00000553609 GGNBP1Q5YKI7 109 aa9.79□□□□□ -0.84
NEDD1-205ENST00000553609 TMEM256Q8N2U0 113 aa9.79□□□□□ -0.84
NEDD1-205ENST00000553609 OR51S1Q8NGJ8 323 aa9.79□□□□□ -0.84
NEDD1-205ENST00000553609 RXFP4Q8TDU9 374 aa9.79□□□□□ -0.84
NEDD1-205ENST00000553609 AP3S1Q92572 193 aa9.79□□□□□ -0.84
NEDD1-205ENST00000553609 GPR82Q96P67 336 aa9.79□□□□□ -0.84
NEDD1-205ENST00000553609 LINC01587Q99440 93 aa9.79□□□□□ -0.84
NEDD1-205ENST00000553609 H3BRN7 92 aa9.78□□□□□ -0.84
NEDD1-205ENST00000553609 ZNF701M0R085 212 aaPredicted RBP9.78□□□□□ -0.84
NEDD1-205ENST00000553609 AKAIN1P0CW23 69 aa9.78□□□□□ -0.84
NEDD1-205ENST00000553609 INAFM2P0DMQ5 153 aa9.78□□□□□ -0.84
NEDD1-205ENST00000553609 IAPPP10997 89 aa9.78□□□□□ -0.84
NEDD1-205ENST00000553609 HOXA5P20719 270 aa9.78□□□□□ -0.84
NEDD1-205ENST00000553609 DLK1P80370 383 aa9.78□□□□□ -0.84
NEDD1-205ENST00000553609 MRPS10P82664 201 aaKnown RBP9.78□□□□□ -0.84
NEDD1-205ENST00000553609 ZNF738Q8NE65 137 aa9.78□□□□□ -0.84
NEDD1-205ENST00000553609 OR8A1Q8NGG7 326 aa9.78□□□□□ -0.84
NEDD1-205ENST00000553609 OR1S1Q8NH92 325 aa9.78□□□□□ -0.84
NEDD1-205ENST00000553609 GNPNAT1Q96EK6 184 aaPredicted RBP9.78□□□□□ -0.84
NEDD1-205ENST00000553609 PRRT1Q99946 306 aa9.78□□□□□ -0.84
NEDD1-205ENST00000553609 NOP10Q9NPE3 64 aaKnown RBP9.78□□□□□ -0.84
NEDD1-205ENST00000553609 ZNF586Q9NXT0 402 aa9.78□□□□□ -0.84
NEDD1-205ENST00000553609 KCNIP3Q9Y2W7 256 aa9.78□□□□□ -0.84
NEDD1-205ENST00000553609 MRPS16Q9Y3D3 137 aaKnown RBP9.78□□□□□ -0.84
NEDD1-205ENST00000553609 PRB4P10163 310 aaPredicted RBP9.77□□□□□ -0.85
NEDD1-205ENST00000553609 ORM2P19652 201 aa9.77□□□□□ -0.85
NEDD1-205ENST00000553609 CXCL3P19876 107 aa9.77□□□□□ -0.85
NEDD1-205ENST00000553609 M6PRP20645 277 aa9.77□□□□□ -0.85
NEDD1-205ENST00000553609 HIST1H1AQ02539 215 aaPredicted RBP9.77□□□□□ -0.85
NEDD1-205ENST00000553609 ZNF493Q6ZR52 646 aa9.77□□□□□ -0.85
NEDD1-205ENST00000553609 TMEM144Q7Z5S9 345 aa9.77□□□□□ -0.85
NEDD1-205ENST00000553609 LYPD1Q8N2G4 141 aa9.77□□□□□ -0.85
NEDD1-205ENST00000553609 BPIFCQ8NFQ6 507 aa9.77□□□□□ -0.85
NEDD1-205ENST00000553609 TMEM263Q8WUH6 116 aaKnown RBP9.77□□□□□ -0.85
NEDD1-205ENST00000553609 A0A0J9YY99 117 aa9.76□□□□□ -0.85
NEDD1-205ENST00000553609 HTN1P15515 57 aa9.76□□□□□ -0.85
NEDD1-205ENST00000553609 FUSP35637 526 aaKnown RBP eCLIP9.76□□□□□ -0.85
NEDD1-205ENST00000553609 LINC00315P59091 139 aa9.76□□□□□ -0.85
NEDD1-205ENST00000553609 RAB11AP62491 216 aa9.76□□□□□ -0.85
NEDD1-205ENST00000553609 OR5I1Q13606 314 aa9.76□□□□□ -0.85
NEDD1-205ENST00000553609 KIR3DS1Q14943 382 aa9.76□□□□□ -0.85
NEDD1-205ENST00000553609 CLVS1Q8IUQ0 354 aaPredicted RBP9.76□□□□□ -0.85
NEDD1-205ENST00000553609 OR10J6PQ8NGY7 276 aa9.76□□□□□ -0.85
NEDD1-205ENST00000553609 SHANK2-AS3Q9BTD1 123 aa9.76□□□□□ -0.85
NEDD1-205ENST00000553609 TMEM147Q9BVK8 224 aa9.76□□□□□ -0.85
NEDD1-205ENST00000553609 A0A087X0K7 114 aa9.75□□□□□ -0.85
NEDD1-205ENST00000553609 ANKRD20A5PA0PJZ0 165 aa9.75□□□□□ -0.85
NEDD1-205ENST00000553609 H3BNG1 76 aa9.75□□□□□ -0.85
NEDD1-205ENST00000553609 CTDSP2O14595 271 aa9.75□□□□□ -0.85
NEDD1-205ENST00000553609 CTDSPLO15194 276 aa9.75□□□□□ -0.85
NEDD1-205ENST00000553609 AKR1C4P17516 323 aa9.75□□□□□ -0.85
NEDD1-205ENST00000553609 SRPXP78539 464 aa9.75□□□□□ -0.85
NEDD1-205ENST00000553609 FGL1Q08830 312 aa9.75□□□□□ -0.85
NEDD1-205ENST00000553609 Q5VSD8 79 aa9.75□□□□□ -0.85
NEDD1-205ENST00000553609 RPL7P18124 248 aaKnown RBP9.74□□□□□ -0.85
NEDD1-205ENST00000553609 CDKN1BP46527 198 aa9.74□□□□□ -0.85
NEDD1-205ENST00000553609 RHOBP62745 196 aa9.74□□□□□ -0.85
NEDD1-205ENST00000553609 PSG3Q16557 428 aa9.74□□□□□ -0.85
NEDD1-205ENST00000553609 PAIP2BQ9ULR5 123 aaKnown RBP9.74□□□□□ -0.85
NEDD1-205ENST00000553609 DUXBA0A1W2PPF3 345 aa9.73□□□□□ -0.85
NEDD1-205ENST00000553609 H7BYZ3 331 aa9.73□□□□□ -0.85
NEDD1-205ENST00000553609 MRPS12O15235 138 aaKnown RBP9.73□□□□□ -0.85
NEDD1-205ENST00000553609 ACOT7LQ6ZUV0 252 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms