RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 ACY3Q96HD9 319 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 SEC22CQ9BRL7 303 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 ALKBH7Q9BT30 221 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-220ENST00000553491 CHRDL1Q9BU40 450 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 SHPKQ9UHJ6 478 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 UFC1Q9Y3C8 167 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 IGHV4-4A0A075B6R2 117 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 TRAV14DV4A0A0A6YYC5 116 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 IGHV3-66A0A0C4DH42 116 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 SMCO3A2RU48 225 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 C2orf70A6NJV1 201 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 I3L2K1 104 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 K7EIM0 57 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 L7N2F9 121 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 DNASE2O00115 360 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-220ENST00000553491 CORTO00230 105 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 CCSO14618 274 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 SYNGR2O43760 224 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 SCGB2A1O75556 95 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 CCNKO75909 580 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 TMEM50AO95807 157 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 CTSGP08311 255 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 NPY1RP25929 384 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 TNFRSF9Q07011 255 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 DHRS2Q13268 280 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 ASAH1Q13510 395 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 IAH1Q2TAA2 248 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-220ENST00000553491 TIGITQ495A1 244 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 KPRPQ5T749 579 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-220ENST00000553491 LAMTOR1Q6IAA8 161 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 ETFRF1Q6IPR1 90 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 LCN12Q6JVE5 192 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 UNQ9165/PRO28630Q6UXU0 137 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 C12orf45Q8N5I9 185 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-220ENST00000553491 OR52E5Q8NH55 327 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 DEDD2Q8WXF8 326 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 TXN2Q99757 166 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 C20orf85Q9H1P6 137 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 GPN1Q9HCN4 374 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-220ENST00000553491 NUDT15Q9NV35 164 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 PSENENQ9NZ42 101 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 CACFD1Q9UGQ2 172 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 LSM5Q9Y4Y9 91 aaKnown RBP3.51□□□□□ -1.85
ATXN3-220ENST00000553491 SMAD5-AS1Q9Y6J3 95 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 FBN3Q75N90 2809 aa3.51□□□□□ -1.85
ATXN3-220ENST00000553491 TRAV30A0A087WSZ9 112 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 DUXBA0A1W2PPF3 345 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 ZFP92A6NM28 416 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 MPTX1A8MV57 137 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 E5RGE8 158 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 H3BP45 60 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 LGALS9O00182 355 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 NDUFA4O00483 81 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 SSNA1O43805 119 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 SSSCA1O60232 199 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 IGLV1-51P01701 117 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 P0C879 139 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 NPPCP23582 126 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 OR10J1P30954 320 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 RND2P52198 227 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 S100A10P60903 97 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 RRAS2P62070 204 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-220ENST00000553491 POLR2GP62487 172 aaKnown RBP eCLIP3.5□□□□□ -1.85
ATXN3-220ENST00000553491 EGFEM1PQ0D2K5 195 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 OR2F1Q13607 317 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 DEFB114Q30KQ6 69 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 ZNF876PQ49A33 203 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 C2orf83Q53S99 150 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 NMSQ5H8A3 153 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 OR8G2PQ6IF36 304 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 GSG1LQ6UXU4 331 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 IL34Q6ZMJ4 242 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 ZNF431Q8TF32 576 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-220ENST00000553491 Q8WTZ3 238 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 GATAD1Q8WUU5 269 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 NARS2Q96I59 477 aaKnown RBP3.5□□□□□ -1.85
ATXN3-220ENST00000553491 SLC35E1Q96K37 410 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 OR10C1Q96KK4 312 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 GINS3Q9BRX5 216 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 PBDC1Q9BVG4 233 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 TECRQ9NZ01 308 aaKnown RBP3.5□□□□□ -1.85
ATXN3-220ENST00000553491 MRPL27Q9P0M9 148 aaKnown RBP3.5□□□□□ -1.85
ATXN3-220ENST00000553491 MLXQ9UH92 298 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 UBQLN2Q9UHD9 624 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 STRAPQ9Y3F4 350 aaKnown RBP3.5□□□□□ -1.85
ATXN3-220ENST00000553491 PUS1Q9Y606 427 aaKnown RBP eCLIP3.5□□□□□ -1.85
ATXN3-220ENST00000553491 U3KQ87 197 aa3.5□□□□□ -1.85
ATXN3-220ENST00000553491 TGP01266 2768 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 OR11H12B2RN74 326 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 INMT-MINDY4F8WBC2 141 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 GOSR2O14653 212 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 CLN5O75503 358 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 SIX6O95475 246 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 CFC1BP0CG36 223 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 CFC1P0CG37 223 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 RD3LP0DJH9 198 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 SLC25A4P12235 298 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 BTCP35070 178 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 PAFAH1B2P68402 229 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 AKR1C1Q04828 323 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms