RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-222	ENST00000552465	LYPD1	Q8N2G4	141 aa		11.69	□□□□□ -0.54
CACNB3-222	ENST00000552465	TMEM256	Q8N2U0	113 aa		11.69	□□□□□ -0.54
CACNB3-222	ENST00000552465	RNF182	Q8N6D2	247 aa		11.69	□□□□□ -0.54
CACNB3-222	ENST00000552465	THAP8	Q8NA92	274 aa		11.69	□□□□□ -0.54
CACNB3-222	ENST00000552465	RXFP4	Q8TDU9	374 aa		11.69	□□□□□ -0.54
CACNB3-222	ENST00000552465	C15orf40	Q8WUR7	153 aa		11.69	□□□□□ -0.54
CACNB3-222	ENST00000552465	ZNF503	Q96F45	646 aa		11.69	□□□□□ -0.54
CACNB3-222	ENST00000552465	C16orf74	Q96GX8	76 aa		11.69	□□□□□ -0.54
CACNB3-222	ENST00000552465	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.69	□□□□□ -0.54
CACNB3-222	ENST00000552465	TRAV26-1	A0A087WT03	109 aa		11.68	□□□□□ -0.54
CACNB3-222	ENST00000552465	HTN1	P15515	57 aa		11.68	□□□□□ -0.54
CACNB3-222	ENST00000552465	ZNF182	P17025	639 aa	Predicted RBP	11.68	□□□□□ -0.54
CACNB3-222	ENST00000552465	GPR82	Q96P67	336 aa		11.68	□□□□□ -0.54
CACNB3-222	ENST00000552465	VCX3A	Q9NNX9	186 aa		11.68	□□□□□ -0.54
CACNB3-222	ENST00000552465	NOP10	Q9NPE3	64 aa	Known RBP	11.68	□□□□□ -0.54
CACNB3-222	ENST00000552465	KCNIP3	Q9Y2W7	256 aa		11.68	□□□□□ -0.54
CACNB3-222	ENST00000552465	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.68	□□□□□ -0.54
CACNB3-222	ENST00000552465		A0A0B4J2A0	478 aa		11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465	DISC1	C4P0D8	188 aa		11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465	M6PR	P20645	277 aa		11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465	XG	P55808	180 aa		11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465	SSBP1	Q04837	148 aa	Known RBP	11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465	ZNF493	Q6ZR52	646 aa		11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465	LYZL2	Q7Z4W2	148 aa		11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465	TMEM144	Q7Z5S9	345 aa		11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465	ZNF738	Q8NE65	137 aa		11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465	FUNDC2	Q9BWH2	189 aa		11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465	PGPEP1	Q9NXJ5	209 aa		11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465	ZNF586	Q9NXT0	402 aa		11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465	SHPK	Q9UHJ6	478 aa		11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465	MRPS16	Q9Y3D3	137 aa	Known RBP	11.67	□□□□□ -0.54
CACNB3-222	ENST00000552465		A0A0J9YY99	117 aa		11.66	□□□□□ -0.54
CACNB3-222	ENST00000552465	ORM2	P19652	201 aa		11.66	□□□□□ -0.54
CACNB3-222	ENST00000552465	RAB11A	P62491	216 aa		11.66	□□□□□ -0.54
CACNB3-222	ENST00000552465	RHOB	P62745	196 aa		11.66	□□□□□ -0.54
CACNB3-222	ENST00000552465	FGL1	Q08830	312 aa		11.66	□□□□□ -0.54
CACNB3-222	ENST00000552465	OR10J6P	Q8NGY7	276 aa		11.66	□□□□□ -0.54
CACNB3-222	ENST00000552465		A0A087WXM4	84 aa		11.65	□□□□□ -0.54
CACNB3-222	ENST00000552465	ZNF701	M0R085	212 aa	Predicted RBP	11.65	□□□□□ -0.54
CACNB3-222	ENST00000552465	HIST1H1A	Q02539	215 aa	Predicted RBP	11.65	□□□□□ -0.54
CACNB3-222	ENST00000552465	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.65	□□□□□ -0.54
CACNB3-222	ENST00000552465		Q6ZRN7	208 aa	Predicted RBP	11.65	□□□□□ -0.54
CACNB3-222	ENST00000552465	LINC00612	Q8N6U2	182 aa		11.65	□□□□□ -0.54
CACNB3-222	ENST00000552465	OR8A1	Q8NGG7	326 aa		11.65	□□□□□ -0.54
CACNB3-222	ENST00000552465	OR1S1	Q8NH92	325 aa		11.65	□□□□□ -0.54
CACNB3-222	ENST00000552465	RNASE8	Q8TDE3	154 aa	Known RBP	11.65	□□□□□ -0.54
CACNB3-222	ENST00000552465	AP3S1	Q92572	193 aa		11.65	□□□□□ -0.54
CACNB3-222	ENST00000552465	TMEM147	Q9BVK8	224 aa		11.65	□□□□□ -0.54
CACNB3-222	ENST00000552465	PPP1R14D	Q9NXH3	145 aa		11.65	□□□□□ -0.54
CACNB3-222	ENST00000552465	HOXA5	P20719	270 aa		11.64	□□□□□ -0.55
CACNB3-222	ENST00000552465	GATA2	P23769	480 aa	Predicted RBP	11.64	□□□□□ -0.55
CACNB3-222	ENST00000552465	S100A7	P31151	101 aa		11.64	□□□□□ -0.55
CACNB3-222	ENST00000552465	FUS	P35637	526 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
CACNB3-222	ENST00000552465	LINC00315	P59091	139 aa		11.64	□□□□□ -0.55
CACNB3-222	ENST00000552465		Q5VSD8	79 aa		11.64	□□□□□ -0.55
CACNB3-222	ENST00000552465	BPIFC	Q8NFQ6	507 aa		11.64	□□□□□ -0.55
CACNB3-222	ENST00000552465	TMEM263	Q8WUH6	116 aa	Known RBP	11.64	□□□□□ -0.55
CACNB3-222	ENST00000552465	PTTG2	Q9NZH5	202 aa		11.64	□□□□□ -0.55
CACNB3-222	ENST00000552465	PAIP2B	Q9ULR5	123 aa	Known RBP	11.64	□□□□□ -0.55
CACNB3-222	ENST00000552465		H3BNG1	76 aa		11.63	□□□□□ -0.55
CACNB3-222	ENST00000552465	AKR1C4	P17516	323 aa		11.63	□□□□□ -0.55
CACNB3-222	ENST00000552465	OR51S1	Q8NGJ8	323 aa		11.63	□□□□□ -0.55
CACNB3-222	ENST00000552465	FRZB	Q92765	325 aa		11.63	□□□□□ -0.55
CACNB3-222	ENST00000552465	PRRT1	Q99946	306 aa		11.63	□□□□□ -0.55
CACNB3-222	ENST00000552465	PITX3	O75364	302 aa		11.62	□□□□□ -0.55
CACNB3-222	ENST00000552465	ADAP1	O75689	374 aa		11.62	□□□□□ -0.55
CACNB3-222	ENST00000552465	AKAIN1	P0CW23	69 aa		11.62	□□□□□ -0.55
CACNB3-222	ENST00000552465	IAPP	P10997	89 aa		11.62	□□□□□ -0.55
CACNB3-222	ENST00000552465	CXCL3	P19876	107 aa		11.62	□□□□□ -0.55
CACNB3-222	ENST00000552465	CDKN1B	P46527	198 aa		11.62	□□□□□ -0.55
CACNB3-222	ENST00000552465	MRPS10	P82664	201 aa	Known RBP	11.62	□□□□□ -0.55
CACNB3-222	ENST00000552465	PRSS46	E5RG02	174 aa		11.61	□□□□□ -0.55
CACNB3-222	ENST00000552465		H3BRN7	92 aa		11.61	□□□□□ -0.55
CACNB3-222	ENST00000552465		H7BYZ3	331 aa		11.61	□□□□□ -0.55
CACNB3-222	ENST00000552465	PSG3	Q16557	428 aa		11.61	□□□□□ -0.55
CACNB3-222	ENST00000552465	CDPF1	Q6NVV7	123 aa		11.61	□□□□□ -0.55
CACNB3-222	ENST00000552465	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.61	□□□□□ -0.55
CACNB3-222	ENST00000552465	SMIM4	Q8WVI0	70 aa		11.61	□□□□□ -0.55
CACNB3-222	ENST00000552465	SHANK2-AS3	Q9BTD1	123 aa		11.61	□□□□□ -0.55
CACNB3-222	ENST00000552465	MIXL1	Q9H2W2	232 aa		11.61	□□□□□ -0.55
CACNB3-222	ENST00000552465	GAGE12B	A1L429	117 aa		11.6	□□□□□ -0.55
CACNB3-222	ENST00000552465	EREG	O14944	169 aa		11.6	□□□□□ -0.55
CACNB3-222	ENST00000552465	GAGE7	O76087	117 aa		11.6	□□□□□ -0.55
CACNB3-222	ENST00000552465	GAGE12F	P0CL80	117 aa		11.6	□□□□□ -0.55
CACNB3-222	ENST00000552465	GAGE12G	P0CL81	117 aa		11.6	□□□□□ -0.55
CACNB3-222	ENST00000552465	GAGE12I	P0CL82	117 aa		11.6	□□□□□ -0.55
CACNB3-222	ENST00000552465	PRB4	P10163	310 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNB3-222	ENST00000552465	RPL7	P18124	248 aa	Known RBP	11.6	□□□□□ -0.55
CACNB3-222	ENST00000552465	SRPX	P78539	464 aa		11.6	□□□□□ -0.55
CACNB3-222	ENST00000552465	SCGB3A2	Q96PL1	93 aa		11.6	□□□□□ -0.55
CACNB3-222	ENST00000552465	RLN2	P04090	185 aa		11.59	□□□□□ -0.55
CACNB3-222	ENST00000552465	CCDC28A	Q8IWP9	274 aa		11.59	□□□□□ -0.55
CACNB3-222	ENST00000552465	C20orf144	Q9BQM9	153 aa		11.59	□□□□□ -0.55
CACNB3-222	ENST00000552465		A0A087X0K7	114 aa		11.58	□□□□□ -0.56
CACNB3-222	ENST00000552465	MED6	O75586	246 aa		11.58	□□□□□ -0.56
CACNB3-222	ENST00000552465	ANXA3	P12429	323 aa		11.58	□□□□□ -0.56
CACNB3-222	ENST00000552465	KRTAP10-1	P60331	282 aa		11.58	□□□□□ -0.56
CACNB3-222	ENST00000552465	ERVFC1-1	P60608	527 aa		11.58	□□□□□ -0.56
CACNB3-222	ENST00000552465	RAP2B	P61225	183 aa		11.58	□□□□□ -0.56
CACNB3-222	ENST00000552465	RPP30	P78346	268 aa	Known RBP	11.58	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms