RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 LINC00052Q96N35 136 aa13.63□□□□□ -0.23
PRPF40B-216ENST00000552301 RSG1Q9BU20 258 aa13.63□□□□□ -0.23
PRPF40B-216ENST00000552301 MBD2Q9UBB5 411 aa13.63□□□□□ -0.23
PRPF40B-216ENST00000552301 ELOA3CA0A087WX78 387 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-216ENST00000552301 MPDU1O75352 247 aa13.62□□□□□ -0.23
PRPF40B-216ENST00000552301 CXCL3P19876 107 aa13.62□□□□□ -0.23
PRPF40B-216ENST00000552301 FCN2Q15485 313 aa13.62□□□□□ -0.23
PRPF40B-216ENST00000552301 MIC13Q5XKP0 118 aa13.62□□□□□ -0.23
PRPF40B-216ENST00000552301 THAP6Q8TBB0 222 aa13.62□□□□□ -0.23
PRPF40B-216ENST00000552301 C16orf92Q96LL3 132 aa13.62□□□□□ -0.23
PRPF40B-216ENST00000552301 TP53TG1Q9Y2A0 90 aa13.62□□□□□ -0.23
PRPF40B-216ENST00000552301 ISLRO14498 428 aa13.61□□□□□ -0.23
PRPF40B-216ENST00000552301 SPRY2O43597 315 aa13.61□□□□□ -0.23
PRPF40B-216ENST00000552301 CA1P00915 261 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-216ENST00000552301 B2MP61769 119 aa13.61□□□□□ -0.23
PRPF40B-216ENST00000552301 FGL1Q08830 312 aa13.61□□□□□ -0.23
PRPF40B-216ENST00000552301 OPCMLQ14982 345 aa13.61□□□□□ -0.23
PRPF40B-216ENST00000552301 C10orf113Q5VZT2 155 aa13.61□□□□□ -0.23
PRPF40B-216ENST00000552301 LINC00305Q7Z4B0 112 aa13.61□□□□□ -0.23
PRPF40B-216ENST00000552301 OR1L4Q8NGR5 311 aa13.61□□□□□ -0.23
PRPF40B-216ENST00000552301 PFDN5Q99471 154 aa13.61□□□□□ -0.23
PRPF40B-216ENST00000552301 OVOL2Q9BRP0 275 aa13.61□□□□□ -0.23
PRPF40B-216ENST00000552301 RNF126Q9BV68 326 aa13.61□□□□□ -0.23
PRPF40B-216ENST00000552301 TENM3Q9P273 2699 aa13.6□□□□□ -0.23
PRPF40B-216ENST00000552301 RPL29P47914 159 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-216ENST00000552301 MORN3Q6PF18 240 aaPredicted RBP13.6□□□□□ -0.23
PRPF40B-216ENST00000552301 PATE2Q6UY27 113 aa13.6□□□□□ -0.23
PRPF40B-216ENST00000552301 TRPT1Q86TN4 253 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-216ENST00000552301 ZNF709Q8N972 641 aa13.6□□□□□ -0.23
PRPF40B-216ENST00000552301 OR11H7Q8NGC8 314 aa13.6□□□□□ -0.23
PRPF40B-216ENST00000552301 KCNIP2Q9NS61 270 aa13.6□□□□□ -0.23
PRPF40B-216ENST00000552301 SLC39A9Q9NUM3 307 aa13.6□□□□□ -0.23
PRPF40B-216ENST00000552301 HSPB11Q9Y547 144 aa13.6□□□□□ -0.23
PRPF40B-216ENST00000552301 PXMP4Q9Y6I8 212 aa13.6□□□□□ -0.23
PRPF40B-216ENST00000552301 AGRNO00468 2067 aa13.59□□□□□ -0.23
PRPF40B-216ENST00000552301 SOCS3O14543 225 aa13.59□□□□□ -0.23
PRPF40B-216ENST00000552301 SPP1P10451 314 aa13.59□□□□□ -0.23
PRPF40B-216ENST00000552301 RPL12P30050 165 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-216ENST00000552301 PRR20EP86478 221 aa13.59□□□□□ -0.23
PRPF40B-216ENST00000552301 PRR20CP86479 221 aa13.59□□□□□ -0.23
PRPF40B-216ENST00000552301 PRR20DP86480 221 aa13.59□□□□□ -0.23
PRPF40B-216ENST00000552301 PRR20BP86481 221 aa13.59□□□□□ -0.23
PRPF40B-216ENST00000552301 PRR20AP86496 221 aa13.59□□□□□ -0.23
PRPF40B-216ENST00000552301 OXA1LQ15070 435 aa13.59□□□□□ -0.23
PRPF40B-216ENST00000552301 NPCDR1Q9BY65 106 aa13.59□□□□□ -0.23
PRPF40B-216ENST00000552301 DNAJC4Q9NNZ3 241 aa13.59□□□□□ -0.23
PRPF40B-216ENST00000552301 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.58□□□□□ -0.24
PRPF40B-216ENST00000552301 LRRC20Q8TCA0 184 aa13.58□□□□□ -0.24
PRPF40B-216ENST00000552301 CHAC2Q8WUX2 184 aa13.58□□□□□ -0.24
PRPF40B-216ENST00000552301 ASB13Q8WXK3 278 aa13.58□□□□□ -0.24
PRPF40B-216ENST00000552301 RNF183Q96D59 192 aa13.58□□□□□ -0.24
PRPF40B-216ENST00000552301 ATP5SQ99766 215 aa13.58□□□□□ -0.24
PRPF40B-216ENST00000552301 EDA2RQ9HAV5 297 aa13.58□□□□□ -0.24
PRPF40B-216ENST00000552301 RPRMQ9NS64 109 aa13.58□□□□□ -0.24
PRPF40B-216ENST00000552301 GIPP09681 153 aaPredicted RBP13.57□□□□□ -0.24
PRPF40B-216ENST00000552301 NUTF2P61970 127 aaKnown RBP13.57□□□□□ -0.24
PRPF40B-216ENST00000552301 TMEM41BQ5BJD5 291 aa13.57□□□□□ -0.24
PRPF40B-216ENST00000552301 EBLN2Q6P2I7 272 aa13.57□□□□□ -0.24
PRPF40B-216ENST00000552301 FOXI2Q6ZQN5 318 aa13.57□□□□□ -0.24
PRPF40B-216ENST00000552301 BPIFA4PQ86YQ2 179 aa13.57□□□□□ -0.24
PRPF40B-216ENST00000552301 MUC7Q8TAX7 377 aa13.57□□□□□ -0.24
PRPF40B-216ENST00000552301 GATAD1Q8WUU5 269 aa13.57□□□□□ -0.24
PRPF40B-216ENST00000552301 TMEM37Q8WXS4 190 aa13.57□□□□□ -0.24
PRPF40B-216ENST00000552301 SMIM3Q9BZL3 60 aa13.57□□□□□ -0.24
PRPF40B-216ENST00000552301 NBEAL2Q6ZNJ1 2754 aa13.56□□□□□ -0.24
PRPF40B-216ENST00000552301 C17orf112F2Z3M2 114 aa13.56□□□□□ -0.24
PRPF40B-216ENST00000552301 IFNA5P01569 189 aa13.56□□□□□ -0.24
PRPF40B-216ENST00000552301 HLA-DRB4P13762 266 aa13.56□□□□□ -0.24
PRPF40B-216ENST00000552301 SCGB1C1Q8TD33 95 aa13.56□□□□□ -0.24
PRPF40B-216ENST00000552301 WDR61Q9GZS3 305 aaKnown RBP13.56□□□□□ -0.24
PRPF40B-216ENST00000552301 HLA-DRB4X5D2U9 266 aa13.56□□□□□ -0.24
PRPF40B-216ENST00000552301 RYR3Q15413 4870 aa13.55□□□□□ -0.24
PRPF40B-216ENST00000552301 A0A087X0K7 114 aa13.55□□□□□ -0.24
PRPF40B-216ENST00000552301 H3BMM0 161 aa13.55□□□□□ -0.24
PRPF40B-216ENST00000552301 C3orf84H3BNL1 204 aa13.55□□□□□ -0.24
PRPF40B-216ENST00000552301 LYL1P12980 280 aa13.55□□□□□ -0.24
PRPF40B-216ENST00000552301 SPATA31B1PQ5VZV4 182 aa13.55□□□□□ -0.24
PRPF40B-216ENST00000552301 SAV1Q9H4B6 383 aaPredicted RBP13.55□□□□□ -0.24
PRPF40B-216ENST00000552301 LCN15Q6UWW0 184 aa13.54□□□□□ -0.24
PRPF40B-216ENST00000552301 C1QTNF4Q9BXJ3 329 aa13.54□□□□□ -0.24
PRPF40B-216ENST00000552301 IGKV3-20P01619 116 aa13.53□□□□□ -0.24
PRPF40B-216ENST00000552301 CXCL2P19875 107 aa13.53□□□□□ -0.24
PRPF40B-216ENST00000552301 DEFB1P60022 68 aa13.53□□□□□ -0.24
PRPF40B-216ENST00000552301 ZNF738Q8NE65 137 aa13.53□□□□□ -0.24
PRPF40B-216ENST00000552301 OR4B1Q8NGF8 309 aa13.53□□□□□ -0.24
PRPF40B-216ENST00000552301 IL17DQ8TAD2 202 aa13.53□□□□□ -0.24
PRPF40B-216ENST00000552301 C20orf173Q96LM9 149 aa13.53□□□□□ -0.24
PRPF40B-216ENST00000552301 RARRES2Q99969 163 aa13.53□□□□□ -0.24
PRPF40B-216ENST00000552301 C4BPBP20851 252 aa13.52□□□□□ -0.25
PRPF40B-216ENST00000552301 GDF5OSQ5U4N7 250 aa13.52□□□□□ -0.25
PRPF40B-216ENST00000552301 MORN5Q5VZ52 161 aa13.52□□□□□ -0.25
PRPF40B-216ENST00000552301 IGFL4Q6B9Z1 124 aa13.52□□□□□ -0.25
PRPF40B-216ENST00000552301 OR11H2Q8NH07 326 aa13.52□□□□□ -0.25
PRPF40B-216ENST00000552301 C17orf77Q96MU5 243 aa13.52□□□□□ -0.25
PRPF40B-216ENST00000552301 SLC50A1Q9BRV3 221 aa13.52□□□□□ -0.25
PRPF40B-216ENST00000552301 TRAV8-2A0A0B4J237 113 aa13.51□□□□□ -0.25
PRPF40B-216ENST00000552301 F6UB75 175 aa13.51□□□□□ -0.25
PRPF40B-216ENST00000552301 MRPS12O15235 138 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-216ENST00000552301 FAM78BQ5VT40 261 aa13.51□□□□□ -0.25
PRPF40B-216ENST00000552301 RNF182Q8N6D2 247 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms