RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 GGNBP1Q5YKI7 109 aa11.34□□□□□ -0.59
RAB5C-209ENST00000552162 LYZL2Q7Z4W2 148 aa11.34□□□□□ -0.59
RAB5C-209ENST00000552162 TMEM256Q8N2U0 113 aa11.34□□□□□ -0.59
RAB5C-209ENST00000552162 OR4D5Q8NGN0 318 aa11.34□□□□□ -0.59
RAB5C-209ENST00000552162 OR1B1Q8NGR6 318 aa11.34□□□□□ -0.59
RAB5C-209ENST00000552162 C16orf74Q96GX8 76 aa11.34□□□□□ -0.59
RAB5C-209ENST00000552162 GPR82Q96P67 336 aa11.34□□□□□ -0.59
RAB5C-209ENST00000552162 LINC01587Q99440 93 aa11.34□□□□□ -0.59
RAB5C-209ENST00000552162 SLC25A39Q9BZJ4 359 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-209ENST00000552162 AKAIN1P0CW23 69 aa11.33□□□□□ -0.6
RAB5C-209ENST00000552162 HTN1P15515 57 aa11.33□□□□□ -0.6
RAB5C-209ENST00000552162 RAB11AP62491 216 aa11.33□□□□□ -0.6
RAB5C-209ENST00000552162 ZNF738Q8NE65 137 aa11.33□□□□□ -0.6
RAB5C-209ENST00000552162 OR1S1Q8NH92 325 aa11.33□□□□□ -0.6
RAB5C-209ENST00000552162 UHRF2Q96PU4 802 aa11.33□□□□□ -0.6
RAB5C-209ENST00000552162 PRRT1Q99946 306 aa11.33□□□□□ -0.6
RAB5C-209ENST00000552162 PAIP2BQ9ULR5 123 aaKnown RBP11.33□□□□□ -0.6
RAB5C-209ENST00000552162 TIMM8BQ9Y5J9 83 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-209ENST00000552162 AKR1C4P17516 323 aa11.32□□□□□ -0.6
RAB5C-209ENST00000552162 ORM2P19652 201 aa11.32□□□□□ -0.6
RAB5C-209ENST00000552162 TAS2R60P59551 318 aa11.32□□□□□ -0.6
RAB5C-209ENST00000552162 MRPS10P82664 201 aaKnown RBP11.32□□□□□ -0.6
RAB5C-209ENST00000552162 FGL1Q08830 312 aa11.32□□□□□ -0.6
RAB5C-209ENST00000552162 OR51S1Q8NGJ8 323 aa11.32□□□□□ -0.6
RAB5C-209ENST00000552162 SMIM4Q8WVI0 70 aa11.32□□□□□ -0.6
RAB5C-209ENST00000552162 GNPNAT1Q96EK6 184 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-209ENST00000552162 TRAV26-1A0A087WT03 109 aa11.31□□□□□ -0.6
RAB5C-209ENST00000552162 A0A1W2PPQ1 181 aa11.31□□□□□ -0.6
RAB5C-209ENST00000552162 IAPPP10997 89 aa11.31□□□□□ -0.6
RAB5C-209ENST00000552162 GATA2P23769 480 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-209ENST00000552162 RHOBP62745 196 aa11.31□□□□□ -0.6
RAB5C-209ENST00000552162 DLK1P80370 383 aa11.31□□□□□ -0.6
RAB5C-209ENST00000552162 HIST1H1AQ02539 215 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-209ENST00000552162 OR5I1Q13606 314 aa11.31□□□□□ -0.6
RAB5C-209ENST00000552162 TMEM144Q7Z5S9 345 aa11.31□□□□□ -0.6
RAB5C-209ENST00000552162 BPIFCQ8NFQ6 507 aa11.31□□□□□ -0.6
RAB5C-209ENST00000552162 UPK3BQ9BT76 320 aa11.31□□□□□ -0.6
RAB5C-209ENST00000552162 TMEM147Q9BVK8 224 aa11.31□□□□□ -0.6
RAB5C-209ENST00000552162 NOP10Q9NPE3 64 aaKnown RBP11.31□□□□□ -0.6
RAB5C-209ENST00000552162 S100A7P31151 101 aa11.3□□□□□ -0.6
RAB5C-209ENST00000552162 TMEM182Q6ZP80 229 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-209ENST00000552162 CLVS1Q8IUQ0 354 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-209ENST00000552162 OR10J6PQ8NGY7 276 aa11.3□□□□□ -0.6
RAB5C-209ENST00000552162 RNASE8Q8TDE3 154 aaKnown RBP11.3□□□□□ -0.6
RAB5C-209ENST00000552162 RXFP4Q8TDU9 374 aa11.3□□□□□ -0.6
RAB5C-209ENST00000552162 TMEM263Q8WUH6 116 aaKnown RBP11.3□□□□□ -0.6
RAB5C-209ENST00000552162 ZNF503Q96F45 646 aa11.3□□□□□ -0.6
RAB5C-209ENST00000552162 MIXL1Q9H2W2 232 aa11.3□□□□□ -0.6
RAB5C-209ENST00000552162 PPP1R14DQ9NXH3 145 aa11.3□□□□□ -0.6
RAB5C-209ENST00000552162 A0A0J9YY99 117 aa11.29□□□□□ -0.6
RAB5C-209ENST00000552162 INAFM2P0DMQ5 153 aa11.29□□□□□ -0.6
RAB5C-209ENST00000552162 M6PRP20645 277 aa11.29□□□□□ -0.6
RAB5C-209ENST00000552162 SRPXP78539 464 aa11.29□□□□□ -0.6
RAB5C-209ENST00000552162 ZNF493Q6ZR52 646 aa11.29□□□□□ -0.6
RAB5C-209ENST00000552162 OR8A1Q8NGG7 326 aa11.29□□□□□ -0.6
RAB5C-209ENST00000552162 NAA50Q9GZZ1 169 aaKnown RBP11.29□□□□□ -0.6
RAB5C-209ENST00000552162 ZNF586Q9NXT0 402 aa11.29□□□□□ -0.6
RAB5C-209ENST00000552162 PRSS46E5RG02 174 aa11.28□□□□□ -0.6
RAB5C-209ENST00000552162 H3BRN7 92 aa11.28□□□□□ -0.6
RAB5C-209ENST00000552162 ZNF701M0R085 212 aaPredicted RBP11.28□□□□□ -0.6
RAB5C-209ENST00000552162 RGS5O15539 181 aa11.28□□□□□ -0.6
RAB5C-209ENST00000552162 PITX3O75364 302 aa11.28□□□□□ -0.6
RAB5C-209ENST00000552162 ANXA3P12429 323 aa11.28□□□□□ -0.6
RAB5C-209ENST00000552162 CTF1Q16619 201 aa11.28□□□□□ -0.6
RAB5C-209ENST00000552162 ESRGQ1W209 222 aa11.28□□□□□ -0.6
RAB5C-209ENST00000552162 SCGB3A2Q96PL1 93 aa11.28□□□□□ -0.6
RAB5C-209ENST00000552162 SCP2D1Q9UJQ7 156 aa11.28□□□□□ -0.6
RAB5C-209ENST00000552162 MRPS16Q9Y3D3 137 aaKnown RBP11.28□□□□□ -0.6
RAB5C-209ENST00000552162 ADAP1O75689 374 aa11.27□□□□□ -0.61
RAB5C-209ENST00000552162 PRB4P10163 310 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-209ENST00000552162 CXCL3P19876 107 aa11.27□□□□□ -0.61
RAB5C-209ENST00000552162 CDKN1BP46527 198 aa11.27□□□□□ -0.61
RAB5C-209ENST00000552162 AKR1C1Q04828 323 aa11.27□□□□□ -0.61
RAB5C-209ENST00000552162 RPL7P18124 248 aaKnown RBP11.26□□□□□ -0.61
RAB5C-209ENST00000552162 HOXA5P20719 270 aa11.26□□□□□ -0.61
RAB5C-209ENST00000552162 LINC00315P59091 139 aa11.26□□□□□ -0.61
RAB5C-209ENST00000552162 RPP30P78346 268 aaKnown RBP11.26□□□□□ -0.61
RAB5C-209ENST00000552162 LINC00612Q8N6U2 182 aa11.26□□□□□ -0.61
RAB5C-209ENST00000552162 SHANK2-AS3Q9BTD1 123 aa11.26□□□□□ -0.61
RAB5C-209ENST00000552162 VPS13BQ7Z7G8 4022 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 PIGBOS1A0A0B4J2F0 54 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 DUXBA0A1W2PPF3 345 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 ANKRD20A5PA0PJZ0 165 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 H7BYZ3 331 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 CTDSP2O14595 271 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 CTDSPLO15194 276 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 MED6O75586 246 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 RAP2BP61225 183 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 IL18Q14116 193 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 PSG3Q16557 428 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 Q6ZRN7 208 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-209ENST00000552162 ACOT7LQ6ZUV0 252 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 LYPD1Q8N2G4 141 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 CIB3Q96Q77 187 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-209ENST00000552162 MCUBQ9NWR8 336 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 PTTG2Q9NZH5 202 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 HIGD1AQ9Y241 93 aa11.25□□□□□ -0.61
RAB5C-209ENST00000552162 MYCBP2O75592 4640 aa11.24□□□□□ -0.61
RAB5C-209ENST00000552162 A0A087X0K7 114 aa11.24□□□□□ -0.61
RAB5C-209ENST00000552162 GAGE12BA1L429 117 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms