RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 CEBPZOSA8MTT3 80 aa9.63□□□□□ -0.87
VPS29-209ENST00000551655 PSCAO43653 123 aa9.63□□□□□ -0.87
VPS29-209ENST00000551655 C1QBP02746 253 aa9.63□□□□□ -0.87
VPS29-209ENST00000551655 PGAM2P15259 253 aa9.63□□□□□ -0.87
VPS29-209ENST00000551655 GALR1P47211 349 aa9.63□□□□□ -0.87
VPS29-209ENST00000551655 KLF9Q13886 244 aaPredicted RBP9.63□□□□□ -0.87
VPS29-209ENST00000551655 SAMD13Q5VXD3 122 aa9.63□□□□□ -0.87
VPS29-209ENST00000551655 RNASE11Q8TAA1 199 aaKnown RBP9.63□□□□□ -0.87
VPS29-209ENST00000551655 PPP1R14DQ9NXH3 145 aa9.63□□□□□ -0.87
VPS29-209ENST00000551655 ICOSQ9Y6W8 199 aa9.63□□□□□ -0.87
VPS29-209ENST00000551655 SNURFLB1AK76 121 aa9.62□□□□□ -0.87
VPS29-209ENST00000551655 MT1HL1P0DM35 61 aa9.62□□□□□ -0.87
VPS29-209ENST00000551655 HNRNPA3P51991 378 aaKnown RBP9.62□□□□□ -0.87
VPS29-209ENST00000551655 LINC01620Q4KN68 170 aa9.62□□□□□ -0.87
VPS29-209ENST00000551655 OR8A1Q8NGG7 326 aa9.62□□□□□ -0.87
VPS29-209ENST00000551655 RRNAD1Q96FB5 475 aaKnown RBP9.62□□□□□ -0.87
VPS29-209ENST00000551655 C3orf85A0A1B0GTC6 90 aa9.61□□□□□ -0.87
VPS29-209ENST00000551655 H7BYZ3 331 aa9.61□□□□□ -0.87
VPS29-209ENST00000551655 OR5AC1P0C628 307 aa9.61□□□□□ -0.87
VPS29-209ENST00000551655 UCP3P55916 312 aa9.61□□□□□ -0.87
VPS29-209ENST00000551655 PIGPP57054 158 aa9.61□□□□□ -0.87
VPS29-209ENST00000551655 AARDQ4LEZ3 155 aa9.61□□□□□ -0.87
VPS29-209ENST00000551655 NMSQ5H8A3 153 aa9.61□□□□□ -0.87
VPS29-209ENST00000551655 TRGV2A0A075B6R0 118 aa9.6□□□□□ -0.87
VPS29-209ENST00000551655 PAX4O43316 350 aa9.6□□□□□ -0.87
VPS29-209ENST00000551655 IGHV3-53P01767 116 aa9.6□□□□□ -0.87
VPS29-209ENST00000551655 EVI2AP22794 236 aa9.6□□□□□ -0.87
VPS29-209ENST00000551655 CDKN1BP46527 198 aa9.6□□□□□ -0.87
VPS29-209ENST00000551655 SCAND1P57086 179 aa9.6□□□□□ -0.87
VPS29-209ENST00000551655 RND3P61587 244 aa9.6□□□□□ -0.87
VPS29-209ENST00000551655 WFDC2Q14508 124 aa9.6□□□□□ -0.87
VPS29-209ENST00000551655 CCDC28AQ8IWP9 274 aa9.6□□□□□ -0.87
VPS29-209ENST00000551655 OR52E5Q8NH55 327 aa9.6□□□□□ -0.87
VPS29-209ENST00000551655 CACNG5Q9UF02 275 aa9.6□□□□□ -0.87
VPS29-209ENST00000551655 SNRPGP15A8MWD9 76 aa9.59□□□□□ -0.87
VPS29-209ENST00000551655 J3KRW8 73 aa9.59□□□□□ -0.87
VPS29-209ENST00000551655 ATG12O94817 140 aa9.59□□□□□ -0.87
VPS29-209ENST00000551655 CRYGDP07320 174 aa9.59□□□□□ -0.87
VPS29-209ENST00000551655 MEF2DQ14814 521 aa9.59□□□□□ -0.87
VPS29-209ENST00000551655 GFI1BQ5VTD9 330 aa9.59□□□□□ -0.87
VPS29-209ENST00000551655 LHFPL5Q8TAF8 219 aa9.59□□□□□ -0.87
VPS29-209ENST00000551655 KRTAP9-2Q9BYQ4 174 aa9.59□□□□□ -0.87
VPS29-209ENST00000551655 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.59□□□□□ -0.87
VPS29-209ENST00000551655 IGKV1OR2-108A0A075B7D4 117 aa9.58□□□□□ -0.88
VPS29-209ENST00000551655 ZNF324O75467 553 aaPredicted RBP9.58□□□□□ -0.88
VPS29-209ENST00000551655 GATA2P23769 480 aaPredicted RBP9.57□□□□□ -0.88
VPS29-209ENST00000551655 RCVRNP35243 200 aa9.57□□□□□ -0.88
VPS29-209ENST00000551655 PSG3Q16557 428 aa9.57□□□□□ -0.88
VPS29-209ENST00000551655 OR1B1Q8NGR6 318 aa9.57□□□□□ -0.88
VPS29-209ENST00000551655 Q9HAA7 133 aa9.57□□□□□ -0.88
VPS29-209ENST00000551655 FUT9Q9Y231 359 aa9.57□□□□□ -0.88
VPS29-209ENST00000551655 TRGV1A0A0A0MS02 117 aa9.56□□□□□ -0.88
VPS29-209ENST00000551655 PRAF2O60831 178 aa9.56□□□□□ -0.88
VPS29-209ENST00000551655 CXCL3P19876 107 aa9.56□□□□□ -0.88
VPS29-209ENST00000551655 PRSS3P35030 304 aa9.56□□□□□ -0.88
VPS29-209ENST00000551655 AQP4P55087 323 aa9.56□□□□□ -0.88
VPS29-209ENST00000551655 DAZ2Q13117 558 aaKnown RBP9.56□□□□□ -0.88
VPS29-209ENST00000551655 TMEM182Q6ZP80 229 aaPredicted RBP9.56□□□□□ -0.88
VPS29-209ENST00000551655 S100A16Q96FQ6 103 aaKnown RBP9.56□□□□□ -0.88
VPS29-209ENST00000551655 SLC35E1Q96K37 410 aa9.56□□□□□ -0.88
VPS29-209ENST00000551655 C8orf49Q96NF6 230 aa9.56□□□□□ -0.88
VPS29-209ENST00000551655 GSN-AS1Q9NRJ2 163 aa9.56□□□□□ -0.88
VPS29-209ENST00000551655 SSR3Q9UNL2 185 aa9.56□□□□□ -0.88
VPS29-209ENST00000551655 RCL1Q9Y2P8 373 aaKnown RBP9.56□□□□□ -0.88
VPS29-209ENST00000551655 IGLV2-8P01709 118 aa9.55□□□□□ -0.88
VPS29-209ENST00000551655 ORM2P19652 201 aa9.55□□□□□ -0.88
VPS29-209ENST00000551655 GPX8Q8TED1 209 aa9.55□□□□□ -0.88
VPS29-209ENST00000551655 DAZAP1Q96EP5 407 aaKnown RBP9.55□□□□□ -0.88
VPS29-209ENST00000551655 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.54□□□□□ -0.88
VPS29-209ENST00000551655 TRAV12-3A0A0B4J271 114 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 GABARAPH6UMI1 98 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 LECT2O14960 151 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 RS1O15537 224 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 GABARAPO95166 117 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 FABP1P07148 127 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 CRYBA4P53673 196 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 NEGR1Q7Z3B1 354 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 CCDC190Q86UF4 302 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 LGI3Q8N145 548 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 OR4D5Q8NGN0 318 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 CIRBP-AS1Q8TBR5 109 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 RPUSD4Q96CM3 377 aaKnown RBP9.54□□□□□ -0.88
VPS29-209ENST00000551655 ZNF486Q96H40 463 aaPredicted RBP9.54□□□□□ -0.88
VPS29-209ENST00000551655 TRGV9Q99603 122 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 C20orf144Q9BQM9 153 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 COPZ2Q9P299 210 aa9.54□□□□□ -0.88
VPS29-209ENST00000551655 LORP23490 312 aaPredicted RBP9.53□□□□□ -0.88
VPS29-209ENST00000551655 ZNF415Q09FC8 603 aa9.53□□□□□ -0.88
VPS29-209ENST00000551655 MRPL23Q16540 153 aaKnown RBP9.53□□□□□ -0.88
VPS29-209ENST00000551655 NOXA1Q86UR1 476 aa9.53□□□□□ -0.88
VPS29-209ENST00000551655 LHFPL1Q86WI0 220 aa9.53□□□□□ -0.88
VPS29-209ENST00000551655 FAM219AQ8IW50 185 aa9.53□□□□□ -0.88
VPS29-209ENST00000551655 SELENOHQ8IZQ5 122 aaKnown RBP9.53□□□□□ -0.88
VPS29-209ENST00000551655 C11orf72Q8NBR9 251 aa9.53□□□□□ -0.88
VPS29-209ENST00000551655 PRO0255Q9UI72 69 aa9.53□□□□□ -0.88
VPS29-209ENST00000551655 KLF12Q9Y4X4 402 aa9.53□□□□□ -0.88
VPS29-209ENST00000551655 LOC100506127A0A0U1RQW1 187 aa9.52□□□□□ -0.89
VPS29-209ENST00000551655 PRAC2D3DTV9 90 aa9.52□□□□□ -0.89
VPS29-209ENST00000551655 K7EP13 123 aa9.52□□□□□ -0.89
VPS29-209ENST00000551655 CCNKO75909 580 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms