RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 TRAV5A0A0B4J249 113 aa13.99□□□□□ -0.17
CTDSP2-207ENST00000551594 HMSDA8MTL9 139 aa13.99□□□□□ -0.17
CTDSP2-207ENST00000551594 K7EQG2 157 aa13.99□□□□□ -0.17
CTDSP2-207ENST00000551594 S100A7P31151 101 aa13.99□□□□□ -0.17
CTDSP2-207ENST00000551594 RPL7L1Q6DKI1 246 aaKnown RBP13.99□□□□□ -0.17
CTDSP2-207ENST00000551594 HSD17B11Q8NBQ5 300 aa13.99□□□□□ -0.17
CTDSP2-207ENST00000551594 C17orf77Q96MU5 243 aa13.99□□□□□ -0.17
CTDSP2-207ENST00000551594 PFDN5Q99471 154 aa13.99□□□□□ -0.17
CTDSP2-207ENST00000551594 TRAV2A0A0B4J234 112 aa13.98□□□□□ -0.17
CTDSP2-207ENST00000551594 IGHV4-30-4P0DP06 118 aa13.98□□□□□ -0.17
CTDSP2-207ENST00000551594 CXCL2P19875 107 aa13.98□□□□□ -0.17
CTDSP2-207ENST00000551594 ZNF266Q14584 549 aa13.98□□□□□ -0.17
CTDSP2-207ENST00000551594 ZNF124Q15973 351 aa13.98□□□□□ -0.17
CTDSP2-207ENST00000551594 FFAR4Q5NUL3 377 aa13.98□□□□□ -0.17
CTDSP2-207ENST00000551594 NRN1Q9NPD7 142 aa13.98□□□□□ -0.17
CTDSP2-207ENST00000551594 GALR1P47211 349 aa13.97□□□□□ -0.17
CTDSP2-207ENST00000551594 SPATA31B1PQ5VZV4 182 aa13.97□□□□□ -0.17
CTDSP2-207ENST00000551594 S100A7AQ86SG5 101 aa13.97□□□□□ -0.17
CTDSP2-207ENST00000551594 APRG1Q8IVJ8 170 aa13.97□□□□□ -0.17
CTDSP2-207ENST00000551594 KCNRGQ8N5I3 272 aa13.97□□□□□ -0.17
CTDSP2-207ENST00000551594 CITED4Q96RK1 184 aa13.97□□□□□ -0.17
CTDSP2-207ENST00000551594 MAP6D1Q9H9H5 199 aa13.97□□□□□ -0.17
CTDSP2-207ENST00000551594 CYTL1Q9NRR1 136 aa13.97□□□□□ -0.17
CTDSP2-207ENST00000551594 KCNIP2Q9NS61 270 aa13.97□□□□□ -0.17
CTDSP2-207ENST00000551594 MRPS12O15235 138 aaKnown RBP13.96□□□□□ -0.17
CTDSP2-207ENST00000551594 SNRPCP09234 159 aaKnown RBP13.96□□□□□ -0.17
CTDSP2-207ENST00000551594 ZNF688P0C7X2 276 aa13.96□□□□□ -0.17
CTDSP2-207ENST00000551594 ATP6V0CP27449 155 aa13.96□□□□□ -0.17
CTDSP2-207ENST00000551594 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.96□□□□□ -0.17
CTDSP2-207ENST00000551594 GATAD1Q8WUU5 269 aa13.96□□□□□ -0.17
CTDSP2-207ENST00000551594 GPR82Q96P67 336 aa13.96□□□□□ -0.17
CTDSP2-207ENST00000551594 TUBA4BQ9H853 241 aa13.96□□□□□ -0.17
CTDSP2-207ENST00000551594 SRD5A3Q9H8P0 318 aa13.96□□□□□ -0.17
CTDSP2-207ENST00000551594 FRMD6-AS1P0C7T7 363 aa13.95□□□□□ -0.18
CTDSP2-207ENST00000551594 RPL7P18124 248 aaKnown RBP13.95□□□□□ -0.18
CTDSP2-207ENST00000551594 DEFB131AP59861 70 aa13.95□□□□□ -0.18
CTDSP2-207ENST00000551594 ZNF345Q14585 488 aa13.95□□□□□ -0.18
CTDSP2-207ENST00000551594 FAM78BQ5VT40 261 aa13.95□□□□□ -0.18
CTDSP2-207ENST00000551594 SH3BGRL3Q9H299 93 aa13.95□□□□□ -0.18
CTDSP2-207ENST00000551594 SEPSECSQ9HD40 501 aaKnown RBP13.95□□□□□ -0.18
CTDSP2-207ENST00000551594 TIMM9Q9Y5J7 89 aa13.95□□□□□ -0.18
CTDSP2-207ENST00000551594 BORCS7-ASMTA0A0B4J1R7 106 aa13.94□□□□□ -0.18
CTDSP2-207ENST00000551594 SOCS3O14543 225 aa13.94□□□□□ -0.18
CTDSP2-207ENST00000551594 TAAR5O14804 337 aa13.94□□□□□ -0.18
CTDSP2-207ENST00000551594 C1QBP02746 253 aa13.94□□□□□ -0.18
CTDSP2-207ENST00000551594 ATF4P18848 351 aaPredicted RBP13.94□□□□□ -0.18
CTDSP2-207ENST00000551594 MIR17HGQ75NE6 70 aa13.94□□□□□ -0.18
CTDSP2-207ENST00000551594 DNAH9Q9NYC9 4486 aa13.94□□□□□ -0.18
CTDSP2-207ENST00000551594 AGRNO00468 2067 aa13.94□□□□□ -0.18
CTDSP2-207ENST00000551594 A0A0D9SG52 128 aa13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 RBMY1BA6NDE4 496 aaKnown RBP13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 RBMY1EA6NEQ0 496 aaKnown RBP13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 H3BTX0 84 aa13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 EIF3GO75821 320 aaKnown RBP eCLIP13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 RBMY1DP0C7P1 496 aaKnown RBP13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 CMC4P56277 68 aaPredicted RBP13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 RAB2AP61019 212 aa13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 PSMG4Q5JS54 123 aa13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 IGFL4Q6B9Z1 124 aa13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 TMUB2Q71RG4 321 aa13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 BPIFA4PQ86YQ2 179 aa13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 ARPC5LQ9BPX5 153 aa13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 FAM110AQ9BQ89 295 aa13.93□□□□□ -0.18
CTDSP2-207ENST00000551594 TGP01266 2768 aa13.92□□□□□ -0.18
CTDSP2-207ENST00000551594 A8MZ25 164 aa13.92□□□□□ -0.18
CTDSP2-207ENST00000551594 LGALSLQ3ZCW2 172 aaPredicted RBP13.92□□□□□ -0.18
CTDSP2-207ENST00000551594 C16orf92Q96LL3 132 aa13.92□□□□□ -0.18
CTDSP2-207ENST00000551594 ASCL2Q99929 193 aa13.92□□□□□ -0.18
CTDSP2-207ENST00000551594 PSMG3Q9BT73 122 aaPredicted RBP13.92□□□□□ -0.18
CTDSP2-207ENST00000551594 SLC25A2Q9BXI2 301 aa13.92□□□□□ -0.18
CTDSP2-207ENST00000551594 RNF24Q9Y225 148 aa13.92□□□□□ -0.18
CTDSP2-207ENST00000551594 FUT9Q9Y231 359 aa13.92□□□□□ -0.18
CTDSP2-207ENST00000551594 H3BQ15 152 aa13.91□□□□□ -0.18
CTDSP2-207ENST00000551594 BCL2L11O43521 198 aa13.91□□□□□ -0.18
CTDSP2-207ENST00000551594 JTBO76095 146 aa13.91□□□□□ -0.18
CTDSP2-207ENST00000551594 DEFB1P60022 68 aa13.91□□□□□ -0.18
CTDSP2-207ENST00000551594 ACOT6Q3I5F7 207 aaPredicted RBP13.91□□□□□ -0.18
CTDSP2-207ENST00000551594 OR2G3Q8NGZ4 309 aa13.91□□□□□ -0.18
CTDSP2-207ENST00000551594 FAM167A-AS1Q96KT0 104 aa13.91□□□□□ -0.18
CTDSP2-207ENST00000551594 C20orf173Q96LM9 149 aa13.91□□□□□ -0.18
CTDSP2-207ENST00000551594 LINC00052Q96N35 136 aa13.91□□□□□ -0.18
CTDSP2-207ENST00000551594 A0A087X0K7 114 aa13.9□□□□□ -0.18
CTDSP2-207ENST00000551594 TRAV8-2A0A0B4J237 113 aa13.9□□□□□ -0.18
CTDSP2-207ENST00000551594 KANTRA0A1W2PQU2 76 aa13.9□□□□□ -0.18
CTDSP2-207ENST00000551594 KNCNA6PVL3 124 aa13.9□□□□□ -0.18
CTDSP2-207ENST00000551594 IGLC2P0DOY2 106 aa13.9□□□□□ -0.18
CTDSP2-207ENST00000551594 PYYP10082 97 aa13.9□□□□□ -0.18
CTDSP2-207ENST00000551594 M6PRP20645 277 aa13.9□□□□□ -0.18
CTDSP2-207ENST00000551594 ID1P41134 155 aa13.9□□□□□ -0.18
CTDSP2-207ENST00000551594 MEOX2P50222 304 aa13.9□□□□□ -0.18
CTDSP2-207ENST00000551594 SNRPD3P62318 126 aaKnown RBP13.9□□□□□ -0.18
CTDSP2-207ENST00000551594 LINC00322Q6ZN03 302 aaPredicted RBP13.9□□□□□ -0.18
CTDSP2-207ENST00000551594 GNPNAT1Q96EK6 184 aaPredicted RBP13.9□□□□□ -0.18
CTDSP2-207ENST00000551594 MRPL32Q9BYC8 188 aaKnown RBP13.9□□□□□ -0.18
CTDSP2-207ENST00000551594 ISLRO14498 428 aa13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 PFDN1O60925 122 aa13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 RPL35AP18077 110 aaKnown RBP13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 PSMB3P49720 205 aa13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 RHOBP62745 196 aa13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 FAM122CQ6P4D5 195 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms