RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, human

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX54-208	ENST00000551344	RAB32	Q13637	225 aa		13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	PMS2P11	Q13670	270 aa		13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	ZNF546	Q86UE3	836 aa		13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	C17orf77	Q96MU5	243 aa		13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	SCRT1	Q9BWW7	348 aa		13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	ARL6	Q9H0F7	186 aa		13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	LYRM2	Q9NU23	88 aa	Predicted RBP	13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	CST7	O76096	145 aa		13.8	□□□□□ -0.2
DDX54-208	ENST00000551344	MIF	P14174	115 aa		13.8	□□□□□ -0.2
DDX54-208	ENST00000551344	S100A10	P60903	97 aa		13.8	□□□□□ -0.2
DDX54-208	ENST00000551344	RAB31	Q13636	194 aa		13.8	□□□□□ -0.2
DDX54-208	ENST00000551344	GDF5OS	Q5U4N7	250 aa		13.8	□□□□□ -0.2
DDX54-208	ENST00000551344	EBLN2	Q6P2I7	272 aa		13.8	□□□□□ -0.2
DDX54-208	ENST00000551344	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.8	□□□□□ -0.2
DDX54-208	ENST00000551344	MARVELD1	Q9BSK0	173 aa		13.8	□□□□□ -0.2
DDX54-208	ENST00000551344	MFF	Q9GZY8	342 aa		13.8	□□□□□ -0.2
DDX54-208	ENST00000551344	RPRM	Q9NS64	109 aa		13.8	□□□□□ -0.2
DDX54-208	ENST00000551344	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.8	□□□□□ -0.2
DDX54-208	ENST00000551344	S100A11	P31949	105 aa		13.79	□□□□□ -0.2
DDX54-208	ENST00000551344	SULT1A1	P50225	295 aa		13.79	□□□□□ -0.2
DDX54-208	ENST00000551344	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.79	□□□□□ -0.2
DDX54-208	ENST00000551344	PATE2	Q6UY27	113 aa		13.79	□□□□□ -0.2
DDX54-208	ENST00000551344	TMEM252	Q8N6L7	170 aa		13.79	□□□□□ -0.2
DDX54-208	ENST00000551344		Q8NAQ8	132 aa		13.79	□□□□□ -0.2
DDX54-208	ENST00000551344	C11orf45	Q8TAV5	145 aa		13.79	□□□□□ -0.2
DDX54-208	ENST00000551344	ARV1	Q9H2C2	271 aa		13.79	□□□□□ -0.2
DDX54-208	ENST00000551344	CLEC5A	Q9NY25	188 aa		13.79	□□□□□ -0.2
DDX54-208	ENST00000551344	RYR3	Q15413	4870 aa		13.78	□□□□□ -0.2
DDX54-208	ENST00000551344	CYCS	P99999	105 aa	Known RBP	13.78	□□□□□ -0.2
DDX54-208	ENST00000551344	STX12	Q86Y82	276 aa		13.78	□□□□□ -0.2
DDX54-208	ENST00000551344	UHRF2	Q96PU4	802 aa		13.78	□□□□□ -0.2
DDX54-208	ENST00000551344	MGST2	Q99735	147 aa		13.78	□□□□□ -0.2
DDX54-208	ENST00000551344	UQCC1	Q9NVA1	299 aa		13.78	□□□□□ -0.2
DDX54-208	ENST00000551344	XCL2	Q9UBD3	114 aa		13.78	□□□□□ -0.2
DDX54-208	ENST00000551344	KLK5	Q9Y337	293 aa	Predicted RBP	13.78	□□□□□ -0.2
DDX54-208	ENST00000551344		X6R8D5	127 aa		13.78	□□□□□ -0.2
DDX54-208	ENST00000551344	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX54-208	ENST00000551344	DEFB4A	O15263	64 aa		13.77	□□□□□ -0.21
DDX54-208	ENST00000551344	RLN2	P04090	185 aa		13.77	□□□□□ -0.21
DDX54-208	ENST00000551344	CAMLG	P49069	296 aa		13.77	□□□□□ -0.21
DDX54-208	ENST00000551344	DEFB1	P60022	68 aa		13.77	□□□□□ -0.21
DDX54-208	ENST00000551344	HBG1	P69891	147 aa		13.77	□□□□□ -0.21
DDX54-208	ENST00000551344	HBG2	P69892	147 aa		13.77	□□□□□ -0.21
DDX54-208	ENST00000551344	ATP6V1F	Q16864	119 aa		13.77	□□□□□ -0.21
DDX54-208	ENST00000551344	VWC2	Q2TAL6	325 aa		13.77	□□□□□ -0.21
DDX54-208	ENST00000551344	OR4B1	Q8NGF8	309 aa		13.77	□□□□□ -0.21
DDX54-208	ENST00000551344	C20orf173	Q96LM9	149 aa		13.77	□□□□□ -0.21
DDX54-208	ENST00000551344	NMES1	Q9C002	83 aa		13.77	□□□□□ -0.21
DDX54-208	ENST00000551344	IGHV4-28	A0A0C4DH34	117 aa		13.76	□□□□□ -0.21
DDX54-208	ENST00000551344		A0A0J9YX75	114 aa		13.76	□□□□□ -0.21
DDX54-208	ENST00000551344	IGKV3-20	P01619	116 aa		13.76	□□□□□ -0.21
DDX54-208	ENST00000551344	FGL1	Q08830	312 aa		13.76	□□□□□ -0.21
DDX54-208	ENST00000551344		Q6ZRG5	221 aa		13.76	□□□□□ -0.21
DDX54-208	ENST00000551344	LINC00305	Q7Z4B0	112 aa		13.76	□□□□□ -0.21
DDX54-208	ENST00000551344	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX54-208	ENST00000551344	HRH4	Q9H3N8	390 aa		13.76	□□□□□ -0.21
DDX54-208	ENST00000551344	WDR83OS	Q9Y284	106 aa		13.76	□□□□□ -0.21
DDX54-208	ENST00000551344		A0A087X0K7	114 aa		13.75	□□□□□ -0.21
DDX54-208	ENST00000551344	IGSF23	A1L1A6	192 aa		13.75	□□□□□ -0.21
DDX54-208	ENST00000551344	SIX6	O95475	246 aa		13.75	□□□□□ -0.21
DDX54-208	ENST00000551344	RBMY1A1	P0DJD3	496 aa	Known RBP	13.75	□□□□□ -0.21
DDX54-208	ENST00000551344	RBMY1C	P0DJD4	496 aa		13.75	□□□□□ -0.21
DDX54-208	ENST00000551344	NANOS2	P60321	138 aa	Known RBP	13.75	□□□□□ -0.21
DDX54-208	ENST00000551344	PSG9	Q00887	426 aa		13.75	□□□□□ -0.21
DDX54-208	ENST00000551344	RBMY1F	Q15415	496 aa	Known RBP	13.75	□□□□□ -0.21
DDX54-208	ENST00000551344	FAM78B	Q5VT40	261 aa		13.75	□□□□□ -0.21
DDX54-208	ENST00000551344	TMEM37	Q8WXS4	190 aa		13.75	□□□□□ -0.21
DDX54-208	ENST00000551344	DNAJC4	Q9NNZ3	241 aa		13.75	□□□□□ -0.21
DDX54-208	ENST00000551344	TRAV8-2	A0A0B4J237	113 aa		13.74	□□□□□ -0.21
DDX54-208	ENST00000551344		E5RGE8	158 aa		13.74	□□□□□ -0.21
DDX54-208	ENST00000551344		F6UB75	175 aa		13.74	□□□□□ -0.21
DDX54-208	ENST00000551344	COX7A2P2	O60397	106 aa		13.74	□□□□□ -0.21
DDX54-208	ENST00000551344	ZNF709	Q8N972	641 aa		13.74	□□□□□ -0.21
DDX54-208	ENST00000551344	CHAC2	Q8WUX2	184 aa		13.74	□□□□□ -0.21
DDX54-208	ENST00000551344	MRPS12	O15235	138 aa	Known RBP	13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	DUSP14	O95147	198 aa	Known RBP	13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	RPL29	P47914	159 aa	Known RBP	13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	PRR20E	P86478	221 aa		13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	PRR20C	P86479	221 aa		13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	PRR20D	P86480	221 aa		13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	PRR20B	P86481	221 aa		13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	PRR20A	P86496	221 aa		13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	C10orf113	Q5VZT2	155 aa		13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	BPIFA4P	Q86YQ2	179 aa		13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	NEU1	Q99519	415 aa		13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	SLC25A31	Q9H0C2	315 aa		13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	LYST	Q99698	3801 aa		13.73	□□□□□ -0.21
DDX54-208	ENST00000551344	SMIM9	A6NGZ8	99 aa		13.72	□□□□□ -0.21
DDX54-208	ENST00000551344		A8MTW9	85 aa		13.72	□□□□□ -0.21
DDX54-208	ENST00000551344	FXYD7	P58549	80 aa		13.72	□□□□□ -0.21
DDX54-208	ENST00000551344	MIC13	Q5XKP0	118 aa		13.72	□□□□□ -0.21
DDX54-208	ENST00000551344	IGFL4	Q6B9Z1	124 aa		13.72	□□□□□ -0.21
DDX54-208	ENST00000551344	OR1L4	Q8NGR5	311 aa		13.72	□□□□□ -0.21
DDX54-208	ENST00000551344	LRRC20	Q8TCA0	184 aa		13.72	□□□□□ -0.21
DDX54-208	ENST00000551344	SACS	Q9NZJ4	4579 aa		13.71	□□□□□ -0.21
DDX54-208	ENST00000551344	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.71	□□□□□ -0.21
DDX54-208	ENST00000551344	SSNA1	O43805	119 aa		13.71	□□□□□ -0.21
DDX54-208	ENST00000551344	MPDU1	O75352	247 aa		13.71	□□□□□ -0.21
DDX54-208	ENST00000551344	ZNF705D	P0CH99	300 aa	Predicted RBP	13.71	□□□□□ -0.21

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