RNA–Protein interactions for RNA: ENST00000551098.5

DDX23-208, Transcript of DEAD-box helicase 23, human

TSL 2

Gene DDX23, Length 1,083 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-208	ENST00000551098	TRAV10	A0A0B4J240	114 aa		12.55	□□□□□ -0.4
DDX23-208	ENST00000551098		A0A0J9YX75	114 aa		12.55	□□□□□ -0.4
DDX23-208	ENST00000551098	FNDC10	F2Z333	226 aa		12.55	□□□□□ -0.4
DDX23-208	ENST00000551098	CCS	O14618	274 aa		12.55	□□□□□ -0.4
DDX23-208	ENST00000551098	MBP	P02686	304 aa	Predicted RBP	12.55	□□□□□ -0.4
DDX23-208	ENST00000551098	TEPP	Q6URK8	271 aa		12.55	□□□□□ -0.4
DDX23-208	ENST00000551098		Q6ZTC4	211 aa		12.55	□□□□□ -0.4
DDX23-208	ENST00000551098	SCRT1	Q9BWW7	348 aa		12.55	□□□□□ -0.4
DDX23-208	ENST00000551098	NUDT15	Q9NV35	164 aa		12.55	□□□□□ -0.4
DDX23-208	ENST00000551098	C7orf66	A4D0T2	115 aa		12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	C5orf51	A6NDU8	294 aa		12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	SMIM9	A6NGZ8	99 aa		12.54	□□□□□ -0.4
DDX23-208	ENST00000551098		H3BRN7	92 aa		12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	GOSR2	O14653	212 aa		12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	RPL7	P18124	248 aa	Known RBP	12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	ZNF431	Q8TF32	576 aa	Predicted RBP	12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	C20orf173	Q96LM9	149 aa		12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	NEU1	Q99519	415 aa		12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	SHANK2-AS3	Q9BTD1	123 aa		12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	CCDC32	Q9BV29	185 aa		12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	ARL6	Q9H0F7	186 aa		12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	SLC35B3	Q9H1N7	401 aa		12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	RCL1	Q9Y2P8	373 aa	Known RBP	12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	GOLT1B	Q9Y3E0	138 aa		12.54	□□□□□ -0.4
DDX23-208	ENST00000551098	TMEM189	A5PLL7	270 aa		12.53	□□□□□ -0.4
DDX23-208	ENST00000551098	BCAP31	P51572	246 aa		12.53	□□□□□ -0.4
DDX23-208	ENST00000551098	EMP1	P54849	157 aa		12.53	□□□□□ -0.4
DDX23-208	ENST00000551098	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.53	□□□□□ -0.4
DDX23-208	ENST00000551098	LRRC20	Q8TCA0	184 aa		12.53	□□□□□ -0.4
DDX23-208	ENST00000551098	SEC22C	Q9BRL7	303 aa		12.53	□□□□□ -0.4
DDX23-208	ENST00000551098	KRTAP3-3	Q9BYR6	98 aa		12.53	□□□□□ -0.4
DDX23-208	ENST00000551098	KRTAP3-2	Q9BYR7	98 aa		12.53	□□□□□ -0.4
DDX23-208	ENST00000551098	CELA1	Q9UNI1	258 aa		12.53	□□□□□ -0.4
DDX23-208	ENST00000551098	RNF24	Q9Y225	148 aa		12.53	□□□□□ -0.4
DDX23-208	ENST00000551098	LSM5	Q9Y4Y9	91 aa	Known RBP	12.53	□□□□□ -0.4
DDX23-208	ENST00000551098	FAM240B	A0A1B0GVZ2	78 aa		12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	DEDD	O75618	318 aa		12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	H2AFB2	P0C5Z0	115 aa		12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	ZNF705D	P0CH99	300 aa	Predicted RBP	12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	ZNF705B	P0CI00	300 aa	Predicted RBP	12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	PLP1	P60201	277 aa		12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	SLC38A11	Q08AI6	406 aa		12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	C12orf74	Q32Q52	190 aa		12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	IGFL4	Q6B9Z1	124 aa		12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	MZT2B	Q6NZ67	158 aa		12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	ZNF767P	Q75MW2	155 aa		12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	C12orf45	Q8N5I9	185 aa	Predicted RBP	12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	RPP25L	Q8N5L8	163 aa	Known RBP	12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	ZNF709	Q8N972	641 aa		12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	UHRF2	Q96PU4	802 aa		12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	GGACT	Q9BVM4	153 aa		12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	RFNG	Q9Y644	331 aa		12.52	□□□□□ -0.41
DDX23-208	ENST00000551098	DEFB131B	A0A096LNP1	70 aa		12.51	□□□□□ -0.41
DDX23-208	ENST00000551098	DUSP14	O95147	198 aa	Known RBP	12.51	□□□□□ -0.41
DDX23-208	ENST00000551098	SPART-AS1	P0CW21	52 aa		12.51	□□□□□ -0.41
DDX23-208	ENST00000551098	CAV2	P51636	162 aa		12.51	□□□□□ -0.41
DDX23-208	ENST00000551098	PXDC1	Q5TGL8	231 aa		12.51	□□□□□ -0.41
DDX23-208	ENST00000551098	ZNF546	Q86UE3	836 aa		12.51	□□□□□ -0.41
DDX23-208	ENST00000551098	RNF182	Q8N6D2	247 aa		12.51	□□□□□ -0.41
DDX23-208	ENST00000551098	S100Z	Q8WXG8	99 aa		12.51	□□□□□ -0.41
DDX23-208	ENST00000551098	C17orf77	Q96MU5	243 aa		12.51	□□□□□ -0.41
DDX23-208	ENST00000551098	TMEM208	Q9BTX3	173 aa		12.51	□□□□□ -0.41
DDX23-208	ENST00000551098	APLN	Q9ULZ1	77 aa		12.51	□□□□□ -0.41
DDX23-208	ENST00000551098		K7EPK0	472 aa		12.5	□□□□□ -0.41
DDX23-208	ENST00000551098	AGPAT2	O15120	278 aa		12.5	□□□□□ -0.41
DDX23-208	ENST00000551098	HBE1	P02100	147 aa		12.5	□□□□□ -0.41
DDX23-208	ENST00000551098	PVALB	P20472	110 aa	Predicted RBP	12.5	□□□□□ -0.41
DDX23-208	ENST00000551098	ARL16	Q0P5N6	197 aa		12.5	□□□□□ -0.41
DDX23-208	ENST00000551098	RAB31	Q13636	194 aa		12.5	□□□□□ -0.41
DDX23-208	ENST00000551098	LINC00299	Q6ZSB3	139 aa		12.5	□□□□□ -0.41
DDX23-208	ENST00000551098	ZNF738	Q8NE65	137 aa		12.5	□□□□□ -0.41
DDX23-208	ENST00000551098	C2orf50	Q96LR7	162 aa		12.5	□□□□□ -0.41
DDX23-208	ENST00000551098	ARV1	Q9H2C2	271 aa		12.5	□□□□□ -0.41
DDX23-208	ENST00000551098	IGHV4-4	A0A075B6R2	117 aa		12.49	□□□□□ -0.41
DDX23-208	ENST00000551098	CNN1	P51911	297 aa	Known RBP	12.49	□□□□□ -0.41
DDX23-208	ENST00000551098	PATE2	Q6UY27	113 aa		12.49	□□□□□ -0.41
DDX23-208	ENST00000551098	RNF126	Q9BV68	326 aa		12.49	□□□□□ -0.41
DDX23-208	ENST00000551098	TRAV8-2	A0A0B4J237	113 aa		12.48	□□□□□ -0.41
DDX23-208	ENST00000551098	COX7A2P2	O60397	106 aa		12.48	□□□□□ -0.41
DDX23-208	ENST00000551098	CST7	O76096	145 aa		12.48	□□□□□ -0.41
DDX23-208	ENST00000551098	AMBP	P02760	352 aa		12.48	□□□□□ -0.41
DDX23-208	ENST00000551098	S100A10	P60903	97 aa		12.48	□□□□□ -0.41
DDX23-208	ENST00000551098	LINC00305	Q7Z4B0	112 aa		12.48	□□□□□ -0.41
DDX23-208	ENST00000551098	C1orf158	Q8N1D5	194 aa		12.48	□□□□□ -0.41
DDX23-208	ENST00000551098	PPP1R14D	Q9NXH3	145 aa		12.48	□□□□□ -0.41
DDX23-208	ENST00000551098	TEX48	A0A1B0GUV7	120 aa		12.47	□□□□□ -0.41
DDX23-208	ENST00000551098	RHOB	P62745	196 aa		12.47	□□□□□ -0.41
DDX23-208	ENST00000551098	RRN3P1	Q2M238	152 aa		12.47	□□□□□ -0.41
DDX23-208	ENST00000551098	IGF2BP2-AS1	Q96M15	143 aa		12.47	□□□□□ -0.41
DDX23-208	ENST00000551098		A0A087X0K7	114 aa		12.46	□□□□□ -0.41
DDX23-208	ENST00000551098	LOC102723971	A0A1B0GUV8	181 aa		12.46	□□□□□ -0.41
DDX23-208	ENST00000551098	FAM24A	A6NFZ4	105 aa		12.46	□□□□□ -0.41
DDX23-208	ENST00000551098		A8MTW9	85 aa		12.46	□□□□□ -0.41
DDX23-208	ENST00000551098	CXCL3	P19876	107 aa		12.46	□□□□□ -0.41
DDX23-208	ENST00000551098	CAMLG	P49069	296 aa		12.46	□□□□□ -0.41
DDX23-208	ENST00000551098	ASAH1	Q13510	395 aa		12.46	□□□□□ -0.41
DDX23-208	ENST00000551098	PSG3	Q16557	428 aa		12.46	□□□□□ -0.41
DDX23-208	ENST00000551098	SPINK13	Q1W4C9	94 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms