RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 PATE2Q6UY27 113 aa8.28□□□□□ -1.08
RAB5B-208ENST00000550283 TMEM144Q7Z5S9 345 aa8.28□□□□□ -1.08
RAB5B-208ENST00000550283 TMEM217Q8N7C4 229 aa8.28□□□□□ -1.08
RAB5B-208ENST00000550283 STXBP6Q8NFX7 210 aa8.28□□□□□ -1.08
RAB5B-208ENST00000550283 TMED6Q8WW62 240 aa8.28□□□□□ -1.08
RAB5B-208ENST00000550283 SLC25A31Q9H0C2 315 aa8.28□□□□□ -1.08
RAB5B-208ENST00000550283 DOK5Q9P104 306 aa8.28□□□□□ -1.08
RAB5B-208ENST00000550283 OR4C46A6NHA9 309 aa8.27□□□□□ -1.09
RAB5B-208ENST00000550283 ZNF688P0C7X2 276 aa8.27□□□□□ -1.09
RAB5B-208ENST00000550283 NHLRC4P0CG21 123 aaPredicted RBP8.27□□□□□ -1.09
RAB5B-208ENST00000550283 PRB4P10163 310 aaPredicted RBP8.27□□□□□ -1.09
RAB5B-208ENST00000550283 RPL35AP18077 110 aaKnown RBP8.27□□□□□ -1.09
RAB5B-208ENST00000550283 CAV2P51636 162 aa8.27□□□□□ -1.09
RAB5B-208ENST00000550283 DEFB131AP59861 70 aa8.27□□□□□ -1.09
RAB5B-208ENST00000550283 RPL11P62913 178 aaKnown RBP8.27□□□□□ -1.09
RAB5B-208ENST00000550283 EWSR1Q01844 656 aaKnown RBP eCLIP8.27□□□□□ -1.09
RAB5B-208ENST00000550283 NHLH2Q02577 135 aa8.27□□□□□ -1.09
RAB5B-208ENST00000550283 CYP2G1PQ6ZSU1 146 aa8.27□□□□□ -1.09
RAB5B-208ENST00000550283 TMEM252Q8N6L7 170 aa8.27□□□□□ -1.09
RAB5B-208ENST00000550283 RNF141Q8WVD5 230 aa8.27□□□□□ -1.09
RAB5B-208ENST00000550283 MGST2Q99735 147 aa8.27□□□□□ -1.09
RAB5B-208ENST00000550283 SCRT1Q9BWW7 348 aa8.27□□□□□ -1.09
RAB5B-208ENST00000550283 LYRM2Q9NU23 88 aaPredicted RBP8.27□□□□□ -1.09
RAB5B-208ENST00000550283 RABAC1Q9UI14 185 aa8.27□□□□□ -1.09
RAB5B-208ENST00000550283 KNCNA6PVL3 124 aa8.26□□□□□ -1.09
RAB5B-208ENST00000550283 TEX46H3BTG2 121 aa8.26□□□□□ -1.09
RAB5B-208ENST00000550283 LINC00869P0C866 280 aa8.26□□□□□ -1.09
RAB5B-208ENST00000550283 ORM2P19652 201 aa8.26□□□□□ -1.09
RAB5B-208ENST00000550283 SMCPP49901 116 aaPredicted RBP8.26□□□□□ -1.09
RAB5B-208ENST00000550283 MORN5Q5VZ52 161 aa8.26□□□□□ -1.09
RAB5B-208ENST00000550283 CCDC28AQ8IWP9 274 aa8.26□□□□□ -1.09
RAB5B-208ENST00000550283 OR10P1Q8NGE3 313 aa8.26□□□□□ -1.09
RAB5B-208ENST00000550283 UHRF2Q96PU4 802 aa8.26□□□□□ -1.09
RAB5B-208ENST00000550283 SLC45A2Q9UMX9 530 aa8.26□□□□□ -1.09
RAB5B-208ENST00000550283 ZNF705EA8MWA4 302 aaPredicted RBP8.25□□□□□ -1.09
RAB5B-208ENST00000550283 SOCS3O14543 225 aa8.25□□□□□ -1.09
RAB5B-208ENST00000550283 AGPAT2O15120 278 aa8.25□□□□□ -1.09
RAB5B-208ENST00000550283 GIG44P09565 113 aaPredicted RBP8.25□□□□□ -1.09
RAB5B-208ENST00000550283 SIGLEC15Q6ZMC9 328 aa8.25□□□□□ -1.09
RAB5B-208ENST00000550283 BPIFCQ8NFQ6 507 aa8.25□□□□□ -1.09
RAB5B-208ENST00000550283 OR1B1Q8NGR6 318 aa8.25□□□□□ -1.09
RAB5B-208ENST00000550283 GGTLC1Q9BX51 225 aa8.25□□□□□ -1.09
RAB5B-208ENST00000550283 LOC102724200A0A096LPH7 203 aaPredicted RBP8.24□□□□□ -1.09
RAB5B-208ENST00000550283 A0A1W2PS18 150 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 ZNF98A6NK75 572 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 KRBOX1C9JBD0 128 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 FNDC10F2Z333 226 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 H3BRN7 92 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 DNASE2O00115 360 aaPredicted RBP8.24□□□□□ -1.09
RAB5B-208ENST00000550283 LCE2BO14633 110 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 SCGB2A1O75556 95 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 SULT1A1P50225 295 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 BAXQ07812 192 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 VWC2Q2TAL6 325 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 GDF5OSQ5U4N7 250 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 MIC13Q5XKP0 118 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 IGFL4Q6B9Z1 124 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 EIF4E3Q8N5X7 224 aaKnown RBP8.24□□□□□ -1.09
RAB5B-208ENST00000550283 SAT2Q96F10 170 aaPredicted RBP8.24□□□□□ -1.09
RAB5B-208ENST00000550283 C20orf173Q96LM9 149 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 OVOL2Q9BRP0 275 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 TMEM231Q9H6L2 316 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 EDA2RQ9HAV5 297 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 WFDC1Q9HC57 220 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 NPVFQ9HCQ7 196 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 WDR83OSQ9Y284 106 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 RFNGQ9Y644 331 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 AGRNO00468 2067 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 BIRC6Q9NR09 4857 aa8.24□□□□□ -1.09
RAB5B-208ENST00000550283 STARD9Q9P2P6 4700 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 CSMD3Q7Z407 3707 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 TRAV2A0A0B4J234 112 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 UBE2L5PA0A1B0GUS4 154 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 SNRPCP09234 159 aaKnown RBP8.23□□□□□ -1.09
RAB5B-208ENST00000550283 SULT1A2P50226 295 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 PLP1P60201 277 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 BLOC1S1P78537 153 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 ZNF266Q14584 549 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 TEPPQ6URK8 271 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 UQCC3Q6UW78 93 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 STX12Q86Y82 276 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 TMEM37Q8WXS4 190 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 LINC00052Q96N35 136 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 SLC25A39Q9BZJ4 359 aaPredicted RBP8.23□□□□□ -1.09
RAB5B-208ENST00000550283 ARV1Q9H2C2 271 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 SLC25A22Q9H936 323 aa8.23□□□□□ -1.09
RAB5B-208ENST00000550283 EPPK1P58107 5090 aaKnown RBP8.22□□□□□ -1.09
RAB5B-208ENST00000550283 RAB19A4D1S5 217 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 MRPS12O15235 138 aaKnown RBP8.22□□□□□ -1.09
RAB5B-208ENST00000550283 SEC11BP0C7V7 166 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 HLA-DMBP28068 263 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 BMI1P35226 326 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 PAFAH1B2P68402 229 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 CLINT1Q14677 625 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 DEFB135Q30KP9 77 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 GCSAMLQ5JQS6 135 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 PSMG4Q5JS54 123 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 GRAMD2BQ96HH9 432 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 SPATA25Q9BR10 227 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms