RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 EWSR1Q01844 656 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHMP1A-208ENST00000550102 RAB31Q13636 194 aa12.57□□□□□ -0.4
CHMP1A-208ENST00000550102 FOXI2Q6ZQN5 318 aa12.57□□□□□ -0.4
CHMP1A-208ENST00000550102 C16orf92Q96LL3 132 aa12.57□□□□□ -0.4
CHMP1A-208ENST00000550102 UHRF2Q96PU4 802 aa12.57□□□□□ -0.4
CHMP1A-208ENST00000550102 MGST2Q99735 147 aa12.57□□□□□ -0.4
CHMP1A-208ENST00000550102 RSG1Q9BU20 258 aa12.57□□□□□ -0.4
CHMP1A-208ENST00000550102 C1QTNF4Q9BXJ3 329 aa12.57□□□□□ -0.4
CHMP1A-208ENST00000550102 DYNC2H1Q8NCM8 4307 aaKnown RBP12.57□□□□□ -0.4
CHMP1A-208ENST00000550102 UBE2L5PA0A1B0GUS4 154 aa12.56□□□□□ -0.4
CHMP1A-208ENST00000550102 SIX6O95475 246 aa12.56□□□□□ -0.4
CHMP1A-208ENST00000550102 PMS2P11Q13670 270 aa12.56□□□□□ -0.4
CHMP1A-208ENST00000550102 SPATA31B1PQ5VZV4 182 aa12.56□□□□□ -0.4
CHMP1A-208ENST00000550102 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.56□□□□□ -0.4
CHMP1A-208ENST00000550102 TMEM252Q8N6L7 170 aa12.56□□□□□ -0.4
CHMP1A-208ENST00000550102 NMES1Q9C002 83 aa12.56□□□□□ -0.4
CHMP1A-208ENST00000550102 SAV1Q9H4B6 383 aaPredicted RBP12.56□□□□□ -0.4
CHMP1A-208ENST00000550102 RPRMQ9NS64 109 aa12.56□□□□□ -0.4
CHMP1A-208ENST00000550102 LCE6AA0A183 80 aa12.55□□□□□ -0.4
CHMP1A-208ENST00000550102 COX7A2P2O60397 106 aa12.55□□□□□ -0.4
CHMP1A-208ENST00000550102 S100A11P31949 105 aa12.55□□□□□ -0.4
CHMP1A-208ENST00000550102 CAMLGP49069 296 aa12.55□□□□□ -0.4
CHMP1A-208ENST00000550102 VWC2Q2TAL6 325 aa12.55□□□□□ -0.4
CHMP1A-208ENST00000550102 GDF5OSQ5U4N7 250 aa12.55□□□□□ -0.4
CHMP1A-208ENST00000550102 ARV1Q9H2C2 271 aa12.55□□□□□ -0.4
CHMP1A-208ENST00000550102 WDR83OSQ9Y284 106 aa12.55□□□□□ -0.4
CHMP1A-208ENST00000550102 NUPR2A6NF83 97 aa12.54□□□□□ -0.4
CHMP1A-208ENST00000550102 SSNA1O43805 119 aa12.54□□□□□ -0.4
CHMP1A-208ENST00000550102 RLN2P04090 185 aa12.54□□□□□ -0.4
CHMP1A-208ENST00000550102 DEFB1P60022 68 aa12.54□□□□□ -0.4
CHMP1A-208ENST00000550102 CYCSP99999 105 aaKnown RBP12.54□□□□□ -0.4
CHMP1A-208ENST00000550102 LRRC37A5PQ49AS3 106 aa12.54□□□□□ -0.4
CHMP1A-208ENST00000550102 EBLN2Q6P2I7 272 aa12.54□□□□□ -0.4
CHMP1A-208ENST00000550102 PATE2Q6UY27 113 aa12.54□□□□□ -0.4
CHMP1A-208ENST00000550102 CLUHP3Q96NS8 147 aa12.54□□□□□ -0.4
CHMP1A-208ENST00000550102 CLEC5AQ9NY25 188 aa12.54□□□□□ -0.4
CHMP1A-208ENST00000550102 ELOA3CA0A087WX78 387 aaPredicted RBP12.53□□□□□ -0.4
CHMP1A-208ENST00000550102 A0A087X0K7 114 aa12.53□□□□□ -0.4
CHMP1A-208ENST00000550102 E5RGE8 158 aa12.53□□□□□ -0.4
CHMP1A-208ENST00000550102 IGKV3-20P01619 116 aa12.53□□□□□ -0.4
CHMP1A-208ENST00000550102 MIFP14174 115 aa12.53□□□□□ -0.4
CHMP1A-208ENST00000550102 BAXQ07812 192 aa12.53□□□□□ -0.4
CHMP1A-208ENST00000550102 Q8NAQ8 132 aa12.53□□□□□ -0.4
CHMP1A-208ENST00000550102 CSNK1G2-AS1Q8NCQ2 148 aa12.53□□□□□ -0.4
CHMP1A-208ENST00000550102 C20orf173Q96LM9 149 aa12.53□□□□□ -0.4
CHMP1A-208ENST00000550102 C17orf77Q96MU5 243 aa12.53□□□□□ -0.4
CHMP1A-208ENST00000550102 XCL2Q9UBD3 114 aa12.53□□□□□ -0.4
CHMP1A-208ENST00000550102 RYR3Q15413 4870 aa12.52□□□□□ -0.4
CHMP1A-208ENST00000550102 A0A0J9YX75 114 aa12.52□□□□□ -0.41
CHMP1A-208ENST00000550102 ZNF705EA8MWA4 302 aaPredicted RBP12.52□□□□□ -0.41
CHMP1A-208ENST00000550102 JTBO76095 146 aa12.52□□□□□ -0.41
CHMP1A-208ENST00000550102 H2BFSP57053 126 aa12.52□□□□□ -0.41
CHMP1A-208ENST00000550102 FGL1Q08830 312 aa12.52□□□□□ -0.41
CHMP1A-208ENST00000550102 ATP6V1FQ16864 119 aa12.52□□□□□ -0.41
CHMP1A-208ENST00000550102 LINC00305Q7Z4B0 112 aa12.52□□□□□ -0.41
CHMP1A-208ENST00000550102 OR4B1Q8NGF8 309 aa12.52□□□□□ -0.41
CHMP1A-208ENST00000550102 MFFQ9GZY8 342 aa12.52□□□□□ -0.41
CHMP1A-208ENST00000550102 SLC25A31Q9H0C2 315 aa12.52□□□□□ -0.41
CHMP1A-208ENST00000550102 OR5AC2Q9NZP5 309 aa12.52□□□□□ -0.41
CHMP1A-208ENST00000550102 IGHV4-28A0A0C4DH34 117 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 F6UB75 175 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 DEFB4AO15263 64 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 PTTG1O95997 202 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 PET100P0DJ07 73 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 FGF7P21781 194 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 PRR20EP86478 221 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 PRR20CP86479 221 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 PRR20DP86480 221 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 PRR20BP86481 221 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 PRR20AP86496 221 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 C10orf113Q5VZT2 155 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 MIC13Q5XKP0 118 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 Q6ZRG5 221 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 LYSTQ99698 3801 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 X6R8D5 127 aa12.51□□□□□ -0.41
CHMP1A-208ENST00000550102 TRAV8-2A0A0B4J237 113 aa12.5□□□□□ -0.41
CHMP1A-208ENST00000550102 MPDU1O75352 247 aa12.5□□□□□ -0.41
CHMP1A-208ENST00000550102 CXCL2P19875 107 aa12.5□□□□□ -0.41
CHMP1A-208ENST00000550102 OPCMLQ14982 345 aa12.5□□□□□ -0.41
CHMP1A-208ENST00000550102 FAM78BQ5VT40 261 aa12.5□□□□□ -0.41
CHMP1A-208ENST00000550102 BPIFA4PQ86YQ2 179 aa12.5□□□□□ -0.41
CHMP1A-208ENST00000550102 RNF182Q8N6D2 247 aa12.5□□□□□ -0.41
CHMP1A-208ENST00000550102 ZNF738Q8NE65 137 aa12.5□□□□□ -0.41
CHMP1A-208ENST00000550102 OR1L4Q8NGR5 311 aa12.5□□□□□ -0.41
CHMP1A-208ENST00000550102 C11orf45Q8TAV5 145 aa12.5□□□□□ -0.41
CHMP1A-208ENST00000550102 PPP1R1CQ8WVI7 109 aa12.5□□□□□ -0.41
CHMP1A-208ENST00000550102 PFDN5Q99471 154 aa12.5□□□□□ -0.41
CHMP1A-208ENST00000550102 RPL29P47914 159 aaKnown RBP12.49□□□□□ -0.41
CHMP1A-208ENST00000550102 B2MP61769 119 aa12.49□□□□□ -0.41
CHMP1A-208ENST00000550102 PSG9Q00887 426 aa12.49□□□□□ -0.41
CHMP1A-208ENST00000550102 CEMP1Q6PRD7 247 aaPredicted RBP12.49□□□□□ -0.41
CHMP1A-208ENST00000550102 LCN15Q6UWW0 184 aa12.49□□□□□ -0.41
CHMP1A-208ENST00000550102 ZNF709Q8N972 641 aa12.49□□□□□ -0.41
CHMP1A-208ENST00000550102 OR5C1Q8NGR4 320 aa12.49□□□□□ -0.41
CHMP1A-208ENST00000550102 LRRC20Q8TCA0 184 aa12.49□□□□□ -0.41
CHMP1A-208ENST00000550102 CHAC2Q8WUX2 184 aa12.49□□□□□ -0.41
CHMP1A-208ENST00000550102 TMEM37Q8WXS4 190 aa12.49□□□□□ -0.41
CHMP1A-208ENST00000550102 DNAJC4Q9NNZ3 241 aa12.49□□□□□ -0.41
CHMP1A-208ENST00000550102 SLC39A9Q9NUM3 307 aa12.49□□□□□ -0.41
CHMP1A-208ENST00000550102 A8MTW9 85 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms