RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 B4DSR2 109 aa7.78□□□□□ -1.16
RAB5B-206ENST00000549505 DLEU1O43261 78 aa7.78□□□□□ -1.16
RAB5B-206ENST00000549505 MT-ND6P03923 174 aa7.78□□□□□ -1.16
RAB5B-206ENST00000549505 FOXA3P55318 350 aaPredicted RBP7.78□□□□□ -1.16
RAB5B-206ENST00000549505 RAB4BP61018 213 aa7.78□□□□□ -1.16
RAB5B-206ENST00000549505 LOXL1Q08397 574 aaPredicted RBP7.78□□□□□ -1.16
RAB5B-206ENST00000549505 HES1Q14469 280 aa7.78□□□□□ -1.16
RAB5B-206ENST00000549505 C1orf194Q5T5A4 169 aa7.78□□□□□ -1.16
RAB5B-206ENST00000549505 GATD1Q8NB37 220 aa7.78□□□□□ -1.16
RAB5B-206ENST00000549505 Q9H3A6 140 aa7.78□□□□□ -1.16
RAB5B-206ENST00000549505 ZFAND3Q9H8U3 227 aa7.78□□□□□ -1.16
RAB5B-206ENST00000549505 ZNF705AQ6ZN79 300 aaPredicted RBP7.78□□□□□ -1.16
RAB5B-206ENST00000549505 NBEAQ8NFP9 2946 aa7.78□□□□□ -1.16
RAB5B-206ENST00000549505 IGHV3-48P01763 117 aa7.78□□□□□ -1.16
RAB5B-206ENST00000549505 OR5I1Q13606 314 aa7.78□□□□□ -1.16
RAB5B-206ENST00000549505 SOX21Q9Y651 276 aaPredicted RBP7.78□□□□□ -1.16
RAB5B-206ENST00000549505 DCHS2Q6V1P9 2916 aa7.78□□□□□ -1.16
RAB5B-206ENST00000549505 IZUMO1RA6ND01 250 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 ATP6V0E1O15342 81 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 IGHG2P01859 326 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 ADMP35318 185 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 ATP5J2P56134 94 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 CFHR3Q02985 330 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 Q0VG73 95 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 WDR73Q6P4I2 378 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 ATP5L2Q7Z4Y8 100 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 OR4B1Q8NGF8 309 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 RPH3ALQ9UNE2 315 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 ZFP30Q9Y2G7 519 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 TMEM89A2RUT3 159 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 PGPA6NDG6 321 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 NCBP2LA6PVI3 153 aaKnown RBP7.77□□□□□ -1.17
RAB5B-206ENST00000549505 GNG7O60262 68 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 RPL19P84098 196 aaKnown RBP7.77□□□□□ -1.17
RAB5B-206ENST00000549505 SRSF2Q01130 221 aaKnown RBP7.77□□□□□ -1.17
RAB5B-206ENST00000549505 SAPCD1Q5SSQ6 148 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 C17orf77Q96MU5 243 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 GSX1Q9H4S2 264 aaPredicted RBP7.77□□□□□ -1.17
RAB5B-206ENST00000549505 FBXL7Q9UJT9 491 aa7.77□□□□□ -1.17
RAB5B-206ENST00000549505 A0A1W2PPQ1 181 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 A8MWP6 167 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 CD24P25063 80 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 LYZP61626 148 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 IBA57Q5T440 356 aaKnown RBP7.76□□□□□ -1.17
RAB5B-206ENST00000549505 PSMG3-AS1Q96PY0 264 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 A0A1B0GXF2 115 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 PPIFP30405 207 aaKnown RBP7.76□□□□□ -1.17
RAB5B-206ENST00000549505 PSG9Q00887 426 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 KLF17Q5JT82 389 aaPredicted RBP7.76□□□□□ -1.17
RAB5B-206ENST00000549505 PRSS57Q6UWY2 283 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 Q86TA4 180 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 BAGE2Q86Y30 109 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 OR4F17Q8NGA8 305 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 TSKUQ8WUA8 353 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 MRPL53Q96EL3 112 aaKnown RBP7.76□□□□□ -1.17
RAB5B-206ENST00000549505 FAM103A1Q9BTL3 118 aaKnown RBP7.76□□□□□ -1.17
RAB5B-206ENST00000549505 ERVFC1-1P60608 527 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 LINC01356Q8N9X3 169 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 CCDC140Q96MF4 163 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 NDUFAF3Q9BU61 184 aa7.76□□□□□ -1.17
RAB5B-206ENST00000549505 ICE1Q9Y2F5 2266 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 ZNF785A8K8V0 405 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 CLEC12BQ2HXU8 276 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 CLPSL1A2RUU4 121 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 RBAKDNA6NC62 111 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 IGLV1-40P01703 118 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 IL4P05112 153 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 SLC25A5P05141 298 aaKnown RBP7.75□□□□□ -1.17
RAB5B-206ENST00000549505 RPL7P18124 248 aaKnown RBP7.75□□□□□ -1.17
RAB5B-206ENST00000549505 RAB4AP20338 218 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 TMEM136Q6ZRR5 245 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 NUDT10Q8NFP7 164 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 EEF1AKMT3Q96AZ1 226 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 NUDT11Q96G61 164 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 HIVEP3Q5T1R4 2406 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 PCNX1Q96RV3 2341 aa7.75□□□□□ -1.17
RAB5B-206ENST00000549505 OR2J3O76001 311 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 APELAP0DMC3 54 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 COX6B1P14854 86 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 RANP62826 216 aaKnown RBP7.74□□□□□ -1.17
RAB5B-206ENST00000549505 Q6ZVH6 145 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 ERASQ7Z444 233 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 USMG5Q96IX5 58 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 TRAPPC1Q9Y5R8 145 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 IGHV3-21A0A0B4J1V1 117 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 DIRC3C9JPN6 131 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 BMPR1BO00238 502 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 UNQ5815/PRO19632Q6UWF5 114 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 CLEC5AQ9NY25 188 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 RABAC1Q9UI14 185 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 SMAD5-AS1Q9Y6J3 95 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 SLC17A3O00476 420 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 PSG3Q16557 428 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 LINC00479Q96M42 142 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 HIST1H2BLQ99880 126 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 VPS25Q9BRG1 176 aa7.74□□□□□ -1.17
RAB5B-206ENST00000549505 RNASE7Q9H1E1 156 aaKnown RBP7.74□□□□□ -1.17
RAB5B-206ENST00000549505 AURKAIP1Q9NWT8 199 aaPredicted RBP7.74□□□□□ -1.17
RAB5B-206ENST00000549505 PIEZO1Q92508 2521 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms