RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 IGHV3OR15-7A0A075B7D8 119 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 E7EUB6 86 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 RHODO00212 210 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 MYOD1P15172 320 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 TFPI2P48307 235 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 PEA15Q15121 130 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 KCNIP4Q6PIL6 250 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 RBMS3Q6XE24 437 aaKnown RBP3.66□□□□□ -1.82
SCAF11-212ENST00000549162 ADAMTSL5Q6ZMM2 481 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 PDZD9Q8IXQ8 264 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 OR51G1Q8NGK1 321 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 RITA1Q96K30 269 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 LINC00477Q96M19 166 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 ZNF331Q9NQX6 463 aaPredicted RBP3.66□□□□□ -1.82
SCAF11-212ENST00000549162 IFNA1P01562 189 aa3.65□□□□□ -1.82
SCAF11-212ENST00000549162 REG1BP48304 166 aa3.65□□□□□ -1.82
SCAF11-212ENST00000549162 RAB31Q13636 194 aa3.65□□□□□ -1.82
SCAF11-212ENST00000549162 COMMD2Q86X83 199 aa3.65□□□□□ -1.82
SCAF11-212ENST00000549162 KNTC1P50748 2209 aa3.65□□□□□ -1.82
SCAF11-212ENST00000549162 DMDP11532 3685 aa3.65□□□□□ -1.82
SCAF11-212ENST00000549162 TCTEX1D4Q5JR98 221 aa3.65□□□□□ -1.82
SCAF11-212ENST00000549162 C5orf17Q8NAS9 161 aa3.65□□□□□ -1.82
SCAF11-212ENST00000549162 AAMDCQ9H7C9 122 aa3.65□□□□□ -1.82
SCAF11-212ENST00000549162 METTL1Q9UBP6 276 aaKnown RBP3.65□□□□□ -1.82
SCAF11-212ENST00000549162 SMPXQ9UHP9 88 aa3.65□□□□□ -1.82
SCAF11-212ENST00000549162 MYO7BQ6PIF6 2116 aa3.65□□□□□ -1.83
SCAF11-212ENST00000549162 A0A1W2PS18 150 aa3.65□□□□□ -1.83
SCAF11-212ENST00000549162 DNAJC9-AS1A6NH13 148 aa3.65□□□□□ -1.83
SCAF11-212ENST00000549162 ATP5J2P56134 94 aa3.65□□□□□ -1.83
SCAF11-212ENST00000549162 OR5D18Q8NGL1 313 aa3.65□□□□□ -1.83
SCAF11-212ENST00000549162 OR4F5Q8NH21 305 aa3.65□□□□□ -1.83
SCAF11-212ENST00000549162 TMEM37Q8WXS4 190 aa3.65□□□□□ -1.83
SCAF11-212ENST00000549162 CYYR1Q96J86 154 aa3.65□□□□□ -1.83
SCAF11-212ENST00000549162 HSPB9Q9BQS6 159 aa3.65□□□□□ -1.83
SCAF11-212ENST00000549162 TTTY10Q9BZA0 68 aa3.65□□□□□ -1.83
SCAF11-212ENST00000549162 RFNGQ9Y644 331 aa3.65□□□□□ -1.83
SCAF11-212ENST00000549162 PFN1P07737 140 aaKnown RBP3.64□□□□□ -1.83
SCAF11-212ENST00000549162 ADCYAP1P18509 176 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 GCHFRP30047 84 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 G6PCP35575 357 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 MMDQ15546 238 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 FOXI2Q6ZQN5 318 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 Q6ZSV7 163 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 NRGNQ92686 78 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 DUX5Q96PT3 197 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 PIEZO2Q9H5I5 2752 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 TRAV3A0A0B4J244 114 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 CRXO43186 299 aaPredicted RBP3.64□□□□□ -1.83
SCAF11-212ENST00000549162 Q0VG73 95 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 CLINT1Q14677 625 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 LGALS9BQ3B8N2 356 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 KMT2AQ03164 3969 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 IGHV3OR16-10A0A075B7F0 116 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 RPL7P18124 248 aaKnown RBP3.64□□□□□ -1.83
SCAF11-212ENST00000549162 KRTAP10-9P60411 292 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 CACNG7P62955 275 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 SLC35B1P78383 322 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 KLHDC1Q8N7A1 406 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 UBALD1Q8TB05 177 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 TIMM21Q9BVV7 248 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 GNG12Q9UBI6 72 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 USP34Q70CQ2 3546 aa3.64□□□□□ -1.83
SCAF11-212ENST00000549162 TRAV26-2A0A0B4J265 109 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 A0A1W2PPV4 95 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 GAGE12BA1L429 117 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 GAGE12HA6NDE8 117 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 ZNF705FA8MVS1 300 aaPredicted RBP3.63□□□□□ -1.83
SCAF11-212ENST00000549162 ZNF705DP0CH99 300 aaPredicted RBP3.63□□□□□ -1.83
SCAF11-212ENST00000549162 ZNF705BP0CI00 300 aaPredicted RBP3.63□□□□□ -1.83
SCAF11-212ENST00000549162 ZNF705AQ6ZN79 300 aaPredicted RBP3.63□□□□□ -1.83
SCAF11-212ENST00000549162 SPATA12Q7Z6I5 190 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 ZNF664Q8N3J9 261 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 SECTM1Q8WVN6 248 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 SLC25A39Q9BZJ4 359 aaPredicted RBP3.63□□□□□ -1.83
SCAF11-212ENST00000549162 ESM1Q9NQ30 184 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 NAT8Q9UHE5 227 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 UNC80Q8N2C7 3258 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 TMEM213A2RRL7 107 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 RBFOX3A6NFN3 312 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 PCP4L1A6NKN8 68 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 CHEK1O14757 476 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 SSNA1O43805 119 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 RAB4AP20338 218 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 NFYBP25208 207 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 DAZ2Q13117 558 aaKnown RBP3.63□□□□□ -1.83
SCAF11-212ENST00000549162 DEFB112Q30KQ8 113 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 C5orf24Q7Z6I8 188 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 TRPT1Q86TN4 253 aaKnown RBP3.63□□□□□ -1.83
SCAF11-212ENST00000549162 LYG1Q8N1E2 194 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 C21orf62Q9NYP8 219 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 DKK2Q9UBU2 259 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 KIF25-AS1Q9Y6Z4 181 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 ATP6V0E1O15342 81 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 ZNF324O75467 553 aaPredicted RBP3.63□□□□□ -1.83
SCAF11-212ENST00000549162 NCR2O95944 276 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 IFNA5P01569 189 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 MT-ND6P03923 174 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 IGHV4-38-2P0DP08 117 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 OR5I1Q13606 314 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms