RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 TEX45Q8NA69 505 aa11.23□□□□□ -0.61
RAPGEF3-218ENST00000548919 FBXL15Q9H469 300 aa11.23□□□□□ -0.61
RAPGEF3-218ENST00000548919 TEX22C9J3V5 150 aa11.23□□□□□ -0.61
RAPGEF3-218ENST00000548919 APOHP02749 345 aaPredicted RBP11.23□□□□□ -0.61
RAPGEF3-218ENST00000548919 IGLC1P0CG04 106 aa11.23□□□□□ -0.61
RAPGEF3-218ENST00000548919 GFRA4Q9GZZ7 299 aa11.23□□□□□ -0.61
RAPGEF3-218ENST00000548919 F11RQ9Y624 299 aaKnown RBP11.23□□□□□ -0.61
RAPGEF3-218ENST00000548919 SPTBN2O15020 2390 aa11.23□□□□□ -0.61
RAPGEF3-218ENST00000548919 LOC105371242A0A075B767 164 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 NPIPB6E9PJ23 425 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 OVOL3O00110 214 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 NUDT3O95989 172 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 CRYGBP07316 175 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 ARMS2P0C7Q2 107 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 IGFBPL1Q8WX77 278 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 SRSF12Q8WXF0 261 aaKnown RBP11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 RNASE6Q93091 150 aaKnown RBP11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 ZC2HC1AQ96GY0 325 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 ST20Q9HBF5 79 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 SOX21Q9Y651 276 aaPredicted RBP11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 RIF1Q5UIP0 2472 aaKnown RBP11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 LYNX1G3V0Z9 82 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 LYNX1P0DP58 116 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 HTR1DP28221 377 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 FBLN7Q53RD9 439 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 FAM162BQ5T6X4 162 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 PPP1R27Q86WC6 154 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 NDFIP1Q9BT67 221 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 TPPP3Q9BW30 176 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 DYNLRB1Q9NP97 96 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 ASH1LQ9NR48 2969 aaKnown RBP11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 OTORQ9NRC9 128 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 INSIG2Q9Y5U4 225 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 COX7A1P24310 79 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 PLP1P60201 277 aa11.22□□□□□ -0.61
RAPGEF3-218ENST00000548919 IGHV1-3A0A0C4DH29 117 aa11.21□□□□□ -0.61
RAPGEF3-218ENST00000548919 S4R3C0 116 aa11.21□□□□□ -0.61
RAPGEF3-218ENST00000548919 ZNF318Q5VUA4 2279 aa11.21□□□□□ -0.62
RAPGEF3-218ENST00000548919 HAX1O00165 279 aa11.21□□□□□ -0.62
RAPGEF3-218ENST00000548919 LIPFP07098 398 aa11.21□□□□□ -0.62
RAPGEF3-218ENST00000548919 FOXE3Q13461 319 aa11.21□□□□□ -0.62
RAPGEF3-218ENST00000548919 VAMP3Q15836 100 aa11.21□□□□□ -0.62
RAPGEF3-218ENST00000548919 RASL11BQ9BPW5 248 aa11.21□□□□□ -0.62
RAPGEF3-218ENST00000548919 MAP1LC3CQ9BXW4 147 aa11.21□□□□□ -0.62
RAPGEF3-218ENST00000548919 TMEM191AQ9H0A3 160 aa11.21□□□□□ -0.62
RAPGEF3-218ENST00000548919 MUC21A0A0G2JKD1 596 aa11.2□□□□□ -0.62
RAPGEF3-218ENST00000548919 MUC21A0A140T8X8 626 aa11.2□□□□□ -0.62
RAPGEF3-218ENST00000548919 MUC21Q5SSG8 566 aa11.2□□□□□ -0.62
RAPGEF3-218ENST00000548919 SLC25A34Q6PIV7 304 aa11.2□□□□□ -0.62
RAPGEF3-218ENST00000548919 ASCL5Q7RTU5 278 aa11.2□□□□□ -0.62
RAPGEF3-218ENST00000548919 I3L2K1 104 aa11.2□□□□□ -0.62
RAPGEF3-218ENST00000548919 IGKV1-17P01599 117 aa11.2□□□□□ -0.62
RAPGEF3-218ENST00000548919 C1RLQ9NZP8 487 aa11.2□□□□□ -0.62
RAPGEF3-218ENST00000548919 ZFHX2Q9C0A1 2572 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF3-218ENST00000548919 IGHV2-70DA0A0C4DH43 119 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 SNAI2O43623 268 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 IGLV1-47P01700 117 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 RBX1P62877 108 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 PLGLAQ15195 96 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 BVES-AS1Q5T3Y7 98 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 OR4C5Q8NGB2 326 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 NEU4Q8WWR8 484 aaPredicted RBP11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 A0A087X0K7 114 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 A0A1B0GUT8 65 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 HSBP1L1C9JCN9 74 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 E7EQL1 145 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 BUB1B-PAK6H3BSN5 160 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 FAM106CPP0CH98 169 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 FAM106AQ4KMX7 169 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 BCL6BQ8N143 479 aaPredicted RBP11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 SCRT2Q9NQ03 307 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 ARHGAP32A7KAX9 2087 aa11.19□□□□□ -0.62
RAPGEF3-218ENST00000548919 A0A1W2PRD5 423 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 A0A1W2PRF3 423 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 A0A1W2PRM7 423 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 FAM231BA6NCW3 169 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 OR2T8A6NH00 312 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 CBY3A6NI87 242 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 TAX1BP3O14907 124 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 KLK10O43240 276 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 NGBQ9NPG2 151 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 KAAG1Q9UBP8 84 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 M0R3E3 92 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 NCR2O95944 276 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 OR5AL1P0C617 328 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 HOXB4P17483 251 aaPredicted RBP11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 CRIP1P50238 77 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 TMEM14CQ9P0S9 112 aa11.18□□□□□ -0.62
RAPGEF3-218ENST00000548919 TRBV19A0A075B6N1 114 aa11.17□□□□□ -0.62
RAPGEF3-218ENST00000548919 PRRG2O14669 202 aa11.17□□□□□ -0.62
RAPGEF3-218ENST00000548919 KLF17Q5JT82 389 aaPredicted RBP11.17□□□□□ -0.62
RAPGEF3-218ENST00000548919 C16orf54Q6UWD8 224 aa11.17□□□□□ -0.62
RAPGEF3-218ENST00000548919 SHISA9B4DS77 424 aa11.17□□□□□ -0.62
RAPGEF3-218ENST00000548919 CNIH1O95406 144 aa11.17□□□□□ -0.62
RAPGEF3-218ENST00000548919 RBPJQ06330 500 aa11.17□□□□□ -0.62
RAPGEF3-218ENST00000548919 C8orf49Q96NF6 230 aa11.17□□□□□ -0.62
RAPGEF3-218ENST00000548919 TMSB15BA0A087X1C1 80 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 PET117Q6UWS5 81 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 RPEQ96AT9 228 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms