RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 A0A1B0GWJ7 208 aa11.4□□□□□ -0.58
CACNB3-209ENST00000548860 NPIPB5A8MRT5 1133 aa11.4□□□□□ -0.58
CACNB3-209ENST00000548860 NDUFS7O75251 213 aa11.4□□□□□ -0.58
CACNB3-209ENST00000548860 LINC00173Q6ZV60 143 aa11.4□□□□□ -0.58
CACNB3-209ENST00000548860 WFDC12Q8WWY7 111 aa11.4□□□□□ -0.58
CACNB3-209ENST00000548860 MRPL32Q9BYC8 188 aaKnown RBP11.4□□□□□ -0.58
CACNB3-209ENST00000548860 NDUFA4L2Q9NRX3 87 aa11.4□□□□□ -0.58
CACNB3-209ENST00000548860 ZNF329Q86UD4 541 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 C1orf174Q8IYL3 243 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 PRSS33Q8NF86 280 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 STXBP6Q8NFX7 210 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 ZNF503Q96F45 646 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 ZC2HC1AQ96GY0 325 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 GRAMD2BQ96HH9 432 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 TMEM208Q9BTX3 173 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 APOBEC3AP31941 199 aaPredicted RBP11.39□□□□□ -0.59
CACNB3-209ENST00000548860 GPR183P32249 361 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 VWC2Q2TAL6 325 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 PATE2Q6UY27 113 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 RAB1BQ9H0U4 201 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 LOXP28300 417 aaPredicted RBP11.39□□□□□ -0.59
CACNB3-209ENST00000548860 LGALS7P47929 136 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 LY6EQ16553 131 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 OR4A5Q8NH83 315 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 C18orf32Q8TCD1 76 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 DDB2Q92466 427 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 PCSK5Q92824 1860 aa11.39□□□□□ -0.59
CACNB3-209ENST00000548860 TYMSP04818 313 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 TEX45Q8NA69 505 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 TMEM191AQ9H0A3 160 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 IGHV1-3A0A0C4DH29 117 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 C9JCJ5 164 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 HTN1P15515 57 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 TDGF1P3P51864 188 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 SCGB2A2Q13296 93 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 TMEM70Q9BUB7 260 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 RUSC1-AS1Q66K80 236 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 Q8N7P7 452 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 TMEM189A5PLL7 270 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 SPRY2O43597 315 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 SPACA3Q8IXA5 215 aa11.38□□□□□ -0.59
CACNB3-209ENST00000548860 MEF2CQ06413 473 aaPredicted RBP11.37□□□□□ -0.59
CACNB3-209ENST00000548860 LY6DQ14210 128 aa11.37□□□□□ -0.59
CACNB3-209ENST00000548860 ZNF672Q499Z4 452 aaPredicted RBP11.37□□□□□ -0.59
CACNB3-209ENST00000548860 ASCL5Q7RTU5 278 aa11.37□□□□□ -0.59
CACNB3-209ENST00000548860 TMEM167AQ8TBQ9 72 aa11.37□□□□□ -0.59
CACNB3-209ENST00000548860 RNASEH2CQ8TDP1 164 aaKnown RBP11.37□□□□□ -0.59
CACNB3-209ENST00000548860 C2orf88Q9BSF0 95 aa11.37□□□□□ -0.59
CACNB3-209ENST00000548860 SIGLEC9Q9Y336 463 aa11.37□□□□□ -0.59
CACNB3-209ENST00000548860 EVI2AP22794 236 aa11.37□□□□□ -0.59
CACNB3-209ENST00000548860 CKS2P33552 79 aa11.37□□□□□ -0.59
CACNB3-209ENST00000548860 S100A7AQ86SG5 101 aa11.37□□□□□ -0.59
CACNB3-209ENST00000548860 C1orf159Q96HA4 380 aa11.37□□□□□ -0.59
CACNB3-209ENST00000548860 LHBP01229 141 aa11.37□□□□□ -0.59
CACNB3-209ENST00000548860 EIF4EBP1Q13541 118 aaPredicted RBP11.37□□□□□ -0.59
CACNB3-209ENST00000548860 SLC25A39Q9BZJ4 359 aaPredicted RBP11.37□□□□□ -0.59
CACNB3-209ENST00000548860 C22orf46C9J442 243 aa11.36□□□□□ -0.59
CACNB3-209ENST00000548860 TCRAP04437 139 aa11.36□□□□□ -0.59
CACNB3-209ENST00000548860 S100A4P26447 101 aaKnown RBP11.36□□□□□ -0.59
CACNB3-209ENST00000548860 TMEM75Q8N9X5 138 aa11.36□□□□□ -0.59
CACNB3-209ENST00000548860 RAXQ9Y2V3 346 aa11.36□□□□□ -0.59
CACNB3-209ENST00000548860 LRBAP50851 2863 aa11.36□□□□□ -0.59
CACNB3-209ENST00000548860 FAM90A9PA6NNJ1 464 aa11.36□□□□□ -0.59
CACNB3-209ENST00000548860 M0QZK8 103 aa11.36□□□□□ -0.59
CACNB3-209ENST00000548860 ARMS2P0C7Q2 107 aa11.36□□□□□ -0.59
CACNB3-209ENST00000548860 COMPP49747 757 aaPredicted RBP11.36□□□□□ -0.59
CACNB3-209ENST00000548860 YPEL3P61236 119 aaPredicted RBP11.36□□□□□ -0.59
CACNB3-209ENST00000548860 RIGQ13278 110 aa11.36□□□□□ -0.59
CACNB3-209ENST00000548860 TMEM219Q86XT9 240 aa11.36□□□□□ -0.59
CACNB3-209ENST00000548860 TPTE2P1Q5T6R2 138 aa11.36□□□□□ -0.59
CACNB3-209ENST00000548860 AP5S1Q9NUS5 200 aa11.36□□□□□ -0.59
CACNB3-209ENST00000548860 TP53TG3Q9ULZ0 132 aa11.36□□□□□ -0.59
CACNB3-209ENST00000548860 LOC105371242A0A075B767 164 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 A0A087X0K7 114 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 LIPFP07098 398 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 CEACAM3P40198 252 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 C19orf24Q9BVV8 132 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 LRRK2Q5S007 2527 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 ZNF292O60281 2723 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 FAM181BA6NEQ2 426 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 HLA-DRB1P01911 266 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 HLA-DMBP28068 263 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 MPV17L2Q567V2 206 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 Q71RC1 249 aaPredicted RBP11.35□□□□□ -0.59
CACNB3-209ENST00000548860 STPG4Q8N801 248 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 OR5AN1Q8NGI8 311 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 GLMPQ8WWB7 406 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 DPM3Q9P2X0 92 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 RELNP78509 3460 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 IGKV3-20P01619 116 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 RNF125Q96EQ8 232 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 NDFIP1Q9BT67 221 aa11.35□□□□□ -0.59
CACNB3-209ENST00000548860 IGHV3-11P01762 117 aa11.34□□□□□ -0.59
CACNB3-209ENST00000548860 THBDP07204 575 aa11.34□□□□□ -0.59
CACNB3-209ENST00000548860 CFHR2P36980 270 aa11.34□□□□□ -0.59
CACNB3-209ENST00000548860 PPP1R14DQ9NXH3 145 aa11.34□□□□□ -0.59
CACNB3-209ENST00000548860 TRBV9A0A0B4J1U6 114 aa11.34□□□□□ -0.59
CACNB3-209ENST00000548860 A0A1B0GUT8 65 aa11.34□□□□□ -0.59
CACNB3-209ENST00000548860 CLEC2AQ6UVW9 174 aa11.34□□□□□ -0.59
CACNB3-209ENST00000548860 FXYD5Q96DB9 178 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms