RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 FXYD7P58549 80 aa11.51□□□□□ -0.57
DDX54-205ENST00000548786 MORN3Q6PF18 240 aaPredicted RBP11.51□□□□□ -0.57
DDX54-205ENST00000548786 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.51□□□□□ -0.57
DDX54-205ENST00000548786 PATE2Q6UY27 113 aa11.51□□□□□ -0.57
DDX54-205ENST00000548786 STX12Q86Y82 276 aa11.51□□□□□ -0.57
DDX54-205ENST00000548786 TMEM252Q8N6L7 170 aa11.51□□□□□ -0.57
DDX54-205ENST00000548786 C17orf77Q96MU5 243 aa11.51□□□□□ -0.57
DDX54-205ENST00000548786 GGACTQ9BVM4 153 aa11.51□□□□□ -0.57
DDX54-205ENST00000548786 UQCC1Q9NVA1 299 aa11.51□□□□□ -0.57
DDX54-205ENST00000548786 SACSQ9NZJ4 4579 aa11.5□□□□□ -0.57
DDX54-205ENST00000548786 SNRPCP09234 159 aaKnown RBP11.5□□□□□ -0.57
DDX54-205ENST00000548786 ATF4P18848 351 aaPredicted RBP11.5□□□□□ -0.57
DDX54-205ENST00000548786 CAMLGP49069 296 aa11.5□□□□□ -0.57
DDX54-205ENST00000548786 BAXQ07812 192 aa11.5□□□□□ -0.57
DDX54-205ENST00000548786 OR4B1Q8NGF8 309 aa11.5□□□□□ -0.57
DDX54-205ENST00000548786 ARV1Q9H2C2 271 aa11.5□□□□□ -0.57
DDX54-205ENST00000548786 SEPSECSQ9HD40 501 aaKnown RBP11.5□□□□□ -0.57
DDX54-205ENST00000548786 OR5AC2Q9NZP5 309 aa11.5□□□□□ -0.57
DDX54-205ENST00000548786 XCL2Q9UBD3 114 aa11.5□□□□□ -0.57
DDX54-205ENST00000548786 ISLRO14498 428 aa11.49□□□□□ -0.57
DDX54-205ENST00000548786 COX7A2P2O60397 106 aa11.49□□□□□ -0.57
DDX54-205ENST00000548786 HLA-DRB4P13762 266 aa11.49□□□□□ -0.57
DDX54-205ENST00000548786 S100A7P31151 101 aa11.49□□□□□ -0.57
DDX54-205ENST00000548786 H2BFSP57053 126 aa11.49□□□□□ -0.57
DDX54-205ENST00000548786 MIC13Q5XKP0 118 aa11.49□□□□□ -0.57
DDX54-205ENST00000548786 RNF182Q8N6D2 247 aa11.49□□□□□ -0.57
DDX54-205ENST00000548786 SAV1Q9H4B6 383 aaPredicted RBP11.49□□□□□ -0.57
DDX54-205ENST00000548786 HLA-DRB4X5D2U9 266 aa11.49□□□□□ -0.57
DDX54-205ENST00000548786 RYR2Q92736 4967 aa11.48□□□□□ -0.57
DDX54-205ENST00000548786 FGF7P21781 194 aa11.48□□□□□ -0.57
DDX54-205ENST00000548786 MEOX2P50222 304 aa11.48□□□□□ -0.57
DDX54-205ENST00000548786 PLP1P60201 277 aa11.48□□□□□ -0.57
DDX54-205ENST00000548786 HBG1P69891 147 aa11.48□□□□□ -0.57
DDX54-205ENST00000548786 HBG2P69892 147 aa11.48□□□□□ -0.57
DDX54-205ENST00000548786 RAB31Q13636 194 aa11.48□□□□□ -0.57
DDX54-205ENST00000548786 FOXI2Q6ZQN5 318 aa11.48□□□□□ -0.57
DDX54-205ENST00000548786 LINC00305Q7Z4B0 112 aa11.48□□□□□ -0.57
DDX54-205ENST00000548786 GPR82Q96P67 336 aa11.48□□□□□ -0.57
DDX54-205ENST00000548786 NMES1Q9C002 83 aa11.48□□□□□ -0.57
DDX54-205ENST00000548786 LYSTQ99698 3801 aa11.47□□□□□ -0.57
DDX54-205ENST00000548786 IGHV4-28A0A0C4DH34 117 aa11.47□□□□□ -0.57
DDX54-205ENST00000548786 H0YIZ8 118 aa11.47□□□□□ -0.57
DDX54-205ENST00000548786 H3BTX0 84 aa11.47□□□□□ -0.57
DDX54-205ENST00000548786 RLN2P04090 185 aa11.47□□□□□ -0.57
DDX54-205ENST00000548786 ZNF705DP0CH99 300 aaPredicted RBP11.47□□□□□ -0.57
DDX54-205ENST00000548786 ZNF705BP0CI00 300 aaPredicted RBP11.47□□□□□ -0.57
DDX54-205ENST00000548786 RPL7P18124 248 aaKnown RBP11.47□□□□□ -0.57
DDX54-205ENST00000548786 S100A11P31949 105 aa11.47□□□□□ -0.57
DDX54-205ENST00000548786 NHLH2Q02577 135 aa11.47□□□□□ -0.57
DDX54-205ENST00000548786 FAM78BQ5VT40 261 aa11.47□□□□□ -0.57
DDX54-205ENST00000548786 MORN5Q5VZ52 161 aa11.47□□□□□ -0.57
DDX54-205ENST00000548786 EBLN2Q6P2I7 272 aa11.47□□□□□ -0.57
DDX54-205ENST00000548786 RPRMQ9NS64 109 aa11.47□□□□□ -0.57
DDX54-205ENST00000548786 WDR83OSQ9Y284 106 aa11.47□□□□□ -0.57
DDX54-205ENST00000548786 IGHV3OR16-12A0A075B7B8 117 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 TRAV8-2A0A0B4J237 113 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 E5RGE8 158 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 HLA-DMBP28068 263 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 NANOS2P60321 138 aaKnown RBP11.46□□□□□ -0.57
DDX54-205ENST00000548786 NUTF2P61970 127 aaKnown RBP11.46□□□□□ -0.57
DDX54-205ENST00000548786 CLINT1Q14677 625 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 VWC2Q2TAL6 325 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 TMEM41BQ5BJD5 291 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 C10orf113Q5VZT2 155 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 CSNK1G2-AS1Q8NCQ2 148 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 THAP6Q8TBB0 222 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 LRRC20Q8TCA0 184 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 PPP1R1CQ8WVI7 109 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 TMEM37Q8WXS4 190 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 SLC35B3Q9H1N7 401 aa11.46□□□□□ -0.57
DDX54-205ENST00000548786 ALMS1Q8TCU4 4167 aa11.45□□□□□ -0.58
DDX54-205ENST00000548786 A0A0J9YX75 114 aa11.45□□□□□ -0.58
DDX54-205ENST00000548786 SAMD13Q5VXD3 122 aa11.45□□□□□ -0.58
DDX54-205ENST00000548786 S100A7AQ86SG5 101 aa11.45□□□□□ -0.58
DDX54-205ENST00000548786 Q8NAQ8 132 aa11.45□□□□□ -0.58
DDX54-205ENST00000548786 ZNF738Q8NE65 137 aa11.45□□□□□ -0.58
DDX54-205ENST00000548786 OR5C1Q8NGR4 320 aa11.45□□□□□ -0.58
DDX54-205ENST00000548786 C11orf68Q9H3H3 251 aaKnown RBP11.45□□□□□ -0.58
DDX54-205ENST00000548786 ALG5Q9Y673 324 aa11.45□□□□□ -0.58
DDX54-205ENST00000548786 X6R8D5 127 aa11.45□□□□□ -0.58
DDX54-205ENST00000548786 PLECQ15149 4684 aaKnown RBP11.45□□□□□ -0.58
DDX54-205ENST00000548786 TRAV5A0A0B4J249 113 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 LCE6AA0A183 80 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 RBMY1A1P0DJD3 496 aaKnown RBP11.44□□□□□ -0.58
DDX54-205ENST00000548786 RBMY1CP0DJD4 496 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 B2MP61769 119 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 CYCSP99999 105 aaKnown RBP11.44□□□□□ -0.58
DDX54-205ENST00000548786 OPCMLQ14982 345 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 RBMY1FQ15415 496 aaKnown RBP11.44□□□□□ -0.58
DDX54-205ENST00000548786 PXDC1Q5TGL8 231 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 Q6ZRG5 221 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 ZNF709Q8N972 641 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 C1QTNF4Q9BXJ3 329 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 SLC25A31Q9H0C2 315 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 DNAJC4Q9NNZ3 241 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 SLC39A9Q9NUM3 307 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 PXMP4Q9Y6I8 212 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 DNAH1Q9P2D7 4330 aa11.44□□□□□ -0.58
DDX54-205ENST00000548786 PRR20EP86478 221 aa11.43□□□□□ -0.58
DDX54-205ENST00000548786 PRR20CP86479 221 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms