RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 SSR2P43308 183 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 RHOGP84095 191 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 CD200R1LQ6Q8B3 271 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 LRRC25Q8N386 305 aaPredicted RBP0.37□□□□□ -2.35
CCDC38-206ENST00000548771 Q8N6K4 173 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 SFT2D1Q8WV19 159 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 AMELYQ99218 206 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 MIXL1Q9H2W2 232 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 TAS2R4Q9NYW5 299 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 TP73-AS1Q9UF72 201 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 HIVEP1P15822 2718 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 KNDC1Q76NI1 1749 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 UBR1Q8IWV7 1749 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 LRRIQ1Q96JM4 1722 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 CEP295Q9C0D2 2601 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 LRRK2Q5S007 2527 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 ABCC3O15438 1527 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 SLIT1O75093 1534 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 ERICH3Q5RHP9 1530 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 TENM2Q9NT68 2774 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 PTPRZ1P23471 2315 aaPredicted RBP0.37□□□□□ -2.35
CCDC38-206ENST00000548771 TECPR2O15040 1411 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 KDM6AO15550 1401 aaPredicted RBP0.37□□□□□ -2.35
CCDC38-206ENST00000548771 MIA2Q96PC5 1412 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 ADGRL3Q9HAR2 1447 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 CNTLNQ9NXG0 1405 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 STAB1Q9NY15 2570 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 RGPD3A6NKT7 1758 aaPredicted RBP0.37□□□□□ -2.35
CCDC38-206ENST00000548771 RGPD4Q7Z3J3 1758 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 CCDC168Q8NDH2 2452 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 KIF1AQ12756 1690 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 TNRC6CQ9HCJ0 1690 aaKnown RBP0.37□□□□□ -2.35
CCDC38-206ENST00000548771 CACNA1HO95180 2353 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 NEBP20929 6669 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 ANK3Q12955 4377 aaKnown RBP0.36□□□□□ -2.35
CCDC38-206ENST00000548771 MTORP42345 2549 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 SBF2Q86WG5 1849 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 NKTRP30414 1462 aaKnown RBP0.36□□□□□ -2.35
CCDC38-206ENST00000548771 GOLGA3Q08378 1498 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 C1orf167Q5SNV9 1468 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 ITSN1Q15811 1721 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 TOGARAM1Q9Y4F4 1720 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 TACC2O95359 2948 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 DCHS2Q6V1P9 2916 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 KIAA0100Q14667 2235 aaKnown RBP0.36□□□□□ -2.35
CCDC38-206ENST00000548771 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 TCL1BO95988 128 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 HLA-DRB1P01911 266 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 OR5G3P0C626 314 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 COX6A1P12074 109 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 CNBPP62633 177 aaKnown RBP0.36□□□□□ -2.35
CCDC38-206ENST00000548771 TPM4P67936 248 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 LPCAT3Q6P1A2 487 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 TEX261Q6UWH6 196 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 TERB2Q8NHR7 220 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 H1FXQ92522 213 aaKnown RBP0.36□□□□□ -2.35
CCDC38-206ENST00000548771 BORCS5Q969J3 196 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 C11orf68Q9H3H3 251 aaKnown RBP0.36□□□□□ -2.35
CCDC38-206ENST00000548771 PRTFDC1Q9NRG1 225 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 FBXL12Q9NXK8 326 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 RASL12Q9NYN1 266 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 NKIRAS1Q9NYS0 192 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 U3KQ87 197 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 ARHGAP5Q13017 1502 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 NEXMIFQ5QGS0 1516 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 UGGT2Q9NYU1 1516 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 RBBP6Q7Z6E9 1792 aaKnown RBP0.36□□□□□ -2.35
CCDC38-206ENST00000548771 N4BP2Q86UW6 1770 aaPredicted RBP0.36□□□□□ -2.35
CCDC38-206ENST00000548771 CLIP1P30622 1438 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 WRNQ14191 1432 aaPredicted RBP eCLIP0.36□□□□□ -2.35
CCDC38-206ENST00000548771 RIC1Q4ADV7 1423 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 TOPAZ1Q8N9V7 1692 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 ALPK3Q96L96 1907 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 NSD1Q96L73 2696 aaPredicted RBP0.36□□□□□ -2.35
CCDC38-206ENST00000548771 PKHD1P08F94 4074 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 USP9YO00507 2555 aaPredicted RBP0.36□□□□□ -2.35
CCDC38-206ENST00000548771 KIF13BQ9NQT8 1826 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 SSC5DA1L4H1 1573 aa0.36□□□□□ -2.35
CCDC38-206ENST00000548771 NALCNQ8IZF0 1738 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 NLRP1Q9C000 1473 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 MBD5Q9P267 1494 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 MLH3Q9UHC1 1453 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 FAM186AA6NE01 2351 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 SBF1O95248 1867 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 TMEM2Q9UHN6 1383 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 SPTA1P02549 2419 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 HIVEP3Q5T1R4 2406 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 DNAH7Q8WXX0 4024 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 TRPM2O94759 1503 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 PCNX1Q96RV3 2341 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 TRAV9-1A0A075B6T8 112 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 DPRXA6NFQ7 191 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 KCNK1O00180 336 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 PSMD12O00232 456 aaPredicted RBP0.35□□□□□ -2.35
CCDC38-206ENST00000548771 INE1O15225 51 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 OR2B3O76000 313 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 PROSCO94903 275 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 IFNA10P01566 189 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 CALB1P05937 261 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 ZNF25P17030 456 aaPredicted RBP0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms