RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 GGNBP1Q5YKI7 109 aa8.43□□□□□ -1.06
TRAFD1-205ENST00000548277 IGFL4Q6B9Z1 124 aa8.43□□□□□ -1.06
TRAFD1-205ENST00000548277 CIB3Q96Q77 187 aaPredicted RBP8.43□□□□□ -1.06
TRAFD1-205ENST00000548277 TRGV9Q99603 122 aa8.43□□□□□ -1.06
TRAFD1-205ENST00000548277 SRRQ9GZT4 340 aa8.43□□□□□ -1.06
TRAFD1-205ENST00000548277 SLC25A22Q9H936 323 aa8.43□□□□□ -1.06
TRAFD1-205ENST00000548277 IGKV1OR2-108A0A075B7D4 117 aa8.42□□□□□ -1.06
TRAFD1-205ENST00000548277 F5H768 121 aa8.42□□□□□ -1.06
TRAFD1-205ENST00000548277 M0R2Z0 102 aa8.42□□□□□ -1.06
TRAFD1-205ENST00000548277 RPP30P78346 268 aaKnown RBP8.42□□□□□ -1.06
TRAFD1-205ENST00000548277 BAK1Q16611 211 aa8.42□□□□□ -1.06
TRAFD1-205ENST00000548277 SPINK13Q1W4C9 94 aa8.42□□□□□ -1.06
TRAFD1-205ENST00000548277 SPANXN5Q5MJ07 72 aa8.42□□□□□ -1.06
TRAFD1-205ENST00000548277 THAP8Q8NA92 274 aa8.42□□□□□ -1.06
TRAFD1-205ENST00000548277 RSG1Q9BU20 258 aa8.42□□□□□ -1.06
TRAFD1-205ENST00000548277 RPRMQ9NS64 109 aa8.42□□□□□ -1.06
TRAFD1-205ENST00000548277 LINC00854A0A1B0GVQ3 168 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 C9orf170A2RU37 121 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 PRSS46E5RG02 174 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 ZNF701M0R085 212 aaPredicted RBP8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 ADAP1O75689 374 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 HTN1P15515 57 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 PAX9P55771 341 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 UBE2MP61081 183 aaKnown RBP8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 FGL1Q08830 312 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 C1orf194Q5T5A4 169 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 TRIQKQ629K1 86 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 C6orf223Q8N319 242 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 C15orf53Q8NAA6 179 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 CLUHP3Q96NS8 147 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 DOK5Q9P104 306 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 FLVCR2Q9UPI3 526 aa8.41□□□□□ -1.06
TRAFD1-205ENST00000548277 TRAV12-2A0A075B6T6 113 aa8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 NBDYA0A0U1RRE5 68 aa8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 NAP1L6A6NFF2 107 aa8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 H3BP45 60 aa8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 ISLRO14498 428 aa8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 NDUFB6O95139 128 aa8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 AZU1P20160 251 aa8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 GATA2P23769 480 aaPredicted RBP8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 ID3Q02535 119 aa8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 SPATA31B1PQ5VZV4 182 aa8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 RNF182Q8N6D2 247 aa8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 IGF2BP2-AS1Q96M15 143 aa8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 SLC25A32Q9H2D1 315 aa8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 STRAPQ9Y3F4 350 aaKnown RBP8.4□□□□□ -1.06
TRAFD1-205ENST00000548277 HSPG2P98160 4391 aa8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 CFDP00746 253 aaPredicted RBP8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 OR4E1P0C645 316 aa8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 ORM2P19652 201 aa8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 GALR1P47211 349 aa8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 CNN1P51911 297 aaKnown RBP8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 POLR2GP62487 172 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 AKR1C1Q04828 323 aa8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 AMTNQ6UX39 209 aa8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 TMEM182Q6ZP80 229 aaPredicted RBP8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 BAP18Q8IXM2 172 aa8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 BPIFCQ8NFQ6 507 aa8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 ZNRF2Q8NHG8 242 aa8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 SDHCQ99643 169 aaPredicted RBP8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 SLC25A39Q9BZJ4 359 aaPredicted RBP8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 PSENENQ9NZ42 101 aa8.39□□□□□ -1.07
TRAFD1-205ENST00000548277 SMCO3A2RU48 225 aa8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 ZNF98A6NK75 572 aa8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 CRXO43186 299 aaPredicted RBP8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 CDK2AP2O75956 126 aa8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 ANXA7P20073 488 aaKnown RBP8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 DLK1P80370 383 aa8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 ACOT7LQ6ZUV0 252 aa8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 SPATA12Q7Z6I5 190 aa8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 OR11H7Q8NGC8 314 aa8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 C17orf77Q96MU5 243 aa8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 UHRF2Q96PU4 802 aa8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 LINC01587Q99440 93 aa8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 SCRT2Q9NQ03 307 aa8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 LINC00588Q9Y4M8 146 aa8.38□□□□□ -1.07
TRAFD1-205ENST00000548277 LYRM9A8MSI8 78 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 CENPXA8MT69 81 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 SSSCA1O60232 199 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 INSP01308 110 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 BTCP35070 178 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 CCL18P55774 89 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 FAM3BP58499 235 aaPredicted RBP8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 RHOBP62745 196 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 CLINT1Q14677 625 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 C4orf46Q504U0 113 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 TMEM144Q7Z5S9 345 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 OR4D5Q8NGN0 318 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 OR1B1Q8NGR6 318 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 PPP1R14DQ9NXH3 145 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 SLC45A2Q9UMX9 530 aa8.37□□□□□ -1.07
TRAFD1-205ENST00000548277 PMS2P5A8MQ11 134 aa8.36□□□□□ -1.07
TRAFD1-205ENST00000548277 CCNKO75909 580 aa8.36□□□□□ -1.07
TRAFD1-205ENST00000548277 DUSP14O95147 198 aaKnown RBP8.36□□□□□ -1.07
TRAFD1-205ENST00000548277 IL5P05113 134 aa8.36□□□□□ -1.07
TRAFD1-205ENST00000548277 ATP5G1P05496 136 aa8.36□□□□□ -1.07
TRAFD1-205ENST00000548277 IL7P13232 177 aa8.36□□□□□ -1.07
TRAFD1-205ENST00000548277 ATP5G3P48201 142 aa8.36□□□□□ -1.07
TRAFD1-205ENST00000548277 MEOX2P50222 304 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms