RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 FAM74A3Q4VXF1 159 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 TNFAIP8L3Q5GJ75 292 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 RBM48Q5RL73 367 aaKnown RBP1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 SLC25A24Q6NUK1 477 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 SLC35F2Q8IXU6 374 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 VKORC1L1Q8N0U8 176 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 PUSL1Q8N0Z8 303 aaKnown RBP1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 OR51A4Q8NGJ6 313 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 TMEM167AQ8TBQ9 72 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 MARCH1Q8TCQ1 289 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 CPNE2Q96FN4 548 aaPredicted RBP1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 IGF2BP2-AS1Q96M15 143 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 GPER1Q99527 375 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 PAIP2Q9BPZ3 127 aaKnown RBP1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 THTPAQ9BU02 230 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 NXF2Q9GZY0 626 aaKnown RBP1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 SAV1Q9H4B6 383 aaPredicted RBP1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 NOP10Q9NPE3 64 aaKnown RBP1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 CLN6Q9NWW5 311 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 SDHAF2Q9NX18 166 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 LGALS13Q9UHV8 139 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 RPH3ALQ9UNE2 315 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 SAMHD1Q9Y3Z3 626 aaKnown RBP1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 TIMM8BQ9Y5J9 83 aaPredicted RBP1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 ICOSQ9Y6W8 199 aa1.28□□□□□ -2.2
DEPDC4-204ENST00000547823 FLGP20930 4061 aaPredicted RBP1.28□□□□□ -2.21
DEPDC4-204ENST00000547823 A0A1B0GWB2 263 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 H3BN98 237 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 H7C1H1 209 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 TNFRSF11BO00300 401 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 ZNF780AO75290 641 aaPredicted RBP1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 CCNB2O95067 398 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 NPPAP01160 153 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 HMGN1P05114 100 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 HLA-GP17693 338 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 RAB3AP20336 220 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 NPPCP23582 126 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 CRYBB3P26998 211 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 CALRP27797 417 aaKnown RBP1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 RORCP51449 518 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 PSME3P61289 254 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 B2MP61769 119 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 LAGE3Q14657 143 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 GINS1Q14691 196 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 FAM78BQ5VT40 261 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 ZNF880Q6PDB4 577 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 SPINK6Q6UWN8 80 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 FOXI2Q6ZQN5 318 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 IFT20Q8IY31 132 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 MS4A15Q8N5U1 240 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 Q8N976 141 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 GDPD1Q8N9F7 314 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 OR51A2Q8NGJ7 313 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 OR5D14Q8NGL3 314 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 OR2G2Q8NGZ5 317 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 TEX47Q8TBZ9 253 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 BAALCQ8WXS3 180 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 RPUSD4Q96CM3 377 aaKnown RBP1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 ADTRPQ96IZ2 230 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 S100A13Q99584 98 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 TBX5Q99593 518 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 DCUN1D5Q9BTE7 237 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 KRTAP2-1Q9BYU5 128 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 ROPN1BQ9BZX4 212 aaPredicted RBP1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 OR2D2Q9H210 308 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 CMTM6Q9NX76 183 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 RDH8Q9NYR8 311 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 F11RQ9Y624 299 aaKnown RBP1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
DEPDC4-204ENST00000547823 DSTQ03001 7570 aaKnown RBP1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 IGKV2D-24A0A075B6R9 120 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 IGKV1-6A0A0C4DH72 117 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 A0A0G2JRQ6 117 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 ZNF98A6NK75 572 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 OR4C45A6NMZ5 311 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 A8MTW9 85 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 TMEM14DPA8MWL7 114 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 F6UB75 175 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 H3BMQ9 156 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 I3L2K1 104 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 MRASO14807 208 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 CRXO43186 299 aaPredicted RBP1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 SSX5O60225 188 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 PDCD6O75340 191 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 SERPINE2P07093 398 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 OR13C7P0DN81 318 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 SRMP19623 302 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 PTMSP20962 102 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 HTR2CP28335 458 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 CASQ1P31415 396 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 ZNF93P35789 620 aaPredicted RBP1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 ETV6P41212 452 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 EIF2B2P49770 351 aaKnown RBP1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 AP2S1P53680 142 aaPredicted RBP1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 TAS2R60P59551 318 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 HLA-DRB3P79483 266 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 PRR3P79522 188 aaKnown RBP1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 MT1HP80294 61 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 WT1-ASQ06250 92 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 GPR176Q14439 515 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms