RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CA1P00915 261 aaPredicted RBP13.73□□□□□ -0.21
PRPF40B-206ENST00000547764 PSMB3P49720 205 aa13.73□□□□□ -0.21
PRPF40B-206ENST00000547764 BAXQ07812 192 aa13.73□□□□□ -0.21
PRPF40B-206ENST00000547764 S100A7AQ86SG5 101 aa13.73□□□□□ -0.21
PRPF40B-206ENST00000547764 LINC00052Q96N35 136 aa13.73□□□□□ -0.21
PRPF40B-206ENST00000547764 ISLRO14498 428 aa13.72□□□□□ -0.21
PRPF40B-206ENST00000547764 CXCL3P19876 107 aa13.72□□□□□ -0.21
PRPF40B-206ENST00000547764 MEOX2P50222 304 aa13.72□□□□□ -0.21
PRPF40B-206ENST00000547764 PRR20EP86478 221 aa13.72□□□□□ -0.21
PRPF40B-206ENST00000547764 PRR20CP86479 221 aa13.72□□□□□ -0.21
PRPF40B-206ENST00000547764 PRR20DP86480 221 aa13.72□□□□□ -0.21
PRPF40B-206ENST00000547764 PRR20BP86481 221 aa13.72□□□□□ -0.21
PRPF40B-206ENST00000547764 PRR20AP86496 221 aa13.72□□□□□ -0.21
PRPF40B-206ENST00000547764 MIC13Q5XKP0 118 aa13.72□□□□□ -0.21
PRPF40B-206ENST00000547764 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.72□□□□□ -0.21
PRPF40B-206ENST00000547764 OR5C1Q8NGR4 320 aa13.72□□□□□ -0.21
PRPF40B-206ENST00000547764 TMEM37Q8WXS4 190 aa13.72□□□□□ -0.21
PRPF40B-206ENST00000547764 COX7A2P2O60397 106 aa13.71□□□□□ -0.21
PRPF40B-206ENST00000547764 PET100P0DJ07 73 aa13.71□□□□□ -0.21
PRPF40B-206ENST00000547764 RPL7P18124 248 aaKnown RBP13.71□□□□□ -0.21
PRPF40B-206ENST00000547764 FGF7P21781 194 aa13.71□□□□□ -0.21
PRPF40B-206ENST00000547764 DEFB1P60022 68 aa13.71□□□□□ -0.21
PRPF40B-206ENST00000547764 SAMD13Q5VXD3 122 aa13.71□□□□□ -0.21
PRPF40B-206ENST00000547764 Q6ZRG5 221 aa13.71□□□□□ -0.21
PRPF40B-206ENST00000547764 LINC00305Q7Z4B0 112 aa13.71□□□□□ -0.21
PRPF40B-206ENST00000547764 C16orf92Q96LL3 132 aa13.71□□□□□ -0.21
PRPF40B-206ENST00000547764 ELOA3CA0A087WX78 387 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-206ENST00000547764 H3BMM0 161 aa13.7□□□□□ -0.22
PRPF40B-206ENST00000547764 GIG44P09565 113 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-206ENST00000547764 SPP1P10451 314 aa13.7□□□□□ -0.22
PRPF40B-206ENST00000547764 LYL1P12980 280 aa13.7□□□□□ -0.22
PRPF40B-206ENST00000547764 RPL29P47914 159 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-206ENST00000547764 OPCMLQ14982 345 aa13.7□□□□□ -0.22
PRPF40B-206ENST00000547764 MORN3Q6PF18 240 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-206ENST00000547764 GATAD1Q8WUU5 269 aa13.7□□□□□ -0.22
PRPF40B-206ENST00000547764 CHAC2Q8WUX2 184 aa13.7□□□□□ -0.22
PRPF40B-206ENST00000547764 MED28Q9H204 178 aa13.7□□□□□ -0.22
PRPF40B-206ENST00000547764 MPDU1O75352 247 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 HLA-DRB4P13762 266 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 ATF4P18848 351 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 C4BPBP20851 252 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 B2MP61769 119 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 FGL1Q08830 312 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 CLINT1Q14677 625 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 FCN2Q15485 313 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 RGS21Q2M5E4 152 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 GDF5OSQ5U4N7 250 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 C10orf113Q5VZT2 155 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 OR11H7Q8NGC8 314 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 THAP6Q8TBB0 222 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 C20orf173Q96LM9 149 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 DNAJC4Q9NNZ3 241 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 SLC39A9Q9NUM3 307 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 MBD2Q9UBB5 411 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 RNF24Q9Y225 148 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 HLA-DRB4X5D2U9 266 aa13.69□□□□□ -0.22
PRPF40B-206ENST00000547764 MRPS12O15235 138 aaKnown RBP13.68□□□□□ -0.22
PRPF40B-206ENST00000547764 CASC10Q5T4H9 136 aa13.68□□□□□ -0.22
PRPF40B-206ENST00000547764 MORN5Q5VZ52 161 aa13.68□□□□□ -0.22
PRPF40B-206ENST00000547764 FOXI2Q6ZQN5 318 aa13.68□□□□□ -0.22
PRPF40B-206ENST00000547764 NPCDR1Q9BY65 106 aa13.68□□□□□ -0.22
PRPF40B-206ENST00000547764 SAV1Q9H4B6 383 aaPredicted RBP13.68□□□□□ -0.22
PRPF40B-206ENST00000547764 PXMP4Q9Y6I8 212 aa13.68□□□□□ -0.22
PRPF40B-206ENST00000547764 TRAV8-2A0A0B4J237 113 aa13.67□□□□□ -0.22
PRPF40B-206ENST00000547764 A0A0J9YWU9 116 aa13.67□□□□□ -0.22
PRPF40B-206ENST00000547764 RPL12P30050 165 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-206ENST00000547764 TMEM41BQ5BJD5 291 aa13.67□□□□□ -0.22
PRPF40B-206ENST00000547764 IGFL4Q6B9Z1 124 aa13.67□□□□□ -0.22
PRPF40B-206ENST00000547764 ZFAND6Q6FIF0 208 aa13.67□□□□□ -0.22
PRPF40B-206ENST00000547764 OR1L4Q8NGR5 311 aa13.67□□□□□ -0.22
PRPF40B-206ENST00000547764 OR11H2Q8NH07 326 aa13.67□□□□□ -0.22
PRPF40B-206ENST00000547764 RARRES2Q99969 163 aa13.67□□□□□ -0.22
PRPF40B-206ENST00000547764 RPRMQ9NS64 109 aa13.67□□□□□ -0.22
PRPF40B-206ENST00000547764 HSPB11Q9Y547 144 aa13.67□□□□□ -0.22
PRPF40B-206ENST00000547764 A0A087X0K7 114 aa13.66□□□□□ -0.22
PRPF40B-206ENST00000547764 F6UB75 175 aa13.66□□□□□ -0.22
PRPF40B-206ENST00000547764 OXA1LQ15070 435 aa13.66□□□□□ -0.22
PRPF40B-206ENST00000547764 PFDN5Q99471 154 aa13.66□□□□□ -0.22
PRPF40B-206ENST00000547764 KMT2CQ8NEZ4 4911 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-206ENST00000547764 IGKV3-20P01619 116 aa13.65□□□□□ -0.22
PRPF40B-206ENST00000547764 NUTF2P61970 127 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-206ENST00000547764 EBLN2Q6P2I7 272 aa13.65□□□□□ -0.22
PRPF40B-206ENST00000547764 BPIFA4PQ86YQ2 179 aa13.65□□□□□ -0.22
PRPF40B-206ENST00000547764 RNF182Q8N6D2 247 aa13.65□□□□□ -0.22
PRPF40B-206ENST00000547764 ATP5SQ99766 215 aa13.65□□□□□ -0.22
PRPF40B-206ENST00000547764 WDR61Q9GZS3 305 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-206ENST00000547764 CLEC5AQ9NY25 188 aa13.65□□□□□ -0.22
PRPF40B-206ENST00000547764 STARD9Q9P2P6 4700 aa13.64□□□□□ -0.23
PRPF40B-206ENST00000547764 TRAV5A0A0B4J249 113 aa13.64□□□□□ -0.23
PRPF40B-206ENST00000547764 A0A0J9YX75 114 aa13.64□□□□□ -0.23
PRPF40B-206ENST00000547764 SPATA31B1PQ5VZV4 182 aa13.64□□□□□ -0.23
PRPF40B-206ENST00000547764 CSNK1G2-AS1Q8NCQ2 148 aa13.64□□□□□ -0.23
PRPF40B-206ENST00000547764 IL17DQ8TAD2 202 aa13.64□□□□□ -0.23
PRPF40B-206ENST00000547764 SNRPCP09234 159 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-206ENST00000547764 GCSAMLQ5JQS6 135 aa13.63□□□□□ -0.23
PRPF40B-206ENST00000547764 FAM78BQ5VT40 261 aa13.63□□□□□ -0.23
PRPF40B-206ENST00000547764 OR4B1Q8NGF8 309 aa13.63□□□□□ -0.23
PRPF40B-206ENST00000547764 LRRC20Q8TCA0 184 aa13.63□□□□□ -0.23
PRPF40B-206ENST00000547764 CLUHP3Q96NS8 147 aa13.63□□□□□ -0.23
PRPF40B-206ENST00000547764 SMIM3Q9BZL3 60 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms