RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 MFAP4P55083 255 aa10.4□□□□□ -0.74
PTPRB-205ENST00000547715 ERVK-16P61578 105 aa10.4□□□□□ -0.74
PTPRB-205ENST00000547715 CSNK1G2-AS1Q8NCQ2 148 aa10.4□□□□□ -0.74
PTPRB-205ENST00000547715 MISP3Q96FF7 219 aa10.4□□□□□ -0.74
PTPRB-205ENST00000547715 AQP10Q96PS8 301 aa10.4□□□□□ -0.74
PTPRB-205ENST00000547715 PBDC1Q9BVG4 233 aa10.4□□□□□ -0.74
PTPRB-205ENST00000547715 GGACTQ9BVM4 153 aa10.4□□□□□ -0.74
PTPRB-205ENST00000547715 VSIRQ9H7M9 311 aa10.4□□□□□ -0.74
PTPRB-205ENST00000547715 NSG2Q9Y328 171 aa10.4□□□□□ -0.74
PTPRB-205ENST00000547715 OR51B2Q9Y5P1 312 aa10.4□□□□□ -0.74
PTPRB-205ENST00000547715 GNG7O60262 68 aa10.39□□□□□ -0.75
PTPRB-205ENST00000547715 SFTA3P0C7M3 94 aa10.39□□□□□ -0.75
PTPRB-205ENST00000547715 SULT1A2P50226 295 aa10.39□□□□□ -0.75
PTPRB-205ENST00000547715 FXYD4P59646 89 aa10.39□□□□□ -0.75
PTPRB-205ENST00000547715 AADACL3Q5VUY0 350 aa10.39□□□□□ -0.75
PTPRB-205ENST00000547715 TOMM20LQ6UXN7 152 aa10.39□□□□□ -0.75
PTPRB-205ENST00000547715 Q8N1X5 172 aa10.39□□□□□ -0.75
PTPRB-205ENST00000547715 OR51S1Q8NGJ8 323 aa10.39□□□□□ -0.75
PTPRB-205ENST00000547715 OR1P1Q8NH06 330 aa10.39□□□□□ -0.75
PTPRB-205ENST00000547715 PPP1R1CQ8WVI7 109 aa10.39□□□□□ -0.75
PTPRB-205ENST00000547715 TMEM56Q96MV1 263 aa10.39□□□□□ -0.75
PTPRB-205ENST00000547715 TXN2Q99757 166 aa10.39□□□□□ -0.75
PTPRB-205ENST00000547715 LRP1BQ9NZR2 4599 aa10.39□□□□□ -0.75
PTPRB-205ENST00000547715 DMBT1Q9UGM3 2413 aaPredicted RBP10.38□□□□□ -0.75
PTPRB-205ENST00000547715 I3L2K1 104 aa10.38□□□□□ -0.75
PTPRB-205ENST00000547715 ZNF688P0C7X2 276 aa10.38□□□□□ -0.75
PTPRB-205ENST00000547715 DHRS2Q13268 280 aa10.38□□□□□ -0.75
PTPRB-205ENST00000547715 ACTL10Q5JWF8 245 aa10.38□□□□□ -0.75
PTPRB-205ENST00000547715 ZNF818PQ6ZRF7 136 aa10.38□□□□□ -0.75
PTPRB-205ENST00000547715 STXBP6Q8NFX7 210 aa10.38□□□□□ -0.75
PTPRB-205ENST00000547715 TERB2Q8NHR7 220 aa10.38□□□□□ -0.75
PTPRB-205ENST00000547715 LYPD6BQ8NI32 183 aa10.38□□□□□ -0.75
PTPRB-205ENST00000547715 STRAPQ9Y3F4 350 aaKnown RBP10.38□□□□□ -0.75
PTPRB-205ENST00000547715 APOBP04114 4563 aaKnown RBP10.37□□□□□ -0.75
PTPRB-205ENST00000547715 A0A087WWC5 75 aa10.37□□□□□ -0.75
PTPRB-205ENST00000547715 MT-CO2P00403 227 aa10.37□□□□□ -0.75
PTPRB-205ENST00000547715 KRASP01116 189 aa10.37□□□□□ -0.75
PTPRB-205ENST00000547715 PPT1P50897 306 aa10.37□□□□□ -0.75
PTPRB-205ENST00000547715 TNP2Q05952 138 aa10.37□□□□□ -0.75
PTPRB-205ENST00000547715 PRSS54Q6PEW0 395 aa10.37□□□□□ -0.75
PTPRB-205ENST00000547715 PINX1Q96BK5 328 aaKnown RBP10.37□□□□□ -0.75
PTPRB-205ENST00000547715 TMEM231Q9H6L2 316 aa10.37□□□□□ -0.75
PTPRB-205ENST00000547715 SCRT2Q9NQ03 307 aa10.37□□□□□ -0.75
PTPRB-205ENST00000547715 CACFD1Q9UGQ2 172 aa10.37□□□□□ -0.75
PTPRB-205ENST00000547715 PUS1Q9Y606 427 aaKnown RBP eCLIP10.37□□□□□ -0.75
PTPRB-205ENST00000547715 K7EQG2 157 aa10.36□□□□□ -0.75
PTPRB-205ENST00000547715 DLK1P80370 383 aa10.36□□□□□ -0.75
PTPRB-205ENST00000547715 RNASE10Q5GAN6 216 aaKnown RBP10.36□□□□□ -0.75
PTPRB-205ENST00000547715 GRAMD2BQ96HH9 432 aa10.36□□□□□ -0.75
PTPRB-205ENST00000547715 ZFAND3Q9H8U3 227 aa10.36□□□□□ -0.75
PTPRB-205ENST00000547715 RPS10P5Q9NQ39 176 aa10.36□□□□□ -0.75
PTPRB-205ENST00000547715 FAM212BQ9NTI7 297 aaPredicted RBP10.36□□□□□ -0.75
PTPRB-205ENST00000547715 SPART-AS1P0CW21 52 aa10.35□□□□□ -0.75
PTPRB-205ENST00000547715 F2RP25116 425 aa10.35□□□□□ -0.75
PTPRB-205ENST00000547715 G6PCP35575 357 aa10.35□□□□□ -0.75
PTPRB-205ENST00000547715 EMP1P54849 157 aa10.35□□□□□ -0.75
PTPRB-205ENST00000547715 ZFP82Q8N141 532 aa10.35□□□□□ -0.75
PTPRB-205ENST00000547715 MOB3AQ96BX8 217 aa10.35□□□□□ -0.75
PTPRB-205ENST00000547715 FKBP11Q9NYL4 201 aa10.35□□□□□ -0.75
PTPRB-205ENST00000547715 PRNDQ9UKY0 176 aa10.35□□□□□ -0.75
PTPRB-205ENST00000547715 TRAV18A0A075B6X5 111 aa10.34□□□□□ -0.75
PTPRB-205ENST00000547715 NPPCP23582 126 aa10.34□□□□□ -0.75
PTPRB-205ENST00000547715 DDTP30046 118 aa10.34□□□□□ -0.75
PTPRB-205ENST00000547715 LPAR6P43657 344 aa10.34□□□□□ -0.75
PTPRB-205ENST00000547715 FAM210BQ96KR6 192 aa10.34□□□□□ -0.75
PTPRB-205ENST00000547715 C1QTNF4Q9BXJ3 329 aa10.34□□□□□ -0.75
PTPRB-205ENST00000547715 XCL2Q9UBD3 114 aa10.34□□□□□ -0.75
PTPRB-205ENST00000547715 A0A1B0GU03 582 aa10.33□□□□□ -0.76
PTPRB-205ENST00000547715 A0A1W2PS18 150 aa10.33□□□□□ -0.76
PTPRB-205ENST00000547715 C7orf77A4D0Y5 90 aa10.33□□□□□ -0.76
PTPRB-205ENST00000547715 B4DEV8 164 aa10.33□□□□□ -0.76
PTPRB-205ENST00000547715 PPP1R2P9O14990 202 aa10.33□□□□□ -0.76
PTPRB-205ENST00000547715 CD3DP04234 171 aa10.33□□□□□ -0.76
PTPRB-205ENST00000547715 VAMP1P23763 118 aa10.33□□□□□ -0.76
PTPRB-205ENST00000547715 GNRHRP30968 328 aa10.33□□□□□ -0.76
PTPRB-205ENST00000547715 NUTF2P61970 127 aaKnown RBP10.33□□□□□ -0.76
PTPRB-205ENST00000547715 DCANP1Q8TF63 244 aa10.33□□□□□ -0.76
PTPRB-205ENST00000547715 C14orf144Q96I85 54 aa10.33□□□□□ -0.76
PTPRB-205ENST00000547715 RAB40CQ96S21 281 aa10.33□□□□□ -0.76
PTPRB-205ENST00000547715 CYTL1Q9NRR1 136 aa10.33□□□□□ -0.76
PTPRB-205ENST00000547715 BORCS7-ASMTA0A0B4J1R7 106 aa10.32□□□□□ -0.76
PTPRB-205ENST00000547715 SEC11BP0C7V7 166 aa10.32□□□□□ -0.76
PTPRB-205ENST00000547715 PGAM2P15259 253 aa10.32□□□□□ -0.76
PTPRB-205ENST00000547715 HTN3P15516 51 aa10.32□□□□□ -0.76
PTPRB-205ENST00000547715 FGF7P21781 194 aa10.32□□□□□ -0.76
PTPRB-205ENST00000547715 P2RY1P47900 373 aa10.32□□□□□ -0.76
PTPRB-205ENST00000547715 HERV-K104P61576 105 aa10.32□□□□□ -0.76
PTPRB-205ENST00000547715 NHLH2Q02577 135 aa10.32□□□□□ -0.76
PTPRB-205ENST00000547715 PSMG4Q5JS54 123 aa10.32□□□□□ -0.76
PTPRB-205ENST00000547715 HOGA1Q86XE5 327 aa10.32□□□□□ -0.76
PTPRB-205ENST00000547715 ZNF114Q8NC26 417 aa10.32□□□□□ -0.76
PTPRB-205ENST00000547715 NEU1Q99519 415 aa10.32□□□□□ -0.76
PTPRB-205ENST00000547715 SLC35B3Q9H1N7 401 aa10.32□□□□□ -0.76
PTPRB-205ENST00000547715 C5orf51A6NDU8 294 aa10.31□□□□□ -0.76
PTPRB-205ENST00000547715 NDUFS6O75380 124 aaKnown RBP10.31□□□□□ -0.76
PTPRB-205ENST00000547715 PGLYRP1O75594 196 aaPredicted RBP10.31□□□□□ -0.76
PTPRB-205ENST00000547715 SURF2Q15527 256 aaPredicted RBP10.31□□□□□ -0.76
PTPRB-205ENST00000547715 TMEM128Q5BJH2 165 aa10.31□□□□□ -0.76
PTPRB-205ENST00000547715 TMED4Q7Z7H5 227 aa10.31□□□□□ -0.76
PTPRB-205ENST00000547715 ARRDC1Q8N5I2 433 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms