RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 NTF3P20783 257 aa10.03□□□□□ -0.8
SCAF11-209ENST00000547018 MAS1LP35410 378 aa10.03□□□□□ -0.8
SCAF11-209ENST00000547018 LMO4P61968 165 aa10.03□□□□□ -0.8
SCAF11-209ENST00000547018 CCDC144NLQ6NUI1 221 aa10.03□□□□□ -0.8
SCAF11-209ENST00000547018 NOL4LQ96MY1 436 aaPredicted RBP10.03□□□□□ -0.8
SCAF11-209ENST00000547018 EPDR1Q9UM22 224 aa10.03□□□□□ -0.8
SCAF11-209ENST00000547018 IGHV4-30-2A0A087WSY4 118 aa10.03□□□□□ -0.8
SCAF11-209ENST00000547018 AMBPP02760 352 aa10.03□□□□□ -0.8
SCAF11-209ENST00000547018 ATP5IP56385 69 aaPredicted RBP10.03□□□□□ -0.8
SCAF11-209ENST00000547018 DAZAP1Q96EP5 407 aaKnown RBP10.03□□□□□ -0.8
SCAF11-209ENST00000547018 RNF125Q96EQ8 232 aa10.03□□□□□ -0.8
SCAF11-209ENST00000547018 SAMD10Q9BYL1 202 aa10.03□□□□□ -0.8
SCAF11-209ENST00000547018 C21orf62Q9NYP8 219 aa10.03□□□□□ -0.8
SCAF11-209ENST00000547018 V9GYV3 84 aa10.03□□□□□ -0.8
SCAF11-209ENST00000547018 FNDC10F2Z333 226 aa10.02□□□□□ -0.8
SCAF11-209ENST00000547018 M0R1W7 72 aa10.02□□□□□ -0.8
SCAF11-209ENST00000547018 ATP6V0E1O15342 81 aa10.02□□□□□ -0.8
SCAF11-209ENST00000547018 IGHV3-11P01762 117 aa10.02□□□□□ -0.8
SCAF11-209ENST00000547018 SMIM6P0DI80 62 aa10.02□□□□□ -0.8
SCAF11-209ENST00000547018 USF2Q15853 346 aaPredicted RBP10.02□□□□□ -0.8
SCAF11-209ENST00000547018 CLEC19AQ6UXS0 136 aa10.02□□□□□ -0.8
SCAF11-209ENST00000547018 THAP8Q8NA92 274 aa10.02□□□□□ -0.8
SCAF11-209ENST00000547018 C8orf46Q8TAG6 207 aa10.02□□□□□ -0.8
SCAF11-209ENST00000547018 TCEAL7Q9BRU2 100 aa10.02□□□□□ -0.8
SCAF11-209ENST00000547018 CHRDL1Q9BU40 450 aa10.02□□□□□ -0.8
SCAF11-209ENST00000547018 ZNF586Q9NXT0 402 aa10.02□□□□□ -0.8
SCAF11-209ENST00000547018 IGHV2-70DA0A0C4DH43 119 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 CRISP2P16562 243 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 PMCHP20382 165 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 NUDT10Q8NFP7 164 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 NUDT11Q96G61 164 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 TRGV9Q99603 122 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 TXNDC17Q9BRA2 123 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 C19orf24Q9BVV8 132 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 C7orf69Q9H7B7 122 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 ITPR3Q14573 2671 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 ZNF705FA8MVS1 300 aaPredicted RBP10.02□□□□□ -0.81
SCAF11-209ENST00000547018 J3KRW8 73 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 CLEC3BP05452 202 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 ZNF705DP0CH99 300 aaPredicted RBP10.02□□□□□ -0.81
SCAF11-209ENST00000547018 ZNF705BP0CI00 300 aaPredicted RBP10.02□□□□□ -0.81
SCAF11-209ENST00000547018 IGHV4-38-2P0DP08 117 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 HLA-DMBP28068 263 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 C15orf32Q32M92 178 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 BTF3L4Q96K17 158 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 PGLYRP4Q96LB8 373 aa10.02□□□□□ -0.81
SCAF11-209ENST00000547018 BBC3Q96PG8 261 aaPredicted RBP10.02□□□□□ -0.81
SCAF11-209ENST00000547018 FOXA3P55318 350 aaPredicted RBP10.01□□□□□ -0.81
SCAF11-209ENST00000547018 CLEC2AQ6UVW9 174 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 RNF2Q99496 336 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 ZNF331Q9NQX6 463 aaPredicted RBP10.01□□□□□ -0.81
SCAF11-209ENST00000547018 JMJD1CQ15652 2540 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 BRS3P32247 399 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 MFAP4P55083 255 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 RHOGP84095 191 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 LINC00322Q6ZN03 302 aaPredicted RBP10.01□□□□□ -0.81
SCAF11-209ENST00000547018 OR4F17Q8NGA8 305 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 OR5R1Q8NH85 324 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 FANCD2OSQ96PS1 177 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 C2CD3Q4AC94 2353 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 IGHV7-81A0A0B4J1V7 117 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 IGLV2-8P01709 118 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 CRYGCP07315 174 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 IQCJQ1A5X6 159 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 ACTL10Q5JWF8 245 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 ZNF562Q6V9R5 426 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 FAM19A2Q8N3H0 131 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 SIRPDQ9H106 197 aa10.01□□□□□ -0.81
SCAF11-209ENST00000547018 PDLIM4P50479 330 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 TMEM249Q2WGJ8 235 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 TMEM183AQ8IXX5 376 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 C11orf52Q96A22 123 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 DUX5Q96PT3 197 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 HIVEP2P31629 2446 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 CENPVL3A0A0U1RRI6 287 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 HIGD1CA8MV81 97 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 NPFFO15130 113 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 SRIP30626 198 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 RPL11P62913 178 aaKnown RBP10□□□□□ -0.81
SCAF11-209ENST00000547018 FOXL1Q12952 345 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 ZNF491Q8N8L2 437 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 Q8TAT8 98 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 PYGO2Q9BRQ0 406 aa10□□□□□ -0.81
SCAF11-209ENST00000547018 ODF3BA8MYP8 253 aa9.99□□□□□ -0.81
SCAF11-209ENST00000547018 SERF1AO75920 110 aa9.99□□□□□ -0.81
SCAF11-209ENST00000547018 BPIFA4PQ86YQ2 179 aa9.99□□□□□ -0.81
SCAF11-209ENST00000547018 C9JCJ5 164 aa9.99□□□□□ -0.81
SCAF11-209ENST00000547018 M0QZ24 198 aa9.99□□□□□ -0.81
SCAF11-209ENST00000547018 ZNF253O75346 499 aa9.99□□□□□ -0.81
SCAF11-209ENST00000547018 Q8N9W7 124 aa9.99□□□□□ -0.81
SCAF11-209ENST00000547018 NEU1Q99519 415 aa9.99□□□□□ -0.81
SCAF11-209ENST00000547018 IGKV2-40A0A087WW87 121 aaPredicted RBP9.99□□□□□ -0.81
SCAF11-209ENST00000547018 IGKV2D-40P01614 121 aaPredicted RBP9.99□□□□□ -0.81
SCAF11-209ENST00000547018 CDC42EP3Q9UKI2 254 aa9.99□□□□□ -0.81
SCAF11-209ENST00000547018 ZNF785A8K8V0 405 aa9.98□□□□□ -0.81
SCAF11-209ENST00000547018 P01737 135 aa9.98□□□□□ -0.81
SCAF11-209ENST00000547018 HLA-DRB1P01911 266 aa9.98□□□□□ -0.81
SCAF11-209ENST00000547018 TCRAP04437 139 aa9.98□□□□□ -0.81
SCAF11-209ENST00000547018 GP9P14770 177 aa9.98□□□□□ -0.81
SCAF11-209ENST00000547018 FN1P02751 2386 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms