RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 TOLLIPQ9H0E2 274 aa3.48□□□□□ -1.85
NPAS3-204ENST00000546849 BANF2Q9H503 90 aa3.48□□□□□ -1.85
NPAS3-204ENST00000546849 LSM5Q9Y4Y9 91 aaKnown RBP3.48□□□□□ -1.85
NPAS3-204ENST00000546849 FN1P02751 2386 aaKnown RBP3.47□□□□□ -1.85
NPAS3-204ENST00000546849 CABIN1Q9Y6J0 2220 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 KNL1Q8NG31 2342 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 TRAV14DV4A0A0A6YYC5 116 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 CD300LBA8K4G0 201 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 H0Y980 276 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 H3BSH0 61 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 J3QKU1 62 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 M0R036 132 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 MT-CO2P00403 227 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 CFDP00746 253 aaPredicted RBP3.47□□□□□ -1.85
NPAS3-204ENST00000546849 PGA5P0DJD9 388 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 S100A2P29034 98 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 RAB13P51153 203 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 FABP6P51161 128 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 RBM11P57052 281 aaKnown RBP3.47□□□□□ -1.85
NPAS3-204ENST00000546849 TMEM33P57088 247 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 FGF12P61328 243 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 ZNF616Q08AN1 781 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 RAB31Q13636 194 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 CEACAM16Q2WEN9 425 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 LYPD6Q86Y78 171 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 OR5AS1Q8N127 324 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 OR10Z1Q8NGY1 313 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 OR10D3Q8NH80 312 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 CIRBP-AS1Q8TBR5 109 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 LSM10Q969L4 123 aaKnown RBP3.47□□□□□ -1.85
NPAS3-204ENST00000546849 TMEM243Q9BU79 118 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 SLC35B3Q9H1N7 401 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 SLC2A9Q9NRM0 540 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 SPTBP11277 2137 aa3.47□□□□□ -1.85
NPAS3-204ENST00000546849 SPENQ96T58 3664 aaKnown RBP3.47□□□□□ -1.85
NPAS3-204ENST00000546849 CACNA1EQ15878 2313 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 IGHV7-4-1A0A0J9YVY3 117 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 PQLC2LA1A4F0 135 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 OR5H1A6NKK0 313 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 ATP6V1G2-DDX39BF2Z307 99 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 J3QT63 122 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 PITX3O75364 302 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 PPYP01298 95 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 SFTA3P0C7M3 94 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 SMIM6P0DI80 62 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 CRYGSP22914 178 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 AKR1D1P51857 326 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 AKR1C2P52895 323 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 FXYD4P59646 89 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 RAB11AP62491 216 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 ENDOGQ14249 297 aaKnown RBP3.46□□□□□ -1.86
NPAS3-204ENST00000546849 TAF9Q16594 264 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 GUK1Q16774 197 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 KHDC3LQ587J8 217 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 DNLZQ5SXM8 178 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 C10orf91Q5T1B1 145 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 TMEM42Q69YG0 159 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 LYPD1Q8N2G4 141 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 C8orf31Q8N9H6 132 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 WDR31Q8NA23 367 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 TMEM104Q8NE00 496 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 OR13D1Q8NGV5 346 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 OR2AE1Q8NHA4 323 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 MAFIPQ8WZ33 124 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 TMEM56Q96MV1 263 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 LINC00052Q96N35 136 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 GINS3Q9BRX5 216 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 RTBDNQ9BSG5 229 aaPredicted RBP3.46□□□□□ -1.86
NPAS3-204ENST00000546849 PSMG3Q9BT73 122 aaPredicted RBP3.46□□□□□ -1.86
NPAS3-204ENST00000546849 PARD6GQ9BYG4 376 aaPredicted RBP3.46□□□□□ -1.86
NPAS3-204ENST00000546849 REG4Q9BYZ8 158 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 BCL2L14Q9BZR8 327 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 TMEM222Q9H0R3 208 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 C8orf17Q9NRJ1 99 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 C19orf12Q9NSK7 152 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 TMEM242Q9NWH2 141 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 AK3Q9UIJ7 227 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 TRAPPC2LQ9UL33 140 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 TMEM56-RWDD3S4R434 201 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 CEP192Q8TEP8 1941 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 F8P00451 2351 aa3.46□□□□□ -1.86
NPAS3-204ENST00000546849 ASCC3Q8N3C0 2202 aaKnown RBP3.46□□□□□ -1.86
NPAS3-204ENST00000546849 LRBAP50851 2863 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 FLNCQ14315 2725 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 AHCTF1Q8WYP5 2266 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 IGKV1D-17A0A075B6S4 117 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 A0A087WWC5 75 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 IGHV3-49A0A0A0MS15 119 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 A0A0J9YW62 118 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 C5orf49A4QMS7 147 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 G3V3Q6 166 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 SDCBPO00560 298 aaPredicted RBP3.45□□□□□ -1.86
NPAS3-204ENST00000546849 CYB5BO43169 146 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 MPDU1O75352 247 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 OR5AC1P0C628 307 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 CCL3P10147 92 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 CCNOP22674 350 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 SNCAP37840 140 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 PSMB3P49720 205 aa3.45□□□□□ -1.86
NPAS3-204ENST00000546849 SULT1A1P50225 295 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms