RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 C10orf113Q5VZT2 155 aa12.48□□□□□ -0.41
CCDC38-203ENST00000546803 LINC00305Q7Z4B0 112 aa12.48□□□□□ -0.41
CCDC38-203ENST00000546803 INO80EQ8NBZ0 244 aaPredicted RBP12.48□□□□□ -0.41
CCDC38-203ENST00000546803 TMEM37Q8WXS4 190 aa12.48□□□□□ -0.41
CCDC38-203ENST00000546803 UHRF2Q96PU4 802 aa12.48□□□□□ -0.41
CCDC38-203ENST00000546803 CITED4Q96RK1 184 aa12.48□□□□□ -0.41
CCDC38-203ENST00000546803 ASCL2Q99929 193 aa12.48□□□□□ -0.41
CCDC38-203ENST00000546803 PARD6GQ9BYG4 376 aaPredicted RBP12.48□□□□□ -0.41
CCDC38-203ENST00000546803 SMIM3Q9BZL3 60 aa12.48□□□□□ -0.41
CCDC38-203ENST00000546803 LOC102724200A0A096LPH7 203 aaPredicted RBP12.47□□□□□ -0.41
CCDC38-203ENST00000546803 C17orf112F2Z3M2 114 aa12.47□□□□□ -0.41
CCDC38-203ENST00000546803 ID1P41134 155 aa12.47□□□□□ -0.41
CCDC38-203ENST00000546803 HAGHQ16775 308 aa12.47□□□□□ -0.41
CCDC38-203ENST00000546803 LEMD1Q68G75 181 aa12.47□□□□□ -0.41
CCDC38-203ENST00000546803 APRG1Q8IVJ8 170 aa12.47□□□□□ -0.41
CCDC38-203ENST00000546803 FAM24BQ8N5W8 94 aa12.47□□□□□ -0.41
CCDC38-203ENST00000546803 GATAD1Q8WUU5 269 aa12.47□□□□□ -0.41
CCDC38-203ENST00000546803 FXYD6-FXYD2A0A087WZ82 144 aa12.46□□□□□ -0.41
CCDC38-203ENST00000546803 ZNF688P0C7X2 276 aa12.46□□□□□ -0.41
CCDC38-203ENST00000546803 ZNF266Q14584 549 aa12.46□□□□□ -0.41
CCDC38-203ENST00000546803 Q6ZNX1 250 aa12.46□□□□□ -0.41
CCDC38-203ENST00000546803 RSG1Q9BU20 258 aa12.46□□□□□ -0.41
CCDC38-203ENST00000546803 WFDC1Q9HC57 220 aa12.46□□□□□ -0.41
CCDC38-203ENST00000546803 G3V3Q6 166 aa12.45□□□□□ -0.42
CCDC38-203ENST00000546803 PSMB3P49720 205 aa12.45□□□□□ -0.42
CCDC38-203ENST00000546803 TNFSF18Q9UNG2 199 aa12.45□□□□□ -0.42
CCDC38-203ENST00000546803 ISLRO14498 428 aa12.44□□□□□ -0.42
CCDC38-203ENST00000546803 SOCS3O14543 225 aa12.44□□□□□ -0.42
CCDC38-203ENST00000546803 ATF4P18848 351 aaPredicted RBP12.44□□□□□ -0.42
CCDC38-203ENST00000546803 APOC4P55056 127 aa12.44□□□□□ -0.42
CCDC38-203ENST00000546803 PSMG4Q5JS54 123 aa12.44□□□□□ -0.42
CCDC38-203ENST00000546803 BPIFA4PQ86YQ2 179 aa12.44□□□□□ -0.42
CCDC38-203ENST00000546803 TM2D3Q9BRN9 247 aa12.44□□□□□ -0.42
CCDC38-203ENST00000546803 ZMAT4Q9H898 229 aa12.44□□□□□ -0.42
CCDC38-203ENST00000546803 A0A087X0K7 114 aa12.43□□□□□ -0.42
CCDC38-203ENST00000546803 KIR2DL5BA0A0G2JN68 375 aa12.43□□□□□ -0.42
CCDC38-203ENST00000546803 KIR2DL5BA0A0G2JPC4 375 aa12.43□□□□□ -0.42
CCDC38-203ENST00000546803 RNF222A6NCQ9 220 aa12.43□□□□□ -0.42
CCDC38-203ENST00000546803 ZNF124Q15973 351 aa12.43□□□□□ -0.42
CCDC38-203ENST00000546803 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.43□□□□□ -0.42
CCDC38-203ENST00000546803 KIR2DL5AQ8N109 375 aa12.43□□□□□ -0.42
CCDC38-203ENST00000546803 KIR2DL5BQ8NHK3 375 aa12.43□□□□□ -0.42
CCDC38-203ENST00000546803 SPATA25Q9BR10 227 aa12.43□□□□□ -0.42
CCDC38-203ENST00000546803 UBE2CO00762 179 aa12.42□□□□□ -0.42
CCDC38-203ENST00000546803 MRPS12O15235 138 aaKnown RBP12.42□□□□□ -0.42
CCDC38-203ENST00000546803 MORN5Q5VZ52 161 aa12.42□□□□□ -0.42
CCDC38-203ENST00000546803 STHQ8IWL8 128 aa12.42□□□□□ -0.42
CCDC38-203ENST00000546803 C16orf92Q96LL3 132 aa12.42□□□□□ -0.42
CCDC38-203ENST00000546803 C17orf77Q96MU5 243 aa12.42□□□□□ -0.42
CCDC38-203ENST00000546803 TIMM9Q9Y5J7 89 aa12.42□□□□□ -0.42
CCDC38-203ENST00000546803 RPL35AP18077 110 aaKnown RBP12.41□□□□□ -0.42
CCDC38-203ENST00000546803 CXCL2P19875 107 aa12.41□□□□□ -0.42
CCDC38-203ENST00000546803 GCSAMLQ5JQS6 135 aa12.41□□□□□ -0.42
CCDC38-203ENST00000546803 FAM78BQ5VT40 261 aa12.41□□□□□ -0.42
CCDC38-203ENST00000546803 LINC00052Q96N35 136 aa12.41□□□□□ -0.42
CCDC38-203ENST00000546803 U3KQK5 164 aa12.41□□□□□ -0.42
CCDC38-203ENST00000546803 ARPC5O15511 151 aa12.4□□□□□ -0.42
CCDC38-203ENST00000546803 FFAR4Q5NUL3 377 aa12.4□□□□□ -0.42
CCDC38-203ENST00000546803 MRPL32Q9BYC8 188 aaKnown RBP12.4□□□□□ -0.42
CCDC38-203ENST00000546803 BORCS7-ASMTA0A0B4J1R7 106 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 TRAV5A0A0B4J249 113 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 KNCNA6PVL3 124 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 HMSDA8MTL9 139 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 SMLR1H3BR10 107 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 TAAR5O14804 337 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 GUK1Q16774 197 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 ACTL10Q5JWF8 245 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 LCN15Q6UWW0 184 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 Q6ZWC4 215 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 TRPT1Q86TN4 253 aaKnown RBP12.39□□□□□ -0.43
CCDC38-203ENST00000546803 LRRC20Q8TCA0 184 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 MFFQ9GZY8 342 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 CSTL1Q9H114 145 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 HRH4Q9H3N8 390 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 RPRMQ9NS64 109 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 TMEM14CQ9P0S9 112 aa12.39□□□□□ -0.43
CCDC38-203ENST00000546803 PRKDCP78527 4128 aaKnown RBP12.39□□□□□ -0.43
CCDC38-203ENST00000546803 IGLC2P0DOY2 106 aa12.38□□□□□ -0.43
CCDC38-203ENST00000546803 SPATA31B1PQ5VZV4 182 aa12.38□□□□□ -0.43
CCDC38-203ENST00000546803 FOXI2Q6ZQN5 318 aa12.38□□□□□ -0.43
CCDC38-203ENST00000546803 RCHY1Q96PM5 261 aa12.38□□□□□ -0.43
CCDC38-203ENST00000546803 SLC50A1Q9BRV3 221 aa12.38□□□□□ -0.43
CCDC38-203ENST00000546803 PSMG3Q9BT73 122 aaPredicted RBP12.38□□□□□ -0.43
CCDC38-203ENST00000546803 FUT9Q9Y231 359 aa12.38□□□□□ -0.43
CCDC38-203ENST00000546803 TRAV8-2A0A0B4J237 113 aa12.37□□□□□ -0.43
CCDC38-203ENST00000546803 SPP1P10451 314 aa12.37□□□□□ -0.43
CCDC38-203ENST00000546803 HLA-DRB4P13762 266 aa12.37□□□□□ -0.43
CCDC38-203ENST00000546803 M6PRP20645 277 aa12.37□□□□□ -0.43
CCDC38-203ENST00000546803 RHOBP62745 196 aa12.37□□□□□ -0.43
CCDC38-203ENST00000546803 ZNF345Q14585 488 aa12.37□□□□□ -0.43
CCDC38-203ENST00000546803 ACOT6Q3I5F7 207 aaPredicted RBP12.37□□□□□ -0.43
CCDC38-203ENST00000546803 MORN3Q6PF18 240 aaPredicted RBP12.37□□□□□ -0.43
CCDC38-203ENST00000546803 HSD17B11Q8NBQ5 300 aa12.37□□□□□ -0.43
CCDC38-203ENST00000546803 OR2G3Q8NGZ4 309 aa12.37□□□□□ -0.43
CCDC38-203ENST00000546803 ST6GAL2Q96JF0 529 aa12.37□□□□□ -0.43
CCDC38-203ENST00000546803 SAV1Q9H4B6 383 aaPredicted RBP12.37□□□□□ -0.43
CCDC38-203ENST00000546803 CLEC5AQ9NY25 188 aa12.37□□□□□ -0.43
CCDC38-203ENST00000546803 TP53TG1Q9Y2A0 90 aa12.37□□□□□ -0.43
CCDC38-203ENST00000546803 HLA-DRB4X5D2U9 266 aa12.37□□□□□ -0.43
CCDC38-203ENST00000546803 H3BMM0 161 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms