RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ZNF345Q14585 488 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 OPCMLQ14982 345 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 ADAMTSL5Q6ZMM2 481 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 NARS2Q96I59 477 aaKnown RBP4.78□□□□□ -1.64
PRKDC-211ENST00000546304 NPCDR1Q9BY65 106 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 KCNIP2Q9NS61 270 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 MRPL27Q9P0M9 148 aaKnown RBP4.78□□□□□ -1.64
PRKDC-211ENST00000546304 DOK5Q9P104 306 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 MLXQ9UH92 298 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 DNAH9Q9NYC9 4486 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 IGHV3OR16-13A0A075B7E8 117 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 IGHV3-74A0A0B4J1X5 117 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 IGHV3-66A0A0C4DH42 116 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 WI2-2373I1.2A0A1W2PRP0 233 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 PGPEP1LA6NFU8 196 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 C8orf88P0DMB2 117 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 NPPCP23582 126 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 CRYBB3P26998 211 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 EIF2B2P49770 351 aaKnown RBP4.77□□□□□ -1.65
PRKDC-211ENST00000546304 AP2S1P53680 142 aaPredicted RBP4.77□□□□□ -1.65
PRKDC-211ENST00000546304 B2MP61769 119 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 EGFEM1PQ0D2K5 195 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 CD300EQ496F6 205 aaPredicted RBP4.77□□□□□ -1.65
PRKDC-211ENST00000546304 KPRPQ5T749 579 aaPredicted RBP4.77□□□□□ -1.65
PRKDC-211ENST00000546304 LCN12Q6JVE5 192 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 TMEM182Q6ZP80 229 aaPredicted RBP4.77□□□□□ -1.65
PRKDC-211ENST00000546304 TMEM61Q8N0U2 210 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 OR11H4Q8NGC9 324 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 OR1B1Q8NGR6 318 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 OR2K2Q8NGT1 345 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 KRTAP9-8Q9BYQ0 159 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 WDR61Q9GZS3 305 aaKnown RBP4.77□□□□□ -1.65
PRKDC-211ENST00000546304 MFFQ9GZY8 342 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 TMEM231Q9H6L2 316 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 TECRQ9NZ01 308 aaKnown RBP4.77□□□□□ -1.65
PRKDC-211ENST00000546304 SMPXQ9UHP9 88 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 RABAC1Q9UI14 185 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 SLC45A2Q9UMX9 530 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 SELENOKQ9Y6D0 94 aa4.77□□□□□ -1.65
PRKDC-211ENST00000546304 A0A1W2PS18 150 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 HMSDA8MTL9 139 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 H3BRN7 92 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 CHEK1O14757 476 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 COX7A2P2O60397 106 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 IFNA5P01569 189 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 C1QBP02746 253 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 APOHP02749 345 aaPredicted RBP4.76□□□□□ -1.65
PRKDC-211ENST00000546304 ORM2P19652 201 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 RPL29P47914 159 aaKnown RBP4.76□□□□□ -1.65
PRKDC-211ENST00000546304 PLP1P60201 277 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 CD300CQ08708 224 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 PMS2P11Q13670 270 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 DEFB114Q30KQ6 69 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 PXDC1Q5TGL8 231 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 MIC13Q5XKP0 118 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 ZNF575Q86XF7 245 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 ZNF709Q8N972 641 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 GLMPQ8WWB7 406 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 PPP1R14BQ96C90 147 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 GRAMD2BQ96HH9 432 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 RNF2Q99496 336 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 RSG1Q9BU20 258 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 RHPN1-AS1Q9BWJ2 59 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 PARD6GQ9BYG4 376 aaPredicted RBP4.76□□□□□ -1.65
PRKDC-211ENST00000546304 ARL6Q9H0F7 186 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 VSIRQ9H7M9 311 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 WFDC1Q9HC57 220 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 SLC39A9Q9NUM3 307 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 HIGD1AQ9Y241 93 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 ZNF256Q9Y2P7 627 aaPredicted RBP4.76□□□□□ -1.65
PRKDC-211ENST00000546304 PXMP4Q9Y6I8 212 aa4.76□□□□□ -1.65
PRKDC-211ENST00000546304 BORCS7-ASMTA0A0B4J1R7 106 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 TRAV25A0A0B4J276 109 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 IZUMO1RA6ND01 250 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 C17orf112F2Z3M2 114 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 TSPAN4O14817 238 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 BCL2L11O43521 198 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 BUB3O43684 328 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 HYPMO75409 117 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 OR5G3P0C626 314 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 S100A7P31151 101 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 KRTAP10-11P60412 298 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 GUCA2BQ16661 112 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 ZFP69Q49AA0 526 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 RPL7L1Q6DKI1 246 aaKnown RBP4.75□□□□□ -1.65
PRKDC-211ENST00000546304 LAMTOR1Q6IAA8 161 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 Q6ZRG5 221 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 RBPMS2Q6ZRY4 209 aaKnown RBP4.75□□□□□ -1.65
PRKDC-211ENST00000546304 TCF24Q7RTU0 167 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 KCNRGQ8N5I3 272 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 HSD17B11Q8NBQ5 300 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 SCGB1C1Q8TD33 95 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 UHRF2Q96PU4 802 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 PFDN5Q99471 154 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 SPAG8Q99932 426 aaPredicted RBP4.75□□□□□ -1.65
PRKDC-211ENST00000546304 SHANK2-AS3Q9BTD1 123 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 SCRT1Q9BWW7 348 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 ARV1Q9H2C2 271 aa4.75□□□□□ -1.65
PRKDC-211ENST00000546304 SLC25A22Q9H936 323 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms