RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 SLC38A11Q08AI6 406 aa8.63□□□□□ -1.03
HDAC4-216ENST00000544989 EBLN2Q6P2I7 272 aa8.63□□□□□ -1.03
HDAC4-216ENST00000544989 C16orf92Q96LL3 132 aa8.63□□□□□ -1.03
HDAC4-216ENST00000544989 LINC00052Q96N35 136 aa8.63□□□□□ -1.03
HDAC4-216ENST00000544989 SHANK2-AS3Q9BTD1 123 aa8.63□□□□□ -1.03
HDAC4-216ENST00000544989 SLC25A39Q9BZJ4 359 aaPredicted RBP8.63□□□□□ -1.03
HDAC4-216ENST00000544989 SLC25A32Q9H2D1 315 aa8.63□□□□□ -1.03
HDAC4-216ENST00000544989 LYRM2Q9NU23 88 aaPredicted RBP8.63□□□□□ -1.03
HDAC4-216ENST00000544989 KLK5Q9Y337 293 aaPredicted RBP8.63□□□□□ -1.03
HDAC4-216ENST00000544989 ELOA3CA0A087WX78 387 aaPredicted RBP8.62□□□□□ -1.03
HDAC4-216ENST00000544989 INMT-MINDY4F8WBC2 141 aa8.62□□□□□ -1.03
HDAC4-216ENST00000544989 SOCS3O14543 225 aa8.62□□□□□ -1.03
HDAC4-216ENST00000544989 OR5G3P0C626 314 aa8.62□□□□□ -1.03
HDAC4-216ENST00000544989 SULT1A1P50225 295 aa8.62□□□□□ -1.03
HDAC4-216ENST00000544989 ATP6V1FQ16864 119 aa8.62□□□□□ -1.03
HDAC4-216ENST00000544989 RSG1Q9BU20 258 aa8.62□□□□□ -1.03
HDAC4-216ENST00000544989 NMES1Q9C002 83 aa8.62□□□□□ -1.03
HDAC4-216ENST00000544989 SAV1Q9H4B6 383 aaPredicted RBP8.62□□□□□ -1.03
HDAC4-216ENST00000544989 UQCC1Q9NVA1 299 aa8.62□□□□□ -1.03
HDAC4-216ENST00000544989 ZNF705EA8MWA4 302 aaPredicted RBP8.61□□□□□ -1.03
HDAC4-216ENST00000544989 AGPAT2O15120 278 aa8.61□□□□□ -1.03
HDAC4-216ENST00000544989 CCNKO75909 580 aa8.61□□□□□ -1.03
HDAC4-216ENST00000544989 GIG44P09565 113 aaPredicted RBP8.61□□□□□ -1.03
HDAC4-216ENST00000544989 CXCL2P19875 107 aa8.61□□□□□ -1.03
HDAC4-216ENST00000544989 IL15RAQ13261 267 aa8.61□□□□□ -1.03
HDAC4-216ENST00000544989 RAB32Q13637 225 aa8.61□□□□□ -1.03
HDAC4-216ENST00000544989 TMEM182Q6ZP80 229 aaPredicted RBP8.61□□□□□ -1.03
HDAC4-216ENST00000544989 Q6ZRG5 221 aa8.61□□□□□ -1.03
HDAC4-216ENST00000544989 NRARPQ7Z6K4 114 aa8.61□□□□□ -1.03
HDAC4-216ENST00000544989 MARVELD1Q9BSK0 173 aa8.61□□□□□ -1.03
HDAC4-216ENST00000544989 ARL6Q9H0F7 186 aa8.61□□□□□ -1.03
HDAC4-216ENST00000544989 DOK5Q9P104 306 aa8.61□□□□□ -1.03
HDAC4-216ENST00000544989 AGRNO00468 2067 aa8.61□□□□□ -1.03
HDAC4-216ENST00000544989 A0A087X0K7 114 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 COX7A2P2O60397 106 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 MPDU1O75352 247 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 CST7O76096 145 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 DUSP14O95147 198 aaKnown RBP8.6□□□□□ -1.03
HDAC4-216ENST00000544989 PET100P0DJ07 73 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 C4BPBP20851 252 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 CAMLGP49069 296 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 IFITM3Q01628 133 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 ARL16Q0P5N6 197 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 PMS2P11Q13670 270 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 VWC2Q2TAL6 325 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 CEMP1Q6PRD7 247 aaPredicted RBP8.6□□□□□ -1.03
HDAC4-216ENST00000544989 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 TMEM252Q8N6L7 170 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 OR1L4Q8NGR5 311 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 C11orf45Q8TAV5 145 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 SLC25A31Q9H0C2 315 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 ARV1Q9H2C2 271 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 HRH4Q9H3N8 390 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 C11orf1Q9H5F2 150 aa8.6□□□□□ -1.03
HDAC4-216ENST00000544989 FAM24AA6NFZ4 105 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 E5RGE8 158 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 AMBPP02760 352 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 PSG9Q00887 426 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 LINC00305Q7Z4B0 112 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 BPIFA4PQ86YQ2 179 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 Q8NAQ8 132 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 CSNK1G2-AS1Q8NCQ2 148 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 LRRC20Q8TCA0 184 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 CHAC2Q8WUX2 184 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 PFDN5Q99471 154 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 NEU1Q99519 415 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 MGST2Q99735 147 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 SCRT1Q9BWW7 348 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 CLEC5AQ9NY25 188 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 WDR83OSQ9Y284 106 aa8.59□□□□□ -1.03
HDAC4-216ENST00000544989 A0A0J9YX75 114 aa8.58□□□□□ -1.04
HDAC4-216ENST00000544989 TMEM189A5PLL7 270 aa8.58□□□□□ -1.04
HDAC4-216ENST00000544989 SMIM9A6NGZ8 99 aa8.58□□□□□ -1.04
HDAC4-216ENST00000544989 C11orf94C9JXX5 98 aa8.58□□□□□ -1.04
HDAC4-216ENST00000544989 SSNA1O43805 119 aa8.58□□□□□ -1.04
HDAC4-216ENST00000544989 RPL29P47914 159 aaKnown RBP8.58□□□□□ -1.04
HDAC4-216ENST00000544989 BAXQ07812 192 aa8.58□□□□□ -1.04
HDAC4-216ENST00000544989 C10orf113Q5VZT2 155 aa8.58□□□□□ -1.04
HDAC4-216ENST00000544989 LCN15Q6UWW0 184 aa8.58□□□□□ -1.04
HDAC4-216ENST00000544989 OR4B1Q8NGF8 309 aa8.58□□□□□ -1.04
HDAC4-216ENST00000544989 PHLDA1Q8WV24 401 aaPredicted RBP8.58□□□□□ -1.04
HDAC4-216ENST00000544989 DNAJC4Q9NNZ3 241 aa8.58□□□□□ -1.04
HDAC4-216ENST00000544989 XCL2Q9UBD3 114 aa8.58□□□□□ -1.04
HDAC4-216ENST00000544989 IGHV4-28A0A0C4DH34 117 aa8.57□□□□□ -1.04
HDAC4-216ENST00000544989 IGSF23A1L1A6 192 aa8.57□□□□□ -1.04
HDAC4-216ENST00000544989 TCTAP57738 103 aa8.57□□□□□ -1.04
HDAC4-216ENST00000544989 EWSR1Q01844 656 aaKnown RBP eCLIP8.57□□□□□ -1.044e-6■■■□□ 15
HDAC4-216ENST00000544989 FGL1Q08830 312 aa8.57□□□□□ -1.04
HDAC4-216ENST00000544989 FAM78BQ5VT40 261 aa8.57□□□□□ -1.04
HDAC4-216ENST00000544989 PATE2Q6UY27 113 aa8.57□□□□□ -1.04
HDAC4-216ENST00000544989 UHRF2Q96PU4 802 aa8.57□□□□□ -1.04
HDAC4-216ENST00000544989 SLC50A1Q9BRV3 221 aa8.57□□□□□ -1.04
HDAC4-216ENST00000544989 KCNIP2Q9NS61 270 aa8.57□□□□□ -1.04
HDAC4-216ENST00000544989 GOLT1BQ9Y3E0 138 aa8.57□□□□□ -1.04
HDAC4-216ENST00000544989 X6R8D5 127 aa8.57□□□□□ -1.04
HDAC4-216ENST00000544989 UBE2L5PA0A1B0GUS4 154 aa8.56□□□□□ -1.04
HDAC4-216ENST00000544989 TEX48A0A1B0GUV7 120 aa8.56□□□□□ -1.04
HDAC4-216ENST00000544989 A8MTW9 85 aa8.56□□□□□ -1.04
HDAC4-216ENST00000544989 B2MP61769 119 aa8.56□□□□□ -1.04
HDAC4-216ENST00000544989 PRR20EP86478 221 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms