RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 UHRF2Q96PU4 802 aa9.3□□□□□ -0.92
ACTN1-206ENST00000544964 PARD6GQ9BYG4 376 aaPredicted RBP9.3□□□□□ -0.92
ACTN1-206ENST00000544964 SLC39A9Q9NUM3 307 aa9.3□□□□□ -0.92
ACTN1-206ENST00000544964 HIGD1AQ9Y241 93 aa9.3□□□□□ -0.92
ACTN1-206ENST00000544964 RBMY1BA6NDE4 496 aaKnown RBP9.29□□□□□ -0.92
ACTN1-206ENST00000544964 RBMY1EA6NEQ0 496 aaKnown RBP9.29□□□□□ -0.92
ACTN1-206ENST00000544964 COX7A2P2O60397 106 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 RBMY1DP0C7P1 496 aaKnown RBP9.29□□□□□ -0.92
ACTN1-206ENST00000544964 BMI1P35226 326 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 ZNF266Q14584 549 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 ZNF345Q14585 488 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 GUCA2BQ16661 112 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 GCSAMLQ5JQS6 135 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 LEMD1Q68G75 181 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 RBPMS2Q6ZRY4 209 aaKnown RBP9.29□□□□□ -0.92
ACTN1-206ENST00000544964 DEFB125Q8N687 156 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 TMEM37Q8WXS4 190 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 SCRT1Q9BWW7 348 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 SLC25A39Q9BZJ4 359 aaPredicted RBP9.29□□□□□ -0.92
ACTN1-206ENST00000544964 ARV1Q9H2C2 271 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 TMEM231Q9H6L2 316 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 SLC25A22Q9H936 323 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 CYTL1Q9NRR1 136 aa9.29□□□□□ -0.92
ACTN1-206ENST00000544964 BORCS7-ASMTA0A0B4J1R7 106 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 A0A0D9SG52 128 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 H3BRN7 92 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 TAAR5O14804 337 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 RPL11P62913 178 aaKnown RBP9.28□□□□□ -0.92
ACTN1-206ENST00000544964 LGALSLQ3ZCW2 172 aaPredicted RBP9.28□□□□□ -0.92
ACTN1-206ENST00000544964 ZFP69Q49AA0 526 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 FFAR4Q5NUL3 377 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 PXDC1Q5TGL8 231 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 C10orf113Q5VZT2 155 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 FAM90A2PQ658T7 463 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 LAMTOR1Q6IAA8 161 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 TMUB2Q71RG4 321 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 LINC00305Q7Z4B0 112 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 GBGT1Q8N5D6 347 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 GLMPQ8WWB7 406 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 HYLS1Q96M11 299 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 ARPC5LQ9BPX5 153 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 PFDN2Q9UHV9 154 aa9.28□□□□□ -0.92
ACTN1-206ENST00000544964 TRAV25A0A0B4J276 109 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 KANTRA0A1W2PQU2 76 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 ZNF98A6NK75 572 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 BCL2L11O43521 198 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 PFDN1O60925 122 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 ATP6V0CP27449 155 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 TFPI2P48307 235 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 SIGLEC15Q6ZMC9 328 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 WFDC3Q8IUB2 231 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 OR1L4Q8NGR5 311 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 SHANK2-AS3Q9BTD1 123 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 SH3BGRL3Q9H299 93 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 SLC25A32Q9H2D1 315 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 SRD5A3Q9H8P0 318 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 DNAJC4Q9NNZ3 241 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 KCNIP2Q9NS61 270 aa9.27□□□□□ -0.93
ACTN1-206ENST00000544964 ELOA3CA0A087WX78 387 aaPredicted RBP9.26□□□□□ -0.93
ACTN1-206ENST00000544964 TRAV5A0A0B4J249 113 aa9.26□□□□□ -0.93
ACTN1-206ENST00000544964 TSPAN4O14817 238 aa9.26□□□□□ -0.93
ACTN1-206ENST00000544964 JTBO76095 146 aa9.26□□□□□ -0.93
ACTN1-206ENST00000544964 MORN5Q5VZ52 161 aa9.26□□□□□ -0.93
ACTN1-206ENST00000544964 SPATA31B1PQ5VZV4 182 aa9.26□□□□□ -0.93
ACTN1-206ENST00000544964 OR8I2Q8N0Y5 310 aa9.26□□□□□ -0.93
ACTN1-206ENST00000544964 STXBP6Q8NFX7 210 aa9.26□□□□□ -0.93
ACTN1-206ENST00000544964 PFDN5Q99471 154 aa9.26□□□□□ -0.93
ACTN1-206ENST00000544964 TIMM9Q9Y5J7 89 aa9.26□□□□□ -0.93
ACTN1-206ENST00000544964 HELTA6NFD8 242 aa9.25□□□□□ -0.93
ACTN1-206ENST00000544964 OR11H12B2RN74 326 aa9.25□□□□□ -0.93
ACTN1-206ENST00000544964 S100A7P31151 101 aa9.25□□□□□ -0.93
ACTN1-206ENST00000544964 NKX2-5P52952 324 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-206ENST00000544964 C1orf194Q5T5A4 169 aa9.25□□□□□ -0.93
ACTN1-206ENST00000544964 S100A7AQ86SG5 101 aa9.25□□□□□ -0.93
ACTN1-206ENST00000544964 C9orf62Q8N4C0 152 aa9.25□□□□□ -0.93
ACTN1-206ENST00000544964 GATAD1Q8WUU5 269 aa9.25□□□□□ -0.93
ACTN1-206ENST00000544964 SPAG8Q99932 426 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-206ENST00000544964 ZNF471Q9BX82 626 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-206ENST00000544964 MS4A6AQ9H2W1 248 aa9.25□□□□□ -0.93
ACTN1-206ENST00000544964 DNASE2O00115 360 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-206ENST00000544964 EIF3GO75821 320 aaKnown RBP eCLIP9.24□□□□□ -0.93
ACTN1-206ENST00000544964 CD5P06127 495 aa9.24□□□□□ -0.93
ACTN1-206ENST00000544964 RAB2AP61019 212 aa9.24□□□□□ -0.93
ACTN1-206ENST00000544964 FAM78BQ5VT40 261 aa9.24□□□□□ -0.93
ACTN1-206ENST00000544964 MIR17HGQ75NE6 70 aa9.24□□□□□ -0.93
ACTN1-206ENST00000544964 OR2G3Q8NGZ4 309 aa9.24□□□□□ -0.93
ACTN1-206ENST00000544964 GNPNAT1Q96EK6 184 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-206ENST00000544964 PSMG3Q9BT73 122 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-206ENST00000544964 SEPSECSQ9HD40 501 aaKnown RBP9.24□□□□□ -0.93
ACTN1-206ENST00000544964 OR4C46A6NHA9 309 aa9.23□□□□□ -0.93
ACTN1-206ENST00000544964 SNRPCP09234 159 aaKnown RBP9.23□□□□□ -0.93
ACTN1-206ENST00000544964 GALR1P47211 349 aa9.23□□□□□ -0.93
ACTN1-206ENST00000544964 PAFAH1B2P68402 229 aa9.23□□□□□ -0.93
ACTN1-206ENST00000544964 ACOT6Q3I5F7 207 aaPredicted RBP9.23□□□□□ -0.93
ACTN1-206ENST00000544964 FAM122CQ6P4D5 195 aa9.23□□□□□ -0.93
ACTN1-206ENST00000544964 FAM24BQ8N5W8 94 aa9.23□□□□□ -0.93
ACTN1-206ENST00000544964 FAM210AQ96ND0 272 aa9.23□□□□□ -0.93
ACTN1-206ENST00000544964 UBQLN2Q9UHD9 624 aa9.23□□□□□ -0.93
ACTN1-206ENST00000544964 FRAS1Q86XX4 4008 aa9.23□□□□□ -0.93
ACTN1-206ENST00000544964 MRPS12O15235 138 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms