RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 EMP1P54849 157 aa9.05□□□□□ -0.96
USP28-212ENST00000544750 RAB11AP62491 216 aa9.05□□□□□ -0.96
USP28-212ENST00000544750 ZNF90Q03938 601 aa9.05□□□□□ -0.96
USP28-212ENST00000544750 SPANXN5Q5MJ07 72 aa9.05□□□□□ -0.96
USP28-212ENST00000544750 GDF5OSQ5U4N7 250 aa9.05□□□□□ -0.96
USP28-212ENST00000544750 TMEM88Q6PEY1 159 aa9.05□□□□□ -0.96
USP28-212ENST00000544750 NRARPQ7Z6K4 114 aa9.05□□□□□ -0.96
USP28-212ENST00000544750 THAP8Q8NA92 274 aa9.05□□□□□ -0.96
USP28-212ENST00000544750 NARS2Q96I59 477 aaKnown RBP9.05□□□□□ -0.96
USP28-212ENST00000544750 SLC35E1Q96K37 410 aa9.05□□□□□ -0.96
USP28-212ENST00000544750 RFNGQ9Y644 331 aa9.05□□□□□ -0.96
USP28-212ENST00000544750 FAT1Q14517 4588 aa9.05□□□□□ -0.96
USP28-212ENST00000544750 MBPP02686 304 aaPredicted RBP9.04□□□□□ -0.96
USP28-212ENST00000544750 IL4P05112 153 aa9.04□□□□□ -0.96
USP28-212ENST00000544750 IL5P05113 134 aa9.04□□□□□ -0.96
USP28-212ENST00000544750 SNRPD3P62318 126 aaKnown RBP9.04□□□□□ -0.96
USP28-212ENST00000544750 TMEM14EPQ6UXP3 125 aa9.04□□□□□ -0.96
USP28-212ENST00000544750 C6orf223Q8N319 242 aa9.04□□□□□ -0.96
USP28-212ENST00000544750 C12orf45Q8N5I9 185 aaPredicted RBP9.04□□□□□ -0.96
USP28-212ENST00000544750 ZNF709Q8N972 641 aa9.04□□□□□ -0.96
USP28-212ENST00000544750 Q8WTZ3 238 aa9.04□□□□□ -0.96
USP28-212ENST00000544750 SMIM8Q96KF7 97 aa9.04□□□□□ -0.96
USP28-212ENST00000544750 C11orf1Q9H5F2 150 aa9.04□□□□□ -0.96
USP28-212ENST00000544750 NRN1Q9NPD7 142 aa9.04□□□□□ -0.96
USP28-212ENST00000544750 PSENENQ9NZ42 101 aa9.04□□□□□ -0.96
USP28-212ENST00000544750 PAIP2BQ9ULR5 123 aaKnown RBP9.04□□□□□ -0.96
USP28-212ENST00000544750 STRAPQ9Y3F4 350 aaKnown RBP9.04□□□□□ -0.96
USP28-212ENST00000544750 DMBT1Q9UGM3 2413 aaPredicted RBP9.04□□□□□ -0.96
USP28-212ENST00000544750 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 BUB3O43684 328 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 SCGB1D2O95969 90 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 RD3LP0DJH9 198 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 HTN3P15516 51 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 DEFB1P60022 68 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 RPP30P78346 268 aaKnown RBP9.03□□□□□ -0.96
USP28-212ENST00000544750 IL15RAQ13261 267 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 ACOT7LQ6ZUV0 252 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 ZNRF2Q8NHG8 242 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 ENKURQ8TC29 256 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 CLUHP3Q96NS8 147 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 TRGV9Q99603 122 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 GSKIPQ9P0R6 139 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 VPS13BQ7Z7G8 4022 aa9.03□□□□□ -0.96
USP28-212ENST00000544750 IGHV3OR16-12A0A075B7B8 117 aa9.02□□□□□ -0.97
USP28-212ENST00000544750 C7orf66A4D0T2 115 aa9.02□□□□□ -0.97
USP28-212ENST00000544750 ZFP92A6NM28 416 aa9.02□□□□□ -0.97
USP28-212ENST00000544750 FXYD7P58549 80 aa9.02□□□□□ -0.97
USP28-212ENST00000544750 TAS2R30P59541 319 aa9.02□□□□□ -0.97
USP28-212ENST00000544750 C1orf158Q8N1D5 194 aa9.02□□□□□ -0.97
USP28-212ENST00000544750 C15orf53Q8NAA6 179 aa9.02□□□□□ -0.97
USP28-212ENST00000544750 OR51G1Q8NGK1 321 aa9.02□□□□□ -0.97
USP28-212ENST00000544750 RNF125Q96EQ8 232 aa9.02□□□□□ -0.97
USP28-212ENST00000544750 YTHDF2Q9Y5A9 579 aaKnown RBP9.02□□□□□ -0.97
USP28-212ENST00000544750 FAM25EA8MYX2 175 aa9.01□□□□□ -0.97
USP28-212ENST00000544750 K7EPK0 472 aa9.01□□□□□ -0.97
USP28-212ENST00000544750 TSC22D2O75157 780 aa9.01□□□□□ -0.97
USP28-212ENST00000544750 METTL15P1P0C7V9 234 aa9.01□□□□□ -0.97
USP28-212ENST00000544750 ARL16Q0P5N6 197 aa9.01□□□□□ -0.97
USP28-212ENST00000544750 OR8G2PQ6IF36 304 aa9.01□□□□□ -0.97
USP28-212ENST00000544750 SIGLEC15Q6ZMC9 328 aa9.01□□□□□ -0.97
USP28-212ENST00000544750 TMEM182Q6ZP80 229 aaPredicted RBP9.01□□□□□ -0.97
USP28-212ENST00000544750 C2orf50Q96LR7 162 aa9.01□□□□□ -0.97
USP28-212ENST00000544750 MARVELD1Q9BSK0 173 aa9.01□□□□□ -0.97
USP28-212ENST00000544750 SAV1Q9H4B6 383 aaPredicted RBP9.01□□□□□ -0.97
USP28-212ENST00000544750 C5orf51A6NDU8 294 aa9□□□□□ -0.97
USP28-212ENST00000544750 OR2F1Q13607 317 aa9□□□□□ -0.97
USP28-212ENST00000544750 TMEM144Q7Z5S9 345 aa9□□□□□ -0.97
USP28-212ENST00000544750 SPATA12Q7Z6I5 190 aa9□□□□□ -0.97
USP28-212ENST00000544750 SLC35B3Q9H1N7 401 aa9□□□□□ -0.97
USP28-212ENST00000544750 LOC102723971A0A1B0GUV8 181 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 SNRPGP15A8MWD9 76 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 INMT-MINDY4F8WBC2 141 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 SOCS3O14543 225 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 IGKV3-20P01619 116 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 GATA2P23769 480 aaPredicted RBP8.99□□□□□ -0.97
USP28-212ENST00000544750 LYZP61626 148 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 DAD1P61803 113 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 RRAS2P62070 204 aaPredicted RBP8.99□□□□□ -0.97
USP28-212ENST00000544750 DLK1P80370 383 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 AKR1C1Q04828 323 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 RAB32Q13637 225 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 GSG1LQ6UXU4 331 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 FOXI2Q6ZQN5 318 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 PBDC1Q9BVG4 233 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 LSM5Q9Y4Y9 91 aaKnown RBP8.99□□□□□ -0.97
USP28-212ENST00000544750 MYCBP2O75592 4640 aa8.99□□□□□ -0.97
USP28-212ENST00000544750 FNDC10F2Z333 226 aa8.98□□□□□ -0.97
USP28-212ENST00000544750 PRAF2O60831 178 aa8.98□□□□□ -0.97
USP28-212ENST00000544750 HBE1P02100 147 aa8.98□□□□□ -0.97
USP28-212ENST00000544750 DEFA1P59665 94 aa8.98□□□□□ -0.97
USP28-212ENST00000544750 DEFA3P59666 94 aa8.98□□□□□ -0.97
USP28-212ENST00000544750 KRTAP10-2P60368 255 aa8.98□□□□□ -0.97
USP28-212ENST00000544750 ATG101Q9BSB4 218 aa8.98□□□□□ -0.97
USP28-212ENST00000544750 GPN1Q9HCN4 374 aaPredicted RBP8.98□□□□□ -0.97
USP28-212ENST00000544750 SMCO3A2RU48 225 aa8.97□□□□□ -0.97
USP28-212ENST00000544750 A8MTW9 85 aa8.97□□□□□ -0.97
USP28-212ENST00000544750 SIX6O95475 246 aa8.97□□□□□ -0.97
USP28-212ENST00000544750 FABP1P07148 127 aa8.97□□□□□ -0.97
USP28-212ENST00000544750 RRN3P1Q2M238 152 aa8.97□□□□□ -0.97
USP28-212ENST00000544750 CYP2G1PQ6ZSU1 146 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms