RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 CLINT1Q14677 625 aa14.11□□□□□ -0.15
DDX55-211ENST00000544429 LEMD1Q68G75 181 aa14.11□□□□□ -0.15
DDX55-211ENST00000544429 KIR2DL5AQ8N109 375 aa14.11□□□□□ -0.15
DDX55-211ENST00000544429 KIR2DL5BQ8NHK3 375 aa14.11□□□□□ -0.15
DDX55-211ENST00000544429 WDR61Q9GZS3 305 aaKnown RBP14.11□□□□□ -0.15
DDX55-211ENST00000544429 U3KQK5 164 aa14.11□□□□□ -0.15
DDX55-211ENST00000544429 FGL1Q08830 312 aa14.1□□□□□ -0.15
DDX55-211ENST00000544429 S100A7AQ86SG5 101 aa14.1□□□□□ -0.15
DDX55-211ENST00000544429 ATP5SQ99766 215 aa14.1□□□□□ -0.15
DDX55-211ENST00000544429 SLC25A22Q9H936 323 aa14.1□□□□□ -0.15
DDX55-211ENST00000544429 SLC39A9Q9NUM3 307 aa14.1□□□□□ -0.15
DDX55-211ENST00000544429 GALR1P47211 349 aa14.09□□□□□ -0.15
DDX55-211ENST00000544429 B2MP61769 119 aa14.09□□□□□ -0.15
DDX55-211ENST00000544429 MORN5Q5VZ52 161 aa14.09□□□□□ -0.15
DDX55-211ENST00000544429 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.09□□□□□ -0.15
DDX55-211ENST00000544429 Q6ZRG5 221 aa14.09□□□□□ -0.15
DDX55-211ENST00000544429 LINC00305Q7Z4B0 112 aa14.09□□□□□ -0.15
DDX55-211ENST00000544429 AQP10Q96PS8 301 aa14.09□□□□□ -0.15
DDX55-211ENST00000544429 SPATA25Q9BR10 227 aa14.09□□□□□ -0.15
DDX55-211ENST00000544429 PARD6GQ9BYG4 376 aaPredicted RBP14.09□□□□□ -0.15
DDX55-211ENST00000544429 ZMAT4Q9H898 229 aa14.09□□□□□ -0.15
DDX55-211ENST00000544429 DNAJC4Q9NNZ3 241 aa14.09□□□□□ -0.15
DDX55-211ENST00000544429 PXMP4Q9Y6I8 212 aa14.09□□□□□ -0.15
DDX55-211ENST00000544429 ISLRO14498 428 aa14.08□□□□□ -0.16
DDX55-211ENST00000544429 RPL7P18124 248 aaKnown RBP14.08□□□□□ -0.16
DDX55-211ENST00000544429 PSMB3P49720 205 aa14.08□□□□□ -0.16
DDX55-211ENST00000544429 MEOX2P50222 304 aa14.08□□□□□ -0.16
DDX55-211ENST00000544429 SNRPD3P62318 126 aaKnown RBP14.08□□□□□ -0.16
DDX55-211ENST00000544429 SAMD13Q5VXD3 122 aa14.08□□□□□ -0.16
DDX55-211ENST00000544429 RCHY1Q96PM5 261 aa14.08□□□□□ -0.16
DDX55-211ENST00000544429 WFDC1Q9HC57 220 aa14.08□□□□□ -0.16
DDX55-211ENST00000544429 RNF24Q9Y225 148 aa14.08□□□□□ -0.16
DDX55-211ENST00000544429 A0A087X0K7 114 aa14.07□□□□□ -0.16
DDX55-211ENST00000544429 COX7A2P2O60397 106 aa14.07□□□□□ -0.16
DDX55-211ENST00000544429 APOC4P55056 127 aa14.07□□□□□ -0.16
DDX55-211ENST00000544429 PSMG4Q5JS54 123 aa14.07□□□□□ -0.16
DDX55-211ENST00000544429 C10orf113Q5VZT2 155 aa14.07□□□□□ -0.16
DDX55-211ENST00000544429 OR1L4Q8NGR5 311 aa14.07□□□□□ -0.16
DDX55-211ENST00000544429 PFDN5Q99471 154 aa14.07□□□□□ -0.16
DDX55-211ENST00000544429 RSG1Q9BU20 258 aa14.07□□□□□ -0.16
DDX55-211ENST00000544429 Q6ZWC4 215 aa14.06□□□□□ -0.16
DDX55-211ENST00000544429 TRPT1Q86TN4 253 aaKnown RBP14.06□□□□□ -0.16
DDX55-211ENST00000544429 OR2T35Q8NGX2 323 aa14.06□□□□□ -0.16
DDX55-211ENST00000544429 GATAD1Q8WUU5 269 aa14.06□□□□□ -0.16
DDX55-211ENST00000544429 RNF222A6NCQ9 220 aa14.05□□□□□ -0.16
DDX55-211ENST00000544429 UBE2CO00762 179 aa14.05□□□□□ -0.16
DDX55-211ENST00000544429 RPL35AP18077 110 aaKnown RBP14.05□□□□□ -0.16
DDX55-211ENST00000544429 SMIM3Q9BZL3 60 aa14.05□□□□□ -0.16
DDX55-211ENST00000544429 RETNQ9HD89 108 aa14.05□□□□□ -0.16
DDX55-211ENST00000544429 TRAV8-2A0A0B4J237 113 aa14.04□□□□□ -0.16
DDX55-211ENST00000544429 GCSAMLQ5JQS6 135 aa14.04□□□□□ -0.16
DDX55-211ENST00000544429 KCNIP2Q9NS61 270 aa14.04□□□□□ -0.16
DDX55-211ENST00000544429 TNFSF18Q9UNG2 199 aa14.04□□□□□ -0.16
DDX55-211ENST00000544429 KNCNA6PVL3 124 aa14.03□□□□□ -0.16
DDX55-211ENST00000544429 GIG44P09565 113 aaPredicted RBP14.03□□□□□ -0.16
DDX55-211ENST00000544429 IGLC2P0DOY2 106 aa14.03□□□□□ -0.16
DDX55-211ENST00000544429 ID1P41134 155 aa14.03□□□□□ -0.16
DDX55-211ENST00000544429 STHQ8IWL8 128 aa14.03□□□□□ -0.16
DDX55-211ENST00000544429 C20orf173Q96LM9 149 aa14.03□□□□□ -0.16
DDX55-211ENST00000544429 OVOL2Q9BRP0 275 aa14.03□□□□□ -0.16
DDX55-211ENST00000544429 CSTL1Q9H114 145 aa14.03□□□□□ -0.16
DDX55-211ENST00000544429 TP53TG1Q9Y2A0 90 aa14.03□□□□□ -0.16
DDX55-211ENST00000544429 H3BMM0 161 aa14.02□□□□□ -0.17
DDX55-211ENST00000544429 ACTL10Q5JWF8 245 aa14.02□□□□□ -0.17
DDX55-211ENST00000544429 BPIFA4PQ86YQ2 179 aa14.02□□□□□ -0.17
DDX55-211ENST00000544429 C16orf92Q96LL3 132 aa14.02□□□□□ -0.17
DDX55-211ENST00000544429 CLUHP3Q96NS8 147 aa14.02□□□□□ -0.17
DDX55-211ENST00000544429 SAV1Q9H4B6 383 aaPredicted RBP14.02□□□□□ -0.17
DDX55-211ENST00000544429 TRAV5A0A0B4J249 113 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 C17orf112F2Z3M2 114 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 IFNA5P01569 189 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 HLA-DRB4P13762 266 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 ATF4P18848 351 aaPredicted RBP14.01□□□□□ -0.17
DDX55-211ENST00000544429 CXCL2P19875 107 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 GDF5OSQ5U4N7 250 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 Q6ZNX1 250 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 FOXI2Q6ZQN5 318 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 ZNF709Q8N972 641 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 RNF183Q96D59 192 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 WWC2-AS2Q96NR7 200 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 HRH4Q9H3N8 390 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 EDA2RQ9HAV5 297 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 HLA-DRB4X5D2U9 266 aa14.01□□□□□ -0.17
DDX55-211ENST00000544429 A8MTW9 85 aa14□□□□□ -0.17
DDX55-211ENST00000544429 DEFB1P60022 68 aa14□□□□□ -0.17
DDX55-211ENST00000544429 SCGB1C1Q8TD33 95 aa14□□□□□ -0.17
DDX55-211ENST00000544429 SAT2Q96F10 170 aaPredicted RBP14□□□□□ -0.17
DDX55-211ENST00000544429 FAM167A-AS1Q96KT0 104 aa14□□□□□ -0.17
DDX55-211ENST00000544429 TMEM14CQ9P0S9 112 aa14□□□□□ -0.17
DDX55-211ENST00000544429 FXYD6-FXYD2A0A087WZ82 144 aa13.99□□□□□ -0.17
DDX55-211ENST00000544429 H3BQ15 152 aa13.99□□□□□ -0.17
DDX55-211ENST00000544429 SPP1P10451 314 aa13.99□□□□□ -0.17
DDX55-211ENST00000544429 ZNF266Q14584 549 aa13.99□□□□□ -0.17
DDX55-211ENST00000544429 DEFB135Q30KP9 77 aa13.99□□□□□ -0.17
DDX55-211ENST00000544429 FAM78BQ5VT40 261 aa13.99□□□□□ -0.17
DDX55-211ENST00000544429 SPATA31B1PQ5VZV4 182 aa13.99□□□□□ -0.17
DDX55-211ENST00000544429 MORN3Q6PF18 240 aaPredicted RBP13.99□□□□□ -0.17
DDX55-211ENST00000544429 LCN15Q6UWW0 184 aa13.99□□□□□ -0.17
DDX55-211ENST00000544429 INO80EQ8NBZ0 244 aaPredicted RBP13.99□□□□□ -0.17
DDX55-211ENST00000544429 LINC00052Q96N35 136 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms