RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 PTPN13Q12923 2485 aa12.55□□□□□ -0.4
SNRNP70-203ENST00000544278 PRRX1P54821 245 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 IGHV3OR16-13A0A075B7E8 117 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 IGHV3-74A0A0B4J1X5 117 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 MC5RP33032 325 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 OR8B3Q8NGG8 313 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 ZNF596Q8TC21 504 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 OR8B2Q96RD0 313 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 KAAG1Q9UBP8 84 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 TEX22C9J3V5 150 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 NBEAP1P0C6P0 100 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 FOXA3P55318 350 aaPredicted RBP12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 SLAQ13239 276 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 ZNF738Q8NE65 137 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 NUDT10Q8NFP7 164 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 CACNG8Q8WXS5 425 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 NUDT11Q96G61 164 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 TBL2Q9Y4P3 447 aaKnown RBP12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 EPG5Q9HCE0 2579 aa12.54□□□□□ -0.4
SNRNP70-203ENST00000544278 COMPP49747 757 aaPredicted RBP12.53□□□□□ -0.4
SNRNP70-203ENST00000544278 UBE2G1P62253 170 aa12.53□□□□□ -0.4
SNRNP70-203ENST00000544278 CIARTQ8N365 385 aaPredicted RBP12.53□□□□□ -0.4
SNRNP70-203ENST00000544278 IGF2BP2-AS1Q96M15 143 aa12.53□□□□□ -0.4
SNRNP70-203ENST00000544278 VWC2LB2RUY7 222 aa12.53□□□□□ -0.4
SNRNP70-203ENST00000544278 CD99P14209 185 aa12.53□□□□□ -0.4
SNRNP70-203ENST00000544278 RPL19P84098 196 aaKnown RBP12.53□□□□□ -0.4
SNRNP70-203ENST00000544278 WDR73Q6P4I2 378 aa12.53□□□□□ -0.4
SNRNP70-203ENST00000544278 TPPP3Q9BW30 176 aa12.53□□□□□ -0.4
SNRNP70-203ENST00000544278 UBTD1Q9HAC8 227 aa12.53□□□□□ -0.4
SNRNP70-203ENST00000544278 CHTOPQ9Y3Y2 248 aaKnown RBP12.53□□□□□ -0.4
SNRNP70-203ENST00000544278 M0R3E3 92 aa12.52□□□□□ -0.4
SNRNP70-203ENST00000544278 GDF5OSQ5U4N7 250 aa12.52□□□□□ -0.4
SNRNP70-203ENST00000544278 OR2D3Q8NGH3 330 aa12.52□□□□□ -0.4
SNRNP70-203ENST00000544278 C9JCJ5 164 aa12.52□□□□□ -0.41
SNRNP70-203ENST00000544278 ZNF253O75346 499 aa12.52□□□□□ -0.41
SNRNP70-203ENST00000544278 PMCHL1Q16048 86 aa12.52□□□□□ -0.41
SNRNP70-203ENST00000544278 LINC00311Q8N616 119 aa12.52□□□□□ -0.41
SNRNP70-203ENST00000544278 A0A1W2PRE2 83 aa12.52□□□□□ -0.41
SNRNP70-203ENST00000544278 FSTL3O95633 263 aa12.52□□□□□ -0.41
SNRNP70-203ENST00000544278 LGALS7P47929 136 aa12.52□□□□□ -0.41
SNRNP70-203ENST00000544278 Q5PR19 223 aa12.52□□□□□ -0.41
SNRNP70-203ENST00000544278 ZFP36P26651 326 aaKnown RBP12.51□□□□□ -0.41
SNRNP70-203ENST00000544278 GOLT1AQ6ZVE7 132 aa12.51□□□□□ -0.41
SNRNP70-203ENST00000544278 ZNF586Q9NXT0 402 aa12.51□□□□□ -0.41
SNRNP70-203ENST00000544278 MSRB2Q9Y3D2 182 aa12.51□□□□□ -0.41
SNRNP70-203ENST00000544278 NDPQ00604 133 aa12.51□□□□□ -0.41
SNRNP70-203ENST00000544278 PRNTQ86SH4 94 aa12.51□□□□□ -0.41
SNRNP70-203ENST00000544278 UQCR10Q9UDW1 63 aa12.51□□□□□ -0.41
SNRNP70-203ENST00000544278 ZNF462Q96JM2 2506 aa12.51□□□□□ -0.41
SNRNP70-203ENST00000544278 TMEM136Q6ZRR5 245 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 TXNDC17Q9BRA2 123 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 Q9H3A6 140 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 NRN1Q9NPD7 142 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 CDC42EP3Q9UKI2 254 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 COX11Q9Y6N1 276 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 SONP18583 2426 aaKnown RBP12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 TMSB15BA0A087X1C1 80 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 HIGD1CA8MV81 97 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 IGLC2P0DOY2 106 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 IGLC3P0DOY3 106 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 HTR1DP28221 377 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 NHLH1Q02575 133 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 OR1L4Q8NGR5 311 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 SORL1Q92673 2214 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 PGLYRP4Q96LB8 373 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 CLUHP3Q96NS8 147 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 LINC00527Q9UJ94 153 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 IGHV3-49A0A0A0MS15 119 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 BMPR1BO00238 502 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 LIPFP07098 398 aa12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 F11RQ9Y624 299 aaKnown RBP12.5□□□□□ -0.41
SNRNP70-203ENST00000544278 IGHV3-66A0A0C4DH42 116 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 YPEL3P61236 119 aaPredicted RBP12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 NUP35Q8NFH5 326 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 RASL11BQ9BPW5 248 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 IGKV1-17P01599 117 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 IL4P05112 153 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 FCGR2BP31994 310 aaPredicted RBP12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 SMIM15Q7Z3B0 74 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 ORAOV1Q8WV07 137 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 PERPQ96FX8 193 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 MCRIP2Q9BUT9 160 aaKnown RBP12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 EPDR1Q9UM22 224 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 PAFAH1B2P68402 229 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 CX3CL1P78423 397 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 TMEM30BQ3MIR4 351 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 Q56UQ5 140 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 TEX45Q8NA69 505 aa12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 MRPL32Q9BYC8 188 aaKnown RBP12.49□□□□□ -0.41
SNRNP70-203ENST00000544278 CIDEAO60543 219 aa12.48□□□□□ -0.41
SNRNP70-203ENST00000544278 IGLC1P0CG04 106 aa12.48□□□□□ -0.41
SNRNP70-203ENST00000544278 ZNF138P52744 262 aa12.48□□□□□ -0.41
SNRNP70-203ENST00000544278 FAM120AOSQ5T036 256 aa12.48□□□□□ -0.41
SNRNP70-203ENST00000544278 OR4B1Q8NGF8 309 aa12.48□□□□□ -0.41
SNRNP70-203ENST00000544278 ABCA2Q9BZC7 2435 aa12.48□□□□□ -0.41
SNRNP70-203ENST00000544278 FNDC10F2Z333 226 aa12.48□□□□□ -0.41
SNRNP70-203ENST00000544278 OR2J3O76001 311 aa12.48□□□□□ -0.41
SNRNP70-203ENST00000544278 CRYGBP07316 175 aa12.48□□□□□ -0.41
SNRNP70-203ENST00000544278 KLRB1Q12918 225 aa12.48□□□□□ -0.41
SNRNP70-203ENST00000544278 RAB1BQ9H0U4 201 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms