RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 C10orf113Q5VZT2 155 aa11.2□□□□□ -0.62
CD9-210ENST00000543916 LINC00322Q6ZN03 302 aaPredicted RBP11.2□□□□□ -0.62
CD9-210ENST00000543916 Q6ZRG5 221 aa11.2□□□□□ -0.62
CD9-210ENST00000543916 LINC00305Q7Z4B0 112 aa11.2□□□□□ -0.62
CD9-210ENST00000543916 SBSPONQ8IVN8 264 aa11.2□□□□□ -0.62
CD9-210ENST00000543916 ASCL2Q99929 193 aa11.2□□□□□ -0.62
CD9-210ENST00000543916 PARD6GQ9BYG4 376 aaPredicted RBP11.2□□□□□ -0.62
CD9-210ENST00000543916 hCG_2014768A0A024R1R8 64 aa11.19□□□□□ -0.62
CD9-210ENST00000543916 GALR1P47211 349 aa11.19□□□□□ -0.62
CD9-210ENST00000543916 DEFB131AP59861 70 aa11.19□□□□□ -0.62
CD9-210ENST00000543916 GCSAMLQ5JQS6 135 aa11.19□□□□□ -0.62
CD9-210ENST00000543916 S100A7AQ86SG5 101 aa11.19□□□□□ -0.62
CD9-210ENST00000543916 ZNF709Q8N972 641 aa11.19□□□□□ -0.62
CD9-210ENST00000543916 INO80EQ8NBZ0 244 aaPredicted RBP11.19□□□□□ -0.62
CD9-210ENST00000543916 OR1L4Q8NGR5 311 aa11.19□□□□□ -0.62
CD9-210ENST00000543916 GPR82Q96P67 336 aa11.19□□□□□ -0.62
CD9-210ENST00000543916 DNAJC4Q9NNZ3 241 aa11.19□□□□□ -0.62
CD9-210ENST00000543916 RFNGQ9Y644 331 aa11.19□□□□□ -0.62
CD9-210ENST00000543916 TGP01266 2768 aa11.19□□□□□ -0.62
CD9-210ENST00000543916 SOCS3O14543 225 aa11.18□□□□□ -0.62
CD9-210ENST00000543916 CMC4P56277 68 aaPredicted RBP11.18□□□□□ -0.62
CD9-210ENST00000543916 OR11H4Q8NGC9 324 aa11.18□□□□□ -0.62
CD9-210ENST00000543916 SCGB1C1Q8TD33 95 aa11.18□□□□□ -0.62
CD9-210ENST00000543916 PFDN5Q99471 154 aa11.18□□□□□ -0.62
CD9-210ENST00000543916 KCNIP2Q9NS61 270 aa11.18□□□□□ -0.62
CD9-210ENST00000543916 TRAV5A0A0B4J249 113 aa11.17□□□□□ -0.62
CD9-210ENST00000543916 C17orf112F2Z3M2 114 aa11.17□□□□□ -0.62
CD9-210ENST00000543916 MRPS12O15235 138 aaKnown RBP11.17□□□□□ -0.62
CD9-210ENST00000543916 ARPC5O15511 151 aa11.17□□□□□ -0.62
CD9-210ENST00000543916 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.17□□□□□ -0.62
CD9-210ENST00000543916 GATAD1Q8WUU5 269 aa11.17□□□□□ -0.62
CD9-210ENST00000543916 ST6GAL2Q96JF0 529 aa11.17□□□□□ -0.62
CD9-210ENST00000543916 RPL7P18124 248 aaKnown RBP11.16□□□□□ -0.62
CD9-210ENST00000543916 ATF4P18848 351 aaPredicted RBP11.16□□□□□ -0.62
CD9-210ENST00000543916 ZNF266Q14584 549 aa11.16□□□□□ -0.62
CD9-210ENST00000543916 HAGHQ16775 308 aa11.16□□□□□ -0.62
CD9-210ENST00000543916 PSMG4Q5JS54 123 aa11.16□□□□□ -0.62
CD9-210ENST00000543916 FFAR4Q5NUL3 377 aa11.16□□□□□ -0.62
CD9-210ENST00000543916 SEPSECSQ9HD40 501 aaKnown RBP11.16□□□□□ -0.62
CD9-210ENST00000543916 A0A087X0K7 114 aa11.15□□□□□ -0.62
CD9-210ENST00000543916 LOC102724200A0A096LPH7 203 aaPredicted RBP11.15□□□□□ -0.62
CD9-210ENST00000543916 A0A1B0GVG6 124 aa11.15□□□□□ -0.62
CD9-210ENST00000543916 PSMB3P49720 205 aa11.15□□□□□ -0.62
CD9-210ENST00000543916 MEOX2P50222 304 aa11.15□□□□□ -0.62
CD9-210ENST00000543916 SNRPD3P62318 126 aaKnown RBP11.15□□□□□ -0.62
CD9-210ENST00000543916 SPATA31B1PQ5VZV4 182 aa11.15□□□□□ -0.62
CD9-210ENST00000543916 RPL7L1Q6DKI1 246 aaKnown RBP11.15□□□□□ -0.62
CD9-210ENST00000543916 HSD17B11Q8NBQ5 300 aa11.15□□□□□ -0.62
CD9-210ENST00000543916 MFFQ9GZY8 342 aa11.15□□□□□ -0.62
CD9-210ENST00000543916 RNF24Q9Y225 148 aa11.15□□□□□ -0.62
CD9-210ENST00000543916 DNAH9Q9NYC9 4486 aa11.15□□□□□ -0.62
CD9-210ENST00000543916 KNCNA6PVL3 124 aa11.14□□□□□ -0.63
CD9-210ENST00000543916 SNRPCP09234 159 aaKnown RBP11.14□□□□□ -0.63
CD9-210ENST00000543916 FAM78BQ5VT40 261 aa11.14□□□□□ -0.63
CD9-210ENST00000543916 BPIFA4PQ86YQ2 179 aa11.14□□□□□ -0.63
CD9-210ENST00000543916 TIMM9Q9Y5J7 89 aa11.14□□□□□ -0.63
CD9-210ENST00000543916 TRAV8-2A0A0B4J237 113 aa11.13□□□□□ -0.63
CD9-210ENST00000543916 HMSDA8MTL9 139 aa11.13□□□□□ -0.63
CD9-210ENST00000543916 ISLRO14498 428 aa11.13□□□□□ -0.63
CD9-210ENST00000543916 NHLRC4P0CG21 123 aaPredicted RBP11.13□□□□□ -0.63
CD9-210ENST00000543916 RPL35AP18077 110 aaKnown RBP11.13□□□□□ -0.63
CD9-210ENST00000543916 ATP6V0CP27449 155 aa11.13□□□□□ -0.63
CD9-210ENST00000543916 ID1P41134 155 aa11.13□□□□□ -0.63
CD9-210ENST00000543916 DEFB1P60022 68 aa11.13□□□□□ -0.63
CD9-210ENST00000543916 IGFL4Q6B9Z1 124 aa11.13□□□□□ -0.63
CD9-210ENST00000543916 MIR17HGQ75NE6 70 aa11.13□□□□□ -0.63
CD9-210ENST00000543916 TCTE3Q8IZS6 198 aa11.13□□□□□ -0.63
CD9-210ENST00000543916 C16orf92Q96LL3 132 aa11.13□□□□□ -0.63
CD9-210ENST00000543916 C20orf173Q96LM9 149 aa11.13□□□□□ -0.63
CD9-210ENST00000543916 LINC00052Q96N35 136 aa11.13□□□□□ -0.63
CD9-210ENST00000543916 TM2D3Q9BRN9 247 aa11.13□□□□□ -0.63
CD9-210ENST00000543916 H3BQ15 152 aa11.12□□□□□ -0.63
CD9-210ENST00000543916 H3BTX0 84 aa11.12□□□□□ -0.63
CD9-210ENST00000543916 IGLC2P0DOY2 106 aa11.12□□□□□ -0.63
CD9-210ENST00000543916 ZNF345Q14585 488 aa11.12□□□□□ -0.63
CD9-210ENST00000543916 ACTL10Q5JWF8 245 aa11.12□□□□□ -0.63
CD9-210ENST00000543916 SAMD13Q5VXD3 122 aa11.12□□□□□ -0.63
CD9-210ENST00000543916 KCNRGQ8N5I3 272 aa11.12□□□□□ -0.63
CD9-210ENST00000543916 RNF182Q8N6D2 247 aa11.12□□□□□ -0.63
CD9-210ENST00000543916 FAM167A-AS1Q96KT0 104 aa11.12□□□□□ -0.63
CD9-210ENST00000543916 SLC25A2Q9BXI2 301 aa11.12□□□□□ -0.63
CD9-210ENST00000543916 SH3BGRL3Q9H299 93 aa11.12□□□□□ -0.63
CD9-210ENST00000543916 CYTL1Q9NRR1 136 aa11.12□□□□□ -0.63
CD9-210ENST00000543916 FUT9Q9Y231 359 aa11.12□□□□□ -0.63
CD9-210ENST00000543916 BORCS7-ASMTA0A0B4J1R7 106 aa11.11□□□□□ -0.63
CD9-210ENST00000543916 SLC17A3O00476 420 aa11.11□□□□□ -0.63
CD9-210ENST00000543916 PYYP10082 97 aa11.11□□□□□ -0.63
CD9-210ENST00000543916 CXCL2P19875 107 aa11.11□□□□□ -0.63
CD9-210ENST00000543916 HLA-DMBP28068 263 aa11.11□□□□□ -0.63
CD9-210ENST00000543916 RAB2AP61019 212 aa11.11□□□□□ -0.63
CD9-210ENST00000543916 GDF5OSQ5U4N7 250 aa11.11□□□□□ -0.63
CD9-210ENST00000543916 TRPT1Q86TN4 253 aaKnown RBP11.11□□□□□ -0.63
CD9-210ENST00000543916 STHQ8IWL8 128 aa11.11□□□□□ -0.63
CD9-210ENST00000543916 OR2G3Q8NGZ4 309 aa11.11□□□□□ -0.63
CD9-210ENST00000543916 PSMG3Q9BT73 122 aaPredicted RBP11.11□□□□□ -0.63
CD9-210ENST00000543916 MRPL32Q9BYC8 188 aaKnown RBP11.11□□□□□ -0.63
CD9-210ENST00000543916 RETNQ9HD89 108 aa11.11□□□□□ -0.63
CD9-210ENST00000543916 TMEM14CQ9P0S9 112 aa11.11□□□□□ -0.63
CD9-210ENST00000543916 TAAR5O14804 337 aa11.1□□□□□ -0.63
CD9-210ENST00000543916 M6PRP20645 277 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms