RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 OXA1LQ15070 435 aa9.39□□□□□ -0.91
RTN3-213ENST00000543552 CYP2G1PQ6ZSU1 146 aa9.39□□□□□ -0.91
RTN3-213ENST00000543552 IGF2BP2-AS1Q96M15 143 aa9.39□□□□□ -0.91
RTN3-213ENST00000543552 SRRQ9GZT4 340 aa9.39□□□□□ -0.91
RTN3-213ENST00000543552 PSENENQ9NZ42 101 aa9.39□□□□□ -0.91
RTN3-213ENST00000543552 DKK2Q9UBU2 259 aa9.39□□□□□ -0.91
RTN3-213ENST00000543552 HIGD1AQ9Y241 93 aa9.39□□□□□ -0.91
RTN3-213ENST00000543552 A8MTW9 85 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 FNDC10F2Z333 226 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 HYPMO75409 117 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 ADAP1O75689 374 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 INSP01308 110 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 OR4E1P0C645 316 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 GATA2P23769 480 aaPredicted RBP9.38□□□□□ -0.91
RTN3-213ENST00000543552 B2MP61769 119 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 POLR2GP62487 172 aaKnown RBP eCLIP9.38□□□□□ -0.91
RTN3-213ENST00000543552 CNPY1Q3B7I2 92 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 C4orf46Q504U0 113 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 FAM222AQ5U5X8 452 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 SMIM8Q96KF7 97 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 SHANK2-AS3Q9BTD1 123 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 MGAT4CQ9UBM8 478 aa9.38□□□□□ -0.91
RTN3-213ENST00000543552 H3BRN7 92 aa9.37□□□□□ -0.91
RTN3-213ENST00000543552 LINC00869P0C866 280 aa9.37□□□□□ -0.91
RTN3-213ENST00000543552 DLK1P80370 383 aa9.37□□□□□ -0.91
RTN3-213ENST00000543552 FGL1Q08830 312 aa9.37□□□□□ -0.91
RTN3-213ENST00000543552 UBE2DNLQ8IWF7 75 aa9.37□□□□□ -0.91
RTN3-213ENST00000543552 C1orf158Q8N1D5 194 aa9.37□□□□□ -0.91
RTN3-213ENST00000543552 ZNF738Q8NE65 137 aa9.37□□□□□ -0.91
RTN3-213ENST00000543552 OR10P1Q8NGE3 313 aa9.37□□□□□ -0.91
RTN3-213ENST00000543552 C20orf173Q96LM9 149 aa9.37□□□□□ -0.91
RTN3-213ENST00000543552 SLC25A39Q9BZJ4 359 aaPredicted RBP9.37□□□□□ -0.91
RTN3-213ENST00000543552 RBM38Q9H0Z9 239 aaKnown RBP9.37□□□□□ -0.91
RTN3-213ENST00000543552 YTHDF2Q9Y5A9 579 aaKnown RBP9.37□□□□□ -0.91
RTN3-213ENST00000543552 OR5G3P0C626 314 aa9.36□□□□□ -0.91
RTN3-213ENST00000543552 CNN1P51911 297 aaKnown RBP9.36□□□□□ -0.91
RTN3-213ENST00000543552 TAS2R30P59541 319 aa9.36□□□□□ -0.91
RTN3-213ENST00000543552 PLP1P60201 277 aa9.36□□□□□ -0.91
RTN3-213ENST00000543552 DAD1P61803 113 aa9.36□□□□□ -0.91
RTN3-213ENST00000543552 IAH1Q2TAA2 248 aaPredicted RBP9.36□□□□□ -0.91
RTN3-213ENST00000543552 PXDC1Q5TGL8 231 aa9.36□□□□□ -0.91
RTN3-213ENST00000543552 LRRC20Q8TCA0 184 aa9.36□□□□□ -0.91
RTN3-213ENST00000543552 FAM210AQ96ND0 272 aa9.36□□□□□ -0.91
RTN3-213ENST00000543552 NPVFQ9HCQ7 196 aa9.36□□□□□ -0.91
RTN3-213ENST00000543552 K7EPK0 472 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 TSC22D2O75157 780 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 SCGB1D2O95969 90 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 METTL15P1P0C7V9 234 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 HTN3P15516 51 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 BAK1Q16611 211 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 TEPPQ6URK8 271 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 AMTNQ6UX39 209 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 TMEM14EPQ6UXP3 125 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 TMEM182Q6ZP80 229 aaPredicted RBP9.35□□□□□ -0.91
RTN3-213ENST00000543552 ZNF546Q86UE3 836 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 OR11H7Q8NGC8 314 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 GGACTQ9BVM4 153 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 PPP1R14DQ9NXH3 145 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 HERC2O95714 4834 aa9.35□□□□□ -0.91
RTN3-213ENST00000543552 A0A087X0K7 114 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 LINC00854A0A1B0GVQ3 168 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 LYRM9A8MSI8 78 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 BOLA2-SMG1P6H3BVE0 249 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 CXCL2P19875 107 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 ANXA7P20073 488 aaKnown RBP9.34□□□□□ -0.91
RTN3-213ENST00000543552 TSPOP30536 169 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 RRAS2P62070 204 aaPredicted RBP9.34□□□□□ -0.91
RTN3-213ENST00000543552 ZNF846Q147U1 533 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 SPINK13Q1W4C9 94 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 RNF212Q495C1 297 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 TMEM256Q8N2U0 113 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 RNF182Q8N6D2 247 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 ARL6Q9H0F7 186 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 GSKIPQ9P0R6 139 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 FLVCR2Q9UPI3 526 aa9.34□□□□□ -0.91
RTN3-213ENST00000543552 TRAV8-2A0A0B4J237 113 aa9.33□□□□□ -0.92
RTN3-213ENST00000543552 PMS2P5A8MQ11 134 aa9.33□□□□□ -0.92
RTN3-213ENST00000543552 M0R2Z0 102 aa9.33□□□□□ -0.92
RTN3-213ENST00000543552 GOSR2O14653 212 aa9.33□□□□□ -0.92
RTN3-213ENST00000543552 RHOBP62745 196 aa9.33□□□□□ -0.92
RTN3-213ENST00000543552 LGALS9BQ3B8N2 356 aa9.33□□□□□ -0.92
RTN3-213ENST00000543552 SOHLH1Q5JUK2 328 aa9.33□□□□□ -0.92
RTN3-213ENST00000543552 GSG1LQ6UXU4 331 aa9.33□□□□□ -0.92
RTN3-213ENST00000543552 C15orf53Q8NAA6 179 aa9.33□□□□□ -0.92
RTN3-213ENST00000543552 ZBTB8BQ8NAP8 495 aaPredicted RBP9.33□□□□□ -0.92
RTN3-213ENST00000543552 MITD1Q8WV92 249 aa9.33□□□□□ -0.92
RTN3-213ENST00000543552 C17orf77Q96MU5 243 aa9.33□□□□□ -0.92
RTN3-213ENST00000543552 UHRF2Q96PU4 802 aa9.33□□□□□ -0.92
RTN3-213ENST00000543552 DNAH2Q9P225 4427 aa9.33□□□□□ -0.92
RTN3-213ENST00000543552 FAT2Q9NYQ8 4349 aa9.32□□□□□ -0.92
RTN3-213ENST00000543552 PKHD1P08F94 4074 aa9.32□□□□□ -0.92
RTN3-213ENST00000543552 L7N2F9 121 aa9.32□□□□□ -0.92
RTN3-213ENST00000543552 IL7P13232 177 aa9.32□□□□□ -0.92
RTN3-213ENST00000543552 CXCL3P19876 107 aa9.32□□□□□ -0.92
RTN3-213ENST00000543552 VAMP2P63027 116 aa9.32□□□□□ -0.92
RTN3-213ENST00000543552 HIST1H1AQ02539 215 aaPredicted RBP9.32□□□□□ -0.92
RTN3-213ENST00000543552 RAB31Q13636 194 aa9.32□□□□□ -0.92
RTN3-213ENST00000543552 PSG3Q16557 428 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 1122.9 ms