RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	FAM122C	Q6P4D5	195 aa		7.67	□□□□□ -1.18
CPSF7-221	ENST00000543545	SIGLEC15	Q6ZMC9	328 aa		7.67	□□□□□ -1.18
CPSF7-221	ENST00000543545	SLC51B	Q86UW2	128 aa		7.67	□□□□□ -1.18
CPSF7-221	ENST00000543545	BAP18	Q8IXM2	172 aa		7.67	□□□□□ -1.18
CPSF7-221	ENST00000543545	TMEM61	Q8N0U2	210 aa		7.67	□□□□□ -1.18
CPSF7-221	ENST00000543545	STXBP6	Q8NFX7	210 aa		7.67	□□□□□ -1.18
CPSF7-221	ENST00000543545	OR10G4	Q8NGN3	311 aa		7.67	□□□□□ -1.18
CPSF7-221	ENST00000543545	OR10G9	Q8NGN4	311 aa		7.67	□□□□□ -1.18
CPSF7-221	ENST00000543545	OR10G7	Q8NGN6	311 aa		7.67	□□□□□ -1.18
CPSF7-221	ENST00000543545	OR2K2	Q8NGT1	345 aa		7.67	□□□□□ -1.18
CPSF7-221	ENST00000543545	BOLA1	Q9Y3E2	137 aa		7.67	□□□□□ -1.18
CPSF7-221	ENST00000543545	IZUMO1R	A6ND01	250 aa		7.66	□□□□□ -1.18
CPSF7-221	ENST00000543545	RPL7	P18124	248 aa	Known RBP	7.66	□□□□□ -1.18
CPSF7-221	ENST00000543545	ATF4	P18848	351 aa	Predicted RBP	7.66	□□□□□ -1.18
CPSF7-221	ENST00000543545	RHOB	P62745	196 aa		7.66	□□□□□ -1.18
CPSF7-221	ENST00000543545	TMEM41B	Q5BJD5	291 aa		7.66	□□□□□ -1.18
CPSF7-221	ENST00000543545	SAMD5	Q5TGI4	173 aa		7.66	□□□□□ -1.18
CPSF7-221	ENST00000543545	SPATA31B1P	Q5VZV4	182 aa		7.66	□□□□□ -1.18
CPSF7-221	ENST00000543545	EIF5AL1	Q6IS14	154 aa	Known RBP	7.66	□□□□□ -1.18
CPSF7-221	ENST00000543545	MIR17HG	Q75NE6	70 aa		7.66	□□□□□ -1.18
CPSF7-221	ENST00000543545	GLMP	Q8WWB7	406 aa		7.66	□□□□□ -1.18
CPSF7-221	ENST00000543545	GPR82	Q96P67	336 aa		7.66	□□□□□ -1.18
CPSF7-221	ENST00000543545	SEPSECS	Q9HD40	501 aa	Known RBP	7.66	□□□□□ -1.18
CPSF7-221	ENST00000543545	FUT9	Q9Y231	359 aa		7.66	□□□□□ -1.18
CPSF7-221	ENST00000543545	TSPAN4	O14817	238 aa		7.65	□□□□□ -1.18
CPSF7-221	ENST00000543545	SEC11B	P0C7V7	166 aa		7.65	□□□□□ -1.18
CPSF7-221	ENST00000543545	SPP1	P10451	314 aa		7.65	□□□□□ -1.18
CPSF7-221	ENST00000543545	GP9	P14770	177 aa		7.65	□□□□□ -1.18
CPSF7-221	ENST00000543545	TAS2R45	P59539	299 aa		7.65	□□□□□ -1.18
CPSF7-221	ENST00000543545	FAM90A2P	Q658T7	463 aa		7.65	□□□□□ -1.18
CPSF7-221	ENST00000543545	BPIFA4P	Q86YQ2	179 aa		7.65	□□□□□ -1.18
CPSF7-221	ENST00000543545	STOML3	Q8TAV4	291 aa		7.65	□□□□□ -1.18
CPSF7-221	ENST00000543545	TMED6	Q8WW62	240 aa		7.65	□□□□□ -1.18
CPSF7-221	ENST00000543545	SPAG8	Q99932	426 aa	Predicted RBP	7.65	□□□□□ -1.18
CPSF7-221	ENST00000543545	MRPL32	Q9BYC8	188 aa	Known RBP	7.65	□□□□□ -1.18
CPSF7-221	ENST00000543545	ACTR3C	Q9C0K3	210 aa	Predicted RBP	7.65	□□□□□ -1.18
CPSF7-221	ENST00000543545	ZNF256	Q9Y2P7	627 aa	Predicted RBP	7.65	□□□□□ -1.18
CPSF7-221	ENST00000543545	OR4C46	A6NHA9	309 aa		7.64	□□□□□ -1.19
CPSF7-221	ENST00000543545	HMGB3	O15347	200 aa	Known RBP	7.64	□□□□□ -1.19
CPSF7-221	ENST00000543545	OR7C2	O60412	319 aa		7.64	□□□□□ -1.19
CPSF7-221	ENST00000543545	EIF3G	O75821	320 aa	Known RBP eCLIP	7.64	□□□□□ -1.19
CPSF7-221	ENST00000543545	SNRPC	P09234	159 aa	Known RBP	7.64	□□□□□ -1.19
CPSF7-221	ENST00000543545	CDC34	P49427	236 aa	Predicted RBP	7.64	□□□□□ -1.19
CPSF7-221	ENST00000543545	MORN5	Q5VZ52	161 aa		7.64	□□□□□ -1.19
CPSF7-221	ENST00000543545	LRRC20	Q8TCA0	184 aa		7.64	□□□□□ -1.19
CPSF7-221	ENST00000543545	MS4A6A	Q9H2W1	248 aa		7.64	□□□□□ -1.19
CPSF7-221	ENST00000543545	RPRM	Q9NS64	109 aa		7.64	□□□□□ -1.19
CPSF7-221	ENST00000543545	UMAD1	C9J7I0	102 aa		7.63	□□□□□ -1.19
CPSF7-221	ENST00000543545	WIPF1	O43516	503 aa		7.63	□□□□□ -1.19
CPSF7-221	ENST00000543545	KRTAP10-11	P60412	298 aa		7.63	□□□□□ -1.19
CPSF7-221	ENST00000543545	KHDC3L	Q587J8	217 aa		7.63	□□□□□ -1.19
CPSF7-221	ENST00000543545	GTSCR1	Q86UQ5	136 aa		7.63	□□□□□ -1.19
CPSF7-221	ENST00000543545	RAB24	Q969Q5	203 aa		7.63	□□□□□ -1.19
CPSF7-221	ENST00000543545	PRR25	Q96S07	402 aa		7.63	□□□□□ -1.19
CPSF7-221	ENST00000543545	PAXX	Q9BUH6	204 aa		7.63	□□□□□ -1.19
CPSF7-221	ENST00000543545	SLC25A2	Q9BXI2	301 aa		7.63	□□□□□ -1.19
CPSF7-221	ENST00000543545	OR51M1	Q9H341	326 aa		7.63	□□□□□ -1.19
CPSF7-221	ENST00000543545	NRN1	Q9NPD7	142 aa		7.63	□□□□□ -1.19
CPSF7-221	ENST00000543545	SMAD5-AS1	Q9Y6J3	95 aa		7.63	□□□□□ -1.19
CPSF7-221	ENST00000543545	CMYA5	Q8N3K9	4069 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	VWF	P04275	2813 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545		H3BTX0	84 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	OR10J4	P0C629	311 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	PYY	P10082	97 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	ID1	P41134	155 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	MEOX2	P50222	304 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	CD81	P60033	236 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	EGFEM1P	Q0D2K5	195 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	LCN15	Q6UWW0	184 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	IQCF2	Q8IXL9	164 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	RPP25L	Q8N5L8	163 aa	Known RBP	7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	FAM213B	Q8TBF2	198 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	BLNK	Q8WV28	456 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	C16orf92	Q96LL3	132 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	LINC00052	Q96N35	136 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	TMEM14C	Q9P0S9	112 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	MGAM2	Q2M2H8	2515 aa		7.62	□□□□□ -1.19
CPSF7-221	ENST00000543545	TRAV2	A0A0B4J234	112 aa		7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	CTXND1	A0A1B0GTU2	59 aa		7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	PRB2	P02812	416 aa	Predicted RBP	7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	ZNF688	P0C7X2	276 aa		7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	HIST1H1E	P10412	219 aa	Known RBP	7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	FHIT	P49789	147 aa		7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	RAB5C	P51148	216 aa		7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	CMC4	P56277	68 aa	Predicted RBP	7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	SNRPD3	P62318	126 aa	Known RBP	7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	UBE2L3	P68036	154 aa	Known RBP	7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	BEAN1	Q3B7T3	259 aa		7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	SAMD13	Q5VXD3	122 aa		7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	RNF141	Q8WVD5	230 aa		7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	FAM167A-AS1	Q96KT0	104 aa		7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	PLA2G2E	Q9NZK7	142 aa		7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545	UBQLN2	Q9UHD9	624 aa		7.61	□□□□□ -1.19
CPSF7-221	ENST00000543545		A0A087X0K7	114 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545		H3BQ15	152 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545		K7EQG2	157 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	MRPS12	O15235	138 aa	Known RBP	7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	CXorf1	O96002	111 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	CD7	P09564	240 aa		7.6	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms