RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 IL5P05113 134 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 SLC25A6P12236 298 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 SNCAP37840 140 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 SUB1P53999 127 aaKnown RBP eCLIP3.92□□□□□ -1.78
CLIP1-217ENST00000543205 RHOGP84095 191 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 WT1-ASQ06250 92 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 ADAMTSL5Q6ZMM2 481 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 C18orf65Q6ZTR6 163 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 FAM223AQ8IWN6 122 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 C12orf45Q8N5I9 185 aaPredicted RBP3.92□□□□□ -1.78
CLIP1-217ENST00000543205 ZNF738Q8NE65 137 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 MYOZ3Q8TDC0 251 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 C4orf3Q8WVX3 66 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 OR5B12Q96R08 314 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 NIPSNAP3BQ9BS92 247 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 MARVELD1Q9BSK0 173 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 FNDC4Q9H6D8 234 aaPredicted RBP3.92□□□□□ -1.78
CLIP1-217ENST00000543205 MSRB1Q9NZV6 116 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 THYN1Q9P016 225 aa3.92□□□□□ -1.78
CLIP1-217ENST00000543205 PLXNB1O43157 2135 aa3.91□□□□□ -1.78
CLIP1-217ENST00000543205 MED6O75586 246 aa3.91□□□□□ -1.78
CLIP1-217ENST00000543205 SPNP16150 400 aa3.91□□□□□ -1.78
CLIP1-217ENST00000543205 ZP3P21754 424 aa3.91□□□□□ -1.78
CLIP1-217ENST00000543205 HOXD3P31249 432 aaPredicted RBP3.91□□□□□ -1.78
CLIP1-217ENST00000543205 DEFA5Q01523 94 aa3.91□□□□□ -1.78
CLIP1-217ENST00000543205 TNFRSF9Q07011 255 aa3.91□□□□□ -1.78
CLIP1-217ENST00000543205 KIAA0141Q14154 515 aaPredicted RBP3.91□□□□□ -1.78
CLIP1-217ENST00000543205 C15orf32Q32M92 178 aa3.91□□□□□ -1.78
CLIP1-217ENST00000543205 CSTL1Q9H114 145 aa3.91□□□□□ -1.78
CLIP1-217ENST00000543205 GNB4Q9HAV0 340 aa3.91□□□□□ -1.78
CLIP1-217ENST00000543205 C11orf21Q9P2W6 132 aa3.91□□□□□ -1.78
CLIP1-217ENST00000543205 F11RQ9Y624 299 aaKnown RBP3.91□□□□□ -1.78
CLIP1-217ENST00000543205 IGLV11-55A0A075B6I3 123 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 A0A087WZ39 114 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 SNRPGP15A8MWD9 76 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 INS-IGF2F8WCM5 200 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 I3L521 148 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 NDUFB8O95169 186 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 LGALS1P09382 135 aaKnown RBP3.9□□□□□ -1.78
CLIP1-217ENST00000543205 MYCNOSP40205 109 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 HAGHQ16775 308 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 IAH1Q2TAA2 248 aaPredicted RBP3.9□□□□□ -1.78
CLIP1-217ENST00000543205 ACTL10Q5JWF8 245 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 OR11H1Q8NG94 326 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 OR1N2Q8NGR9 330 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 OR1P1Q8NH06 330 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 EEF1AKMT3Q96AZ1 226 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 P2RX4Q99571 388 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 RBKSQ9H477 322 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 GSKIPQ9P0R6 139 aa3.9□□□□□ -1.78
CLIP1-217ENST00000543205 TET2Q6N021 2002 aaPredicted RBP3.9□□□□□ -1.78
CLIP1-217ENST00000543205 TRBV7-1A0A0A6YYK4 115 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 MPTX1A8MV57 137 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 LINC01619G3V211 115 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 SSNA1O43805 119 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 PITX3O75364 302 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 IFNA10P01566 189 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 HSPB1P04792 205 aaKnown RBP3.9□□□□□ -1.79
CLIP1-217ENST00000543205 OR8U8P0C7N1 319 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 RUNX1Q01196 453 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 ZNF616Q08AN1 781 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 KLK9Q2XQG4 91 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 DEFB136Q30KP8 78 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 ATRAIDQ6UW56 229 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 GSG1LQ6UXU4 331 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 ZNF114Q8NC26 417 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 GATAD1Q8WUU5 269 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 OR10C1Q96KK4 312 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 DUX3Q96PT4 197 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 CIB3Q96Q77 187 aaPredicted RBP3.9□□□□□ -1.79
CLIP1-217ENST00000543205 KLK9Q9UKQ9 250 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 U3KQ87 197 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 TNCP24821 2201 aa3.9□□□□□ -1.79
CLIP1-217ENST00000543205 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.89□□□□□ -1.79
CLIP1-217ENST00000543205 IGHV3-21A0A0B4J1V1 117 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 TRBV7-9A0A0J9YWB2 115 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 CORTO00230 105 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 SYNGR2O43760 224 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 MPDU1O75352 247 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 IGHV3-23P01764 117 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 RNASE2P10153 161 aaKnown RBP3.89□□□□□ -1.79
CLIP1-217ENST00000543205 IAPPP10997 89 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 MFAP2P55001 183 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 TAL2Q16559 108 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 ATP6V1FQ16864 119 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 ZNF343Q6P1L6 599 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 VN1R17PQ8TDU5 208 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 C2orf50Q96LR7 162 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 PAIP2BQ9ULR5 123 aaKnown RBP3.89□□□□□ -1.79
CLIP1-217ENST00000543205 S4R3C0 116 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 TENM1Q9UKZ4 2725 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 NBEAL2Q6ZNJ1 2754 aa3.89□□□□□ -1.79
CLIP1-217ENST00000543205 IGHV4OR15-8A0A075B7B6 117 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 A0A087WW49 117 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 RPS10-NUDT3A0A1W2PQS6 291 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 TGOLN2O43493 480 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 SSSCA1O60232 199 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 MT-CO2P00403 227 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 SLPIP03973 132 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 NPY1RP25929 384 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms